RNA–Protein interactions for RNA: ENST00000618001.4

TGIF1-223, Transcript of TGFB induced factor homeobox 1, human

TSL 2 BASIC

Gene TGIF1, Length 3,030 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TGIF1-223	ENST00000618001	CHPF2	Q9P2E5	772 aa		10.62	□□□□□ -0.71
TGIF1-223	ENST00000618001	DBF4	Q9UBU7	674 aa	Predicted RBP	10.62	□□□□□ -0.71
TGIF1-223	ENST00000618001	ZNF853	P0CG23	659 aa		10.62	□□□□□ -0.71
TGIF1-223	ENST00000618001	DDX10	Q13206	875 aa	Known RBP	10.62	□□□□□ -0.71
TGIF1-223	ENST00000618001	SLC51A	Q86UW1	340 aa		10.62	□□□□□ -0.71
TGIF1-223	ENST00000618001	CCDC146	Q8IYE0	955 aa		10.62	□□□□□ -0.71
TGIF1-223	ENST00000618001	MKRN1	Q9UHC7	482 aa	Known RBP	10.62	□□□□□ -0.71
TGIF1-223	ENST00000618001	ADAMTS8	Q9UP79	889 aa		10.62	□□□□□ -0.71
TGIF1-223	ENST00000618001	TRIM28	Q13263	835 aa	Known RBP	10.61	□□□□□ -0.71
TGIF1-223	ENST00000618001	ZNRF3	Q9ULT6	936 aa		10.61	□□□□□ -0.71
TGIF1-223	ENST00000618001	PPIP5K2	O43314	1243 aa		10.61	□□□□□ -0.71
TGIF1-223	ENST00000618001	KIAA2012	Q0VF49	1180 aa		10.61	□□□□□ -0.71
TGIF1-223	ENST00000618001	HDGFL1	Q5TGJ6	251 aa		10.61	□□□□□ -0.71
TGIF1-223	ENST00000618001	TNS4	Q8IZW8	715 aa		10.61	□□□□□ -0.71
TGIF1-223	ENST00000618001	HYPK	Q9NX55	129 aa		10.61	□□□□□ -0.71
TGIF1-223	ENST00000618001	TRMT112	Q9UI30	125 aa	Known RBP	10.61	□□□□□ -0.71
TGIF1-223	ENST00000618001	AOC3	Q16853	763 aa		10.6	□□□□□ -0.71
TGIF1-223	ENST00000618001	KRT24	Q2M2I5	525 aa		10.6	□□□□□ -0.71
TGIF1-223	ENST00000618001	PRKRIP1	Q9H875	184 aa	Predicted RBP	10.6	□□□□□ -0.71
TGIF1-223	ENST00000618001	PRDM10	Q9NQV6	1147 aa		10.6	□□□□□ -0.71
TGIF1-223	ENST00000618001	GJA3	Q9Y6H8	435 aa		10.6	□□□□□ -0.71
TGIF1-223	ENST00000618001	VEGFB	P49765	207 aa		10.6	□□□□□ -0.71
TGIF1-223	ENST00000618001	SF3B3	Q15393	1217 aa	Known RBP	10.6	□□□□□ -0.71
TGIF1-223	ENST00000618001	MAP1S	Q66K74	1059 aa	Predicted RBP	10.6	□□□□□ -0.71
TGIF1-223	ENST00000618001	DPP8	Q6V1X1	898 aa	Predicted RBP	10.6	□□□□□ -0.71
TGIF1-223	ENST00000618001	DDX46	Q7L014	1031 aa	Known RBP	10.6	□□□□□ -0.71
TGIF1-223	ENST00000618001	ADARB2	Q9NS39	739 aa	Known RBP	10.6	□□□□□ -0.71
TGIF1-223	ENST00000618001	IFT57	Q9NWB7	429 aa		10.6	□□□□□ -0.71
TGIF1-223	ENST00000618001	GPRC5D	Q9NZD1	345 aa		10.6	□□□□□ -0.71
TGIF1-223	ENST00000618001	PGAP2	Q9UHJ9	254 aa		10.6	□□□□□ -0.71
TGIF1-223	ENST00000618001	CLEC11A	Q9Y240	323 aa		10.6	□□□□□ -0.71
TGIF1-223	ENST00000618001	TRPM7	Q96QT4	1865 aa		10.6	□□□□□ -0.71
TGIF1-223	ENST00000618001	HCLS1	P14317	486 aa	Predicted RBP	10.6	□□□□□ -0.71
TGIF1-223	ENST00000618001	AIMP1	Q12904	312 aa	Known RBP	10.6	□□□□□ -0.71
TGIF1-223	ENST00000618001	ANKRD13D	Q6ZTN6	518 aa		10.6	□□□□□ -0.71
TGIF1-223	ENST00000618001	MPND	Q8N594	471 aa		10.6	□□□□□ -0.71
TGIF1-223	ENST00000618001	EPS15	P42566	896 aa		10.59	□□□□□ -0.71
TGIF1-223	ENST00000618001	CALD1	Q05682	793 aa	Known RBP	10.59	□□□□□ -0.71
TGIF1-223	ENST00000618001	NECTIN2	Q92692	538 aa		10.59	□□□□□ -0.71
TGIF1-223	ENST00000618001	MBIP	Q9NS73	344 aa		10.59	□□□□□ -0.71
TGIF1-223	ENST00000618001	WBP1L	Q9NX94	342 aa		10.59	□□□□□ -0.71
TGIF1-223	ENST00000618001	CXCL9	Q07325	125 aa		10.58	□□□□□ -0.72
TGIF1-223	ENST00000618001	NEUROD2	Q15784	382 aa		10.58	□□□□□ -0.72
TGIF1-223	ENST00000618001	NCBP3	Q53F19	620 aa	Known RBP	10.58	□□□□□ -0.72
TGIF1-223	ENST00000618001	YTHDC1	Q96MU7	727 aa	Known RBP	10.58	□□□□□ -0.72
TGIF1-223	ENST00000618001	ZNF609	O15014	1411 aa		10.58	□□□□□ -0.72
TGIF1-223	ENST00000618001	COL4A1	P02462	1669 aa		10.58	□□□□□ -0.72
TGIF1-223	ENST00000618001	FOXN1	O15353	648 aa		10.58	□□□□□ -0.72
TGIF1-223	ENST00000618001	DEFB115	Q30KQ5	88 aa		10.58	□□□□□ -0.72
TGIF1-223	ENST00000618001	DUSP27	Q5VZP5	1158 aa		10.58	□□□□□ -0.72
TGIF1-223	ENST00000618001	TNIP1	Q15025	636 aa		10.58	□□□□□ -0.72
TGIF1-223	ENST00000618001	ZC3H15	Q8WU90	426 aa	Known RBP	10.58	□□□□□ -0.72
TGIF1-223	ENST00000618001	TCERG1	O14776	1098 aa	Known RBP	10.57	□□□□□ -0.72
TGIF1-223	ENST00000618001	CTCF	P49711	727 aa	Predicted RBP	10.57	□□□□□ -0.72
TGIF1-223	ENST00000618001	CIAPIN1	Q6FI81	312 aa		10.57	□□□□□ -0.72
TGIF1-223	ENST00000618001	LAS1L	Q9Y4W2	734 aa	Known RBP	10.57	□□□□□ -0.72
TGIF1-223	ENST00000618001	GNAI1	P63096	354 aa		10.57	□□□□□ -0.72
TGIF1-223	ENST00000618001	AIDA	Q96BJ3	306 aa		10.57	□□□□□ -0.72
TGIF1-223	ENST00000618001	HHIPL1	Q96JK4	782 aa		10.57	□□□□□ -0.72
TGIF1-223	ENST00000618001	CHMP4A	Q9BY43	222 aa		10.57	□□□□□ -0.72
TGIF1-223	ENST00000618001	WDR33	Q9C0J8	1336 aa	Known RBP	10.57	□□□□□ -0.72
TGIF1-223	ENST00000618001	TAF1	P21675	1872 aa		10.56	□□□□□ -0.72
TGIF1-223	ENST00000618001	HSP90B1	P14625	803 aa	Known RBP	10.56	□□□□□ -0.72
TGIF1-223	ENST00000618001	GMPS	P49915	693 aa	Predicted RBP	10.56	□□□□□ -0.72
TGIF1-223	ENST00000618001	MAP2K1	Q02750	393 aa	Predicted RBP	10.56	□□□□□ -0.72
TGIF1-223	ENST00000618001	TLL2	Q9Y6L7	1015 aa		10.56	□□□□□ -0.72
TGIF1-223	ENST00000618001	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	10.56	□□□□□ -0.72
TGIF1-223	ENST00000618001	YDJC	A8MPS7	323 aa		10.55	□□□□□ -0.72
TGIF1-223	ENST00000618001	CST9	Q5W186	159 aa		10.55	□□□□□ -0.72
TGIF1-223	ENST00000618001	FAM89A	Q96GI7	184 aa		10.55	□□□□□ -0.72
TGIF1-223	ENST00000618001	GOLGA2	Q08379	1002 aa		10.55	□□□□□ -0.72
TGIF1-223	ENST00000618001	DPF2	Q92785	391 aa		10.55	□□□□□ -0.72
TGIF1-223	ENST00000618001	ECE1	P42892	770 aa		10.55	□□□□□ -0.72
TGIF1-223	ENST00000618001	CELF1	Q92879	486 aa	Known RBP	10.55	□□□□□ -0.72
TGIF1-223	ENST00000618001	ABT1	Q9ULW3	272 aa	Known RBP	10.55	□□□□□ -0.72
TGIF1-223	ENST00000618001	ATP5J2-PTCD1	G3V325	749 aa		10.54	□□□□□ -0.72
TGIF1-223	ENST00000618001	IRS4	O14654	1257 aa	Predicted RBP	10.54	□□□□□ -0.72
TGIF1-223	ENST00000618001	RPS12	P25398	132 aa	Known RBP	10.54	□□□□□ -0.72
TGIF1-223	ENST00000618001	CCDC191	Q8NCU4	936 aa		10.54	□□□□□ -0.72
TGIF1-223	ENST00000618001	PSME4	Q14997	1843 aa		10.54	□□□□□ -0.72
TGIF1-223	ENST00000618001	APAF1	O14727	1248 aa		10.54	□□□□□ -0.72
TGIF1-223	ENST00000618001	PCCA	P05165	728 aa	Predicted RBP	10.54	□□□□□ -0.72
TGIF1-223	ENST00000618001	CCDC27	Q2M243	656 aa		10.54	□□□□□ -0.72
TGIF1-223	ENST00000618001	WASHC4	Q2M389	1173 aa		10.54	□□□□□ -0.72
TGIF1-223	ENST00000618001	TRAF5	O00463	557 aa		10.53	□□□□□ -0.72
TGIF1-223	ENST00000618001	HSPA8	P11142	646 aa	Known RBP	10.53	□□□□□ -0.72
TGIF1-223	ENST00000618001	GPSM2	P81274	684 aa		10.53	□□□□□ -0.72
TGIF1-223	ENST00000618001	EYA3	Q99504	573 aa		10.53	□□□□□ -0.72
TGIF1-223	ENST00000618001	RAD17	O75943	681 aa		10.53	□□□□□ -0.72
TGIF1-223	ENST00000618001	HIRA	P54198	1017 aa	Predicted RBP	10.53	□□□□□ -0.72
TGIF1-223	ENST00000618001	RIC3	Q7Z5B4	369 aa		10.53	□□□□□ -0.72
TGIF1-223	ENST00000618001	CAPNS2	Q96L46	248 aa		10.53	□□□□□ -0.72
TGIF1-223	ENST00000618001	POLL	Q9UGP5	575 aa		10.53	□□□□□ -0.72
TGIF1-223	ENST00000618001	MAP2K2	P36507	400 aa		10.52	□□□□□ -0.72
TGIF1-223	ENST00000618001	RPS8	P62241	208 aa	Known RBP	10.52	□□□□□ -0.72
TGIF1-223	ENST00000618001	SAPCD2	Q86UD0	394 aa		10.52	□□□□□ -0.72
TGIF1-223	ENST00000618001	TBC1D16	Q8TBP0	767 aa		10.52	□□□□□ -0.72
TGIF1-223	ENST00000618001	BCL2L13	Q9BXK5	485 aa		10.52	□□□□□ -0.72
TGIF1-223	ENST00000618001	PHAX	Q9H814	394 aa	Known RBP	10.52	□□□□□ -0.72
TGIF1-223	ENST00000618001	CNOT7	Q9UIV1	285 aa	Known RBP	10.52	□□□□□ -0.72

Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms