RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 PDE8AO60658 829 aa31.73■■■□□ 2.67
PMS1-220ENST00000618056 TMC4Q7Z404 712 aa31.72■■■□□ 2.67
PMS1-220ENST00000618056 TMX4Q9H1E5 349 aaPredicted RBP31.72■■■□□ 2.67
PMS1-220ENST00000618056 GCKRQ14397 625 aa31.72■■■□□ 2.67
PMS1-220ENST00000618056 SP8Q8IXZ3 490 aa31.72■■■□□ 2.67
PMS1-220ENST00000618056 ZNF277Q9NRM2 450 aaPredicted RBP31.72■■■□□ 2.67
PMS1-220ENST00000618056 GLTPD2A6NH11 291 aa31.71■■■□□ 2.67
PMS1-220ENST00000618056 SLC51AQ86UW1 340 aa31.71■■■□□ 2.67
PMS1-220ENST00000618056 JARID2Q92833 1246 aaPredicted RBP31.71■■■□□ 2.67
PMS1-220ENST00000618056 H7C1W4 665 aa31.7■■■□□ 2.66
PMS1-220ENST00000618056 KIF3CO14782 793 aa31.7■■■□□ 2.66
PMS1-220ENST00000618056 F6X3S4 739 aa31.69■■■□□ 2.66
PMS1-220ENST00000618056 CT47B1P0C2W7 299 aaPredicted RBP31.69■■■□□ 2.66
PMS1-220ENST00000618056 IARSP41252 1262 aaKnown RBP31.69■■■□□ 2.66
PMS1-220ENST00000618056 MRPL50Q8N5N7 158 aaKnown RBP31.69■■■□□ 2.66
PMS1-220ENST00000618056 NMRK2Q9NPI5 230 aa31.69■■■□□ 2.66
PMS1-220ENST00000618056 COL4A1P02462 1669 aa31.69■■■□□ 2.66
PMS1-220ENST00000618056 CCDC152Q4G0S7 254 aa31.68■■■□□ 2.66
PMS1-220ENST00000618056 CELF1Q92879 486 aaKnown RBP31.68■■■□□ 2.66
PMS1-220ENST00000618056 BEND3Q5T5X7 828 aa31.67■■■□□ 2.66
PMS1-220ENST00000618056 C1QTNF8P60827 252 aa31.66■■■□□ 2.66
PMS1-220ENST00000618056 ALDH1L2Q3SY69 923 aa31.66■■■□□ 2.66
PMS1-220ENST00000618056 DPY19L2Q6NUT2 758 aa31.66■■■□□ 2.66
PMS1-220ENST00000618056 UBE3BQ7Z3V4 1068 aa31.66■■■□□ 2.66
PMS1-220ENST00000618056 SSH1Q8WYL5 1049 aa31.66■■■□□ 2.66
PMS1-220ENST00000618056 WDR90Q96KV7 1748 aa31.66■■■□□ 2.66
PMS1-220ENST00000618056 CASP7P55210 303 aa31.65■■■□□ 2.66
PMS1-220ENST00000618056 CTSWP56202 376 aa31.65■■■□□ 2.66
PMS1-220ENST00000618056 RTFDC1Q9BY42 306 aaPredicted RBP31.65■■■□□ 2.66
PMS1-220ENST00000618056 RPS8P62241 208 aaKnown RBP31.64■■■□□ 2.66
PMS1-220ENST00000618056 PLA2G12BQ9BX93 195 aa31.64■■■□□ 2.66
PMS1-220ENST00000618056 VPS33BQ9H267 617 aa31.64■■■□□ 2.66
PMS1-220ENST00000618056 PTPRCP08575 1304 aa31.63■■■□□ 2.65
PMS1-220ENST00000618056 MPNDQ8N594 471 aa31.63■■■□□ 2.65
PMS1-220ENST00000618056 SEC31BQ9NQW1 1179 aa31.63■■■□□ 2.65
PMS1-220ENST00000618056 HNRNPUQ00839 825 aaKnown RBP eCLIP31.62■■■□□ 2.65
PMS1-220ENST00000618056 DPP8Q6V1X1 898 aaPredicted RBP31.62■■■□□ 2.65
PMS1-220ENST00000618056 SUPT20HQ8NEM7 779 aa31.62■■■□□ 2.65
PMS1-220ENST00000618056 TTLL11Q8NHH1 800 aa31.62■■■□□ 2.65
PMS1-220ENST00000618056 COL4A5P29400 1685 aa31.62■■■□□ 2.65
PMS1-220ENST00000618056 RTL9Q8NET4 1388 aa31.61■■■□□ 2.65
PMS1-220ENST00000618056 LTBP1Q14766 1721 aa31.61■■■□□ 2.65
PMS1-220ENST00000618056 RRAGCQ9HB90 399 aa31.6■■■□□ 2.65
PMS1-220ENST00000618056 DUOX1Q9NRD9 1551 aa31.6■■■□□ 2.65
PMS1-220ENST00000618056 FZD9O00144 591 aa31.59■■■□□ 2.65
PMS1-220ENST00000618056 ALDH1L1O75891 902 aa31.59■■■□□ 2.65
PMS1-220ENST00000618056 JDP2Q8WYK2 163 aa31.59■■■□□ 2.65
PMS1-220ENST00000618056 SPEF2Q9C093 1822 aa31.58■■■□□ 2.65
PMS1-220ENST00000618056 SLC4A10Q6U841 1118 aa31.58■■■□□ 2.65
PMS1-220ENST00000618056 LARGE2Q8N3Y3 721 aa31.58■■■□□ 2.65
PMS1-220ENST00000618056 CCDC85AQ96PX6 553 aaPredicted RBP31.58■■■□□ 2.65
PMS1-220ENST00000618056 BCL2L13Q9BXK5 485 aa31.58■■■□□ 2.65
PMS1-220ENST00000618056 SMC4Q9NTJ3 1288 aa31.58■■■□□ 2.65
PMS1-220ENST00000618056 TOMM70O94826 608 aa31.57■■■□□ 2.64
PMS1-220ENST00000618056 VEGFAP15692 232 aaPredicted RBP31.57■■■□□ 2.64
PMS1-220ENST00000618056 SRCIN1Q9C0H9 1055 aa31.57■■■□□ 2.64
PMS1-220ENST00000618056 SCN4AP35499 1836 aa31.57■■■□□ 2.64
PMS1-220ENST00000618056 PPIP5K2O43314 1243 aa31.56■■■□□ 2.64
PMS1-220ENST00000618056 CDC5LQ99459 802 aaKnown RBP31.56■■■□□ 2.64
PMS1-220ENST00000618056 DDNO94850 711 aaPredicted RBP31.55■■■□□ 2.64
PMS1-220ENST00000618056 BRPF1P55201 1214 aaPredicted RBP31.55■■■□□ 2.64
PMS1-220ENST00000618056 GREM2Q9H772 168 aa31.55■■■□□ 2.64
PMS1-220ENST00000618056 ZNF541Q9H0D2 1346 aa31.55■■■□□ 2.64
PMS1-220ENST00000618056 POTECB2RU33 542 aa31.54■■■□□ 2.64
PMS1-220ENST00000618056 GRM8O00222 908 aa31.54■■■□□ 2.64
PMS1-220ENST00000618056 CSF1RP07333 972 aa31.54■■■□□ 2.64
PMS1-220ENST00000618056 AOC3Q16853 763 aa31.54■■■□□ 2.64
PMS1-220ENST00000618056 ANKRD18AQ8IVF6 992 aa31.54■■■□□ 2.64
PMS1-220ENST00000618056 KIAA2012Q0VF49 1180 aa31.53■■■□□ 2.64
PMS1-220ENST00000618056 L3MBTL3Q96JM7 780 aaPredicted RBP31.53■■■□□ 2.64
PMS1-220ENST00000618056 NSFL1CQ9UNZ2 370 aaKnown RBP31.53■■■□□ 2.64
PMS1-220ENST00000618056 C16orf71Q8IYS4 520 aaPredicted RBP31.52■■■□□ 2.64
PMS1-220ENST00000618056 GPSM2P81274 684 aa31.52■■■□□ 2.64
PMS1-220ENST00000618056 NIM1KQ8IY84 436 aa31.52■■■□□ 2.64
PMS1-220ENST00000618056 PODXL2Q9NZ53 605 aa31.52■■■□□ 2.64
PMS1-220ENST00000618056 RBM46Q8TBY0 533 aaKnown RBP31.51■■■□□ 2.63
PMS1-220ENST00000618056 C9orf78Q9NZ63 289 aaPredicted RBP31.51■■■□□ 2.63
PMS1-220ENST00000618056 ZBED9Q6R2W3 1325 aa31.5■■■□□ 2.63
PMS1-220ENST00000618056 RARSP54136 660 aaKnown RBP31.5■■■□□ 2.63
PMS1-220ENST00000618056 EIF6P56537 245 aaKnown RBP31.5■■■□□ 2.63
PMS1-220ENST00000618056 FOXO4P98177 505 aa31.49■■■□□ 2.63
PMS1-220ENST00000618056 GPC2Q8N158 579 aa31.49■■■□□ 2.63
PMS1-220ENST00000618056 BSDC1Q9NW68 430 aaPredicted RBP31.49■■■□□ 2.63
PMS1-220ENST00000618056 POLLQ9UGP5 575 aa31.49■■■□□ 2.63
PMS1-220ENST00000618056 UTYO14607 1347 aa31.48■■■□□ 2.63
PMS1-220ENST00000618056 FAM161AQ3B820 660 aa31.48■■■□□ 2.63
PMS1-220ENST00000618056 ITGA6P23229 1130 aa31.47■■■□□ 2.63
PMS1-220ENST00000618056 TBC1D16Q8TBP0 767 aa31.47■■■□□ 2.63
PMS1-220ENST00000618056 ZNRF3Q9ULT6 936 aa31.47■■■□□ 2.63
PMS1-220ENST00000618056 IQCA1LA6NCM1 817 aa31.46■■■□□ 2.63
PMS1-220ENST00000618056 WASHC4Q2M389 1173 aa31.46■■■□□ 2.63
PMS1-220ENST00000618056 ANKIB1Q9P2G1 1089 aa31.46■■■□□ 2.63
PMS1-220ENST00000618056 C6orf229H3BNL8 230 aa31.45■■■□□ 2.62
PMS1-220ENST00000618056 EYA3Q99504 573 aa31.45■■■□□ 2.62
PMS1-220ENST00000618056 NOB1Q9ULX3 412 aaKnown RBP31.45■■■□□ 2.62
PMS1-220ENST00000618056 CEP350Q5VT06 3117 aa31.44■■■□□ 2.62
PMS1-220ENST00000618056 XDHP47989 1333 aa31.44■■■□□ 2.62
PMS1-220ENST00000618056 NBPF7P0C2Y1 421 aaPredicted RBP31.44■■■□□ 2.62
PMS1-220ENST00000618056 IGHMBP2P38935 993 aaKnown RBP31.44■■■□□ 2.62
PMS1-220ENST00000618056 EPHA10Q5JZY3 1008 aa31.43■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms