RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 CEP112Q8N8E3 955 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 PIBF1Q8WXW3 757 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 CTAGE9A4FU28 777 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 BRD1O95696 1058 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 CCDC172P0C7W6 258 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 TDO2P48775 406 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 ZFYVE27Q5T4F4 411 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 CTR9Q6PD62 1173 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 PPP1R12BO60237 982 aaPredicted RBP3.51□□□□□ -1.85
LPP-221ENST00000618621 GADD45BO75293 160 aaPredicted RBP3.51□□□□□ -1.85
LPP-221ENST00000618621 CETN1Q12798 172 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 EPRSP07814 1512 aaKnown RBP3.51□□□□□ -1.85
LPP-221ENST00000618621 HMGXB3Q12766 1538 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 GTF2F1P35269 517 aaKnown RBP eCLIP3.51□□□□□ -1.853e-6■■■■□ 22.4
LPP-221ENST00000618621 GTF2A1P52655 376 aaPredicted RBP3.51□□□□□ -1.85
LPP-221ENST00000618621 ARFGAP3Q9NP61 516 aa3.51□□□□□ -1.85
LPP-221ENST00000618621 ACEP12821 1306 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 NCOA7Q8NI08 942 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 PTCD1O75127 700 aaKnown RBP3.5□□□□□ -1.85
LPP-221ENST00000618621 IFI16Q16666 785 aaKnown RBP3.5□□□□□ -1.85
LPP-221ENST00000618621 ALS2CR12Q96Q35 445 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 GRIN2AQ12879 1464 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 CTAGE15A4D2H0 777 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 CTAGE8P0CG41 777 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 CTAGE6Q86UF2 777 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 CTAGE4Q8IX94 777 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 KRT23Q9C075 422 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 CCDC8Q9H0W5 538 aaPredicted RBP3.5□□□□□ -1.85
LPP-221ENST00000618621 GIMAP7Q8NHV1 300 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 TMEM63CQ9P1W3 806 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 NSD3Q9BZ95 1437 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 RIOK3O14730 519 aaKnown RBP3.5□□□□□ -1.85
LPP-221ENST00000618621 ALDH1L1O75891 902 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 SYKP43405 635 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 CKAP4Q07065 602 aaKnown RBP3.5□□□□□ -1.85
LPP-221ENST00000618621 NUP88Q99567 741 aaPredicted RBP3.5□□□□□ -1.85
LPP-221ENST00000618621 MKNK2Q9HBH9 465 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 TRAPPC8Q9Y2L5 1435 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 KCNA6P17658 529 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 MFSD6Q6ZSS7 791 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 HOOK3Q86VS8 718 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 TEX13AQ9BXU3 409 aaPredicted RBP3.5□□□□□ -1.85
LPP-221ENST00000618621 SHTN1A0MZ66 631 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 CD2BP2O95400 341 aaKnown RBP3.5□□□□□ -1.85
LPP-221ENST00000618621 FLIIQ13045 1269 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 KSR2Q6VAB6 950 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 GOLGA1Q92805 767 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 JARID2Q92833 1246 aaPredicted RBP3.5□□□□□ -1.85
LPP-221ENST00000618621 ZHX3Q9H4I2 956 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 DDX17Q92841 729 aaKnown RBP3.5□□□□□ -1.85
LPP-221ENST00000618621 MEIS3Q99687 375 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 TCP11L1Q9NUJ3 509 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 GJB2P29033 226 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 LMAN1P49257 510 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 IFFO1Q0D2I5 559 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 SLF2Q8IX21 1173 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 ANKRD24Q8TF21 1146 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 RAB34Q9BZG1 259 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 MAGI1Q96QZ7 1491 aaPredicted RBP3.5□□□□□ -1.85
LPP-221ENST00000618621 POLR3DP05423 398 aaPredicted RBP3.5□□□□□ -1.85
LPP-221ENST00000618621 NBPF7P0C2Y1 421 aaPredicted RBP3.5□□□□□ -1.85
LPP-221ENST00000618621 CCT2P78371 535 aaKnown RBP3.5□□□□□ -1.85
LPP-221ENST00000618621 SPTY2D1Q68D10 685 aaPredicted RBP3.5□□□□□ -1.85
LPP-221ENST00000618621 KLHL10Q6JEL2 608 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 CEP85Q6P2H3 762 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 MPRIPQ6WCQ1 1025 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 FAM114A1Q8IWE2 563 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 NGLY1Q96IV0 654 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 UTP14CQ5TAP6 766 aaKnown RBP3.5□□□□□ -1.85
LPP-221ENST00000618621 TAX1BP1Q86VP1 789 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 TSGA10Q9BZW7 698 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 TAOK3Q9H2K8 898 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 DACT1Q9NYF0 836 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 GOLGA6L10A0A0M3HER8 536 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 N4BP3O15049 544 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 CLEC17AQ6ZS10 378 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 RBM28Q9NW13 759 aaKnown RBP3.5□□□□□ -1.85
LPP-221ENST00000618621 MAP3K2Q9Y2U5 619 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 SGSM3Q96HU1 749 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 CHL1O00533 1208 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 SNW1Q13573 536 aaKnown RBP3.5□□□□□ -1.85
LPP-221ENST00000618621 DYDC1Q8WWB3 177 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 CHAMP1Q96JM3 812 aa3.5□□□□□ -1.85
LPP-221ENST00000618621 GNAQP50148 359 aa3.49□□□□□ -1.85
LPP-221ENST00000618621 POLKQ9UBT6 870 aa3.49□□□□□ -1.85
LPP-221ENST00000618621 TMEM67Q5HYA8 995 aa3.49□□□□□ -1.85
LPP-221ENST00000618621 CPLX3Q8WVH0 158 aa3.49□□□□□ -1.85
LPP-221ENST00000618621 ORAI2Q96SN7 254 aa3.49□□□□□ -1.85
LPP-221ENST00000618621 SELENOOQ9BVL4 669 aa3.49□□□□□ -1.85
LPP-221ENST00000618621 SP100P23497 879 aaPredicted RBP3.49□□□□□ -1.85
LPP-221ENST00000618621 ERBB4Q15303 1308 aa3.49□□□□□ -1.85
LPP-221ENST00000618621 PI4KAP2A4QPH2 592 aa3.49□□□□□ -1.85
LPP-221ENST00000618621 RBM26Q5T8P6 1007 aaKnown RBP3.49□□□□□ -1.85
LPP-221ENST00000618621 CREB3L3Q68CJ9 461 aa3.49□□□□□ -1.85
LPP-221ENST00000618621 PI4KAP1Q8N8J0 262 aa3.49□□□□□ -1.85
LPP-221ENST00000618621 RHPN1Q8TCX5 695 aa3.49□□□□□ -1.85
LPP-221ENST00000618621 CCDC85AQ96PX6 553 aaPredicted RBP3.49□□□□□ -1.85
LPP-221ENST00000618621 MYD88Q99836 296 aa3.49□□□□□ -1.85
LPP-221ENST00000618621 TOP2BQ02880 1626 aa3.49□□□□□ -1.85
LPP-221ENST00000618621 GPBP1L1Q9HC44 474 aaPredicted RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms