RNA–Protein interactions for RNA: ENST00000619368.4

RDM1-225, Transcript of RAD52 motif containing 1, humanhuman

TSL 1 (best)

Gene RDM1, Length 506 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-225ENST00000619368 RUNDC1Q96C34 613 aa11.83□□□□□ -0.52
RDM1-225ENST00000619368 GPRC5DQ9NZD1 345 aa11.83□□□□□ -0.52
RDM1-225ENST00000619368 ADAMTS8Q9UP79 889 aa11.83□□□□□ -0.52
RDM1-225ENST00000619368 COL4A1P02462 1669 aa11.83□□□□□ -0.52
RDM1-225ENST00000619368 DUOX1Q9NRD9 1551 aa11.83□□□□□ -0.52
RDM1-225ENST00000619368 WDR33Q9C0J8 1336 aaKnown RBP11.83□□□□□ -0.52
RDM1-225ENST00000619368 CTCFP49711 727 aaPredicted RBP11.82□□□□□ -0.52
RDM1-225ENST00000619368 GMPSP49915 693 aaPredicted RBP11.82□□□□□ -0.52
RDM1-225ENST00000619368 GRAPQ13588 217 aa11.82□□□□□ -0.52
RDM1-225ENST00000619368 CST9Q5W186 159 aa11.82□□□□□ -0.52
RDM1-225ENST00000619368 DDX46Q7L014 1031 aaKnown RBP11.82□□□□□ -0.52
RDM1-225ENST00000619368 GRAPLQ8TC17 118 aaPredicted RBP11.82□□□□□ -0.52
RDM1-225ENST00000619368 PRDM10Q9NQV6 1147 aa11.82□□□□□ -0.52
RDM1-225ENST00000619368 ATP5J2-PTCD1G3V325 749 aa11.81□□□□□ -0.52
RDM1-225ENST00000619368 LBX1P52954 281 aa11.81□□□□□ -0.52
RDM1-225ENST00000619368 KIAA2012Q0VF49 1180 aa11.81□□□□□ -0.52
RDM1-225ENST00000619368 WDR43Q15061 677 aaKnown RBP eCLIP11.81□□□□□ -0.52
RDM1-225ENST00000619368 HDGFL1Q5TGJ6 251 aa11.81□□□□□ -0.52
RDM1-225ENST00000619368 ANKRD13DQ6ZTN6 518 aa11.81□□□□□ -0.52
RDM1-225ENST00000619368 PLBD2Q8NHP8 589 aa11.81□□□□□ -0.52
RDM1-225ENST00000619368 AIDAQ96BJ3 306 aa11.81□□□□□ -0.52
RDM1-225ENST00000619368 FAM89AQ96GI7 184 aa11.81□□□□□ -0.52
RDM1-225ENST00000619368 ISCA1Q9BUE6 129 aa11.81□□□□□ -0.52
RDM1-225ENST00000619368 ADARB2Q9NS39 739 aaKnown RBP11.81□□□□□ -0.52
RDM1-225ENST00000619368 THSD7BQ9C0I4 1608 aa11.81□□□□□ -0.52
RDM1-225ENST00000619368 YDJCA8MPS7 323 aa11.8□□□□□ -0.52
RDM1-225ENST00000619368 RAD17O75943 681 aa11.8□□□□□ -0.52
RDM1-225ENST00000619368 HOXB7P09629 217 aa11.8□□□□□ -0.52
RDM1-225ENST00000619368 CIAPIN1Q6FI81 312 aa11.8□□□□□ -0.52
RDM1-225ENST00000619368 DBF4Q9UBU7 674 aaPredicted RBP11.8□□□□□ -0.52
RDM1-225ENST00000619368 SHTN1A0MZ66 631 aa11.79□□□□□ -0.52
RDM1-225ENST00000619368 HSPA8P11142 646 aaKnown RBP11.79□□□□□ -0.52
RDM1-225ENST00000619368 HIRAP54198 1017 aaPredicted RBP11.79□□□□□ -0.52
RDM1-225ENST00000619368 RTL5Q5HYW3 569 aaPredicted RBP11.79□□□□□ -0.52
RDM1-225ENST00000619368 DUSP27Q5VZP5 1158 aa11.79□□□□□ -0.52
RDM1-225ENST00000619368 CYP4F22Q6NT55 531 aa11.79□□□□□ -0.52
RDM1-225ENST00000619368 CELF1Q92879 486 aaKnown RBP11.79□□□□□ -0.52
RDM1-225ENST00000619368 CAPNS2Q96L46 248 aa11.79□□□□□ -0.52
RDM1-225ENST00000619368 CFAP44Q96MT7 982 aa11.79□□□□□ -0.52
RDM1-225ENST00000619368 MBIPQ9NS73 344 aa11.79□□□□□ -0.52
RDM1-225ENST00000619368 PGAP2Q9UHJ9 254 aa11.79□□□□□ -0.52
RDM1-225ENST00000619368 SCN9AQ15858 1988 aa11.79□□□□□ -0.52
RDM1-225ENST00000619368 MAP2K1Q02750 393 aaPredicted RBP11.78□□□□□ -0.52
RDM1-225ENST00000619368 GRM1Q13255 1194 aa11.78□□□□□ -0.52
RDM1-225ENST00000619368 TNIP1Q15025 636 aa11.78□□□□□ -0.52
RDM1-225ENST00000619368 SF3B3Q15393 1217 aaKnown RBP11.78□□□□□ -0.52
RDM1-225ENST00000619368 PAXIP1Q6ZW49 1069 aaPredicted RBP11.78□□□□□ -0.52
RDM1-225ENST00000619368 TMC4Q7Z404 712 aa11.78□□□□□ -0.52
RDM1-225ENST00000619368 BCL2L13Q9BXK5 485 aa11.78□□□□□ -0.52
RDM1-225ENST00000619368 GLIS2Q9BZE0 524 aaPredicted RBP11.78□□□□□ -0.52
RDM1-225ENST00000619368 HYPKQ9NX55 129 aa11.78□□□□□ -0.52
RDM1-225ENST00000619368 CNOT7Q9UIV1 285 aaKnown RBP11.78□□□□□ -0.52
RDM1-225ENST00000619368 TLL2Q9Y6L7 1015 aa11.78□□□□□ -0.52
RDM1-225ENST00000619368 ZNF853P0CG23 659 aa11.77□□□□□ -0.53
RDM1-225ENST00000619368 GPSM2P81274 684 aa11.77□□□□□ -0.53
RDM1-225ENST00000619368 TRPM4Q8TD43 1214 aa11.77□□□□□ -0.53
RDM1-225ENST00000619368 POLLQ9UGP5 575 aa11.77□□□□□ -0.53
RDM1-225ENST00000619368 NSFL1CQ9UNZ2 370 aaKnown RBP11.77□□□□□ -0.53
RDM1-225ENST00000619368 ZBTB12Q9Y330 459 aaPredicted RBP11.77□□□□□ -0.53
RDM1-225ENST00000619368 CASP8AP2Q9UKL3 1982 aa11.77□□□□□ -0.53
RDM1-225ENST00000619368 CDHR2Q9BYE9 1310 aa11.77□□□□□ -0.53
RDM1-225ENST00000619368 ELL2O00472 640 aaPredicted RBP11.76□□□□□ -0.53
RDM1-225ENST00000619368 IRS4O14654 1257 aaPredicted RBP11.76□□□□□ -0.53
RDM1-225ENST00000619368 APAF1O14727 1248 aa11.76□□□□□ -0.53
RDM1-225ENST00000619368 RIMBP2O15034 1052 aa11.76□□□□□ -0.53
RDM1-225ENST00000619368 CELF2O95319 508 aaKnown RBP11.76□□□□□ -0.53
RDM1-225ENST00000619368 ECE1P42892 770 aa11.76□□□□□ -0.53
RDM1-225ENST00000619368 TRIM28Q13263 835 aaKnown RBP11.76□□□□□ -0.53
RDM1-225ENST00000619368 WASHC4Q2M389 1173 aa11.76□□□□□ -0.53
RDM1-225ENST00000619368 SAPCD2Q86UD0 394 aa11.76□□□□□ -0.53
RDM1-225ENST00000619368 GPR101Q96P66 508 aaPredicted RBP11.76□□□□□ -0.53
RDM1-225ENST00000619368 PHAXQ9H814 394 aaKnown RBP11.76□□□□□ -0.53
RDM1-225ENST00000619368 PRKRIP1Q9H875 184 aaPredicted RBP11.76□□□□□ -0.53
RDM1-225ENST00000619368 DBNDD1Q9H9R9 158 aa11.76□□□□□ -0.53
RDM1-225ENST00000619368 KCNQ5Q9NR82 932 aa11.76□□□□□ -0.53
RDM1-225ENST00000619368 C6orf229H3BNL8 230 aa11.75□□□□□ -0.53
RDM1-225ENST00000619368 H7C1D1 291 aa11.75□□□□□ -0.53
RDM1-225ENST00000619368 PSMD14O00487 310 aa11.75□□□□□ -0.53
RDM1-225ENST00000619368 AOC2O75106 756 aa11.75□□□□□ -0.53
RDM1-225ENST00000619368 DLK2Q6UY11 383 aa11.75□□□□□ -0.53
RDM1-225ENST00000619368 SAMD7Q7Z3H4 446 aa11.75□□□□□ -0.53
RDM1-225ENST00000619368 RIC3Q7Z5B4 369 aa11.75□□□□□ -0.53
RDM1-225ENST00000619368 MICALL2Q8IY33 904 aa11.75□□□□□ -0.53
RDM1-225ENST00000619368 ZC3H15Q8WU90 426 aaKnown RBP11.75□□□□□ -0.53
RDM1-225ENST00000619368 PSME4Q14997 1843 aa11.74□□□□□ -0.53
RDM1-225ENST00000619368 MYH3P11055 1940 aa11.74□□□□□ -0.53
RDM1-225ENST00000619368 EGFRP00533 1210 aa11.74□□□□□ -0.53
RDM1-225ENST00000619368 RPS8P62241 208 aaKnown RBP11.74□□□□□ -0.53
RDM1-225ENST00000619368 DOK7Q18PE1 504 aa11.74□□□□□ -0.53
RDM1-225ENST00000619368 CDC37L1Q7L3B6 337 aa11.74□□□□□ -0.53
RDM1-225ENST00000619368 ZBTB38Q8NAP3 1195 aaPredicted RBP11.74□□□□□ -0.53
RDM1-225ENST00000619368 C8orf58Q8NAV2 365 aa11.74□□□□□ -0.53
RDM1-225ENST00000619368 TBC1D16Q8TBP0 767 aa11.74□□□□□ -0.53
RDM1-225ENST00000619368 JARID2Q92833 1246 aaPredicted RBP11.74□□□□□ -0.53
RDM1-225ENST00000619368 ZNF408Q9H9D4 720 aa11.74□□□□□ -0.53
RDM1-225ENST00000619368 SEC31BQ9NQW1 1179 aa11.74□□□□□ -0.53
RDM1-225ENST00000619368 IFT57Q9NWB7 429 aa11.74□□□□□ -0.53
RDM1-225ENST00000619368 SPEF2Q9C093 1822 aa11.74□□□□□ -0.53
RDM1-225ENST00000619368 ECE2O60344 883 aa11.73□□□□□ -0.53
RDM1-225ENST00000619368 MAP2K2P36507 400 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms