RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 NOP56O00567 594 aaKnown RBP12.81□□□□□ -0.36
POLR2A-209ENST00000617998 MCM9Q9NXL9 1143 aa12.81□□□□□ -0.36
POLR2A-209ENST00000617998 SPATA31A3Q5VYP0 1347 aa12.8□□□□□ -0.36
POLR2A-209ENST00000617998 KIAA0825Q8IV33 1275 aa12.8□□□□□ -0.36
POLR2A-209ENST00000617998 TEKT1Q969V4 418 aa12.8□□□□□ -0.36
POLR2A-209ENST00000617998 MAGEB6P1A0A0J9YX57 407 aa12.8□□□□□ -0.36
POLR2A-209ENST00000617998 GOLIM4O00461 696 aa12.8□□□□□ -0.36
POLR2A-209ENST00000617998 RDXP35241 583 aaKnown RBP12.8□□□□□ -0.36
POLR2A-209ENST00000617998 HOMER1Q86YM7 354 aa12.8□□□□□ -0.36
POLR2A-209ENST00000617998 CFAP43Q8NDM7 1665 aa12.8□□□□□ -0.36
POLR2A-209ENST00000617998 KDM5DQ9BY66 1539 aa12.8□□□□□ -0.36
POLR2A-209ENST00000617998 RPS8P62241 208 aaKnown RBP12.8□□□□□ -0.36
POLR2A-209ENST00000617998 TTF2Q9UNY4 1162 aaKnown RBP12.8□□□□□ -0.36
POLR2A-209ENST00000617998 MAGI3Q5TCQ9 1506 aa12.8□□□□□ -0.36
POLR2A-209ENST00000617998 A2ML1A8K2U0 1454 aa12.8□□□□□ -0.36
POLR2A-209ENST00000617998 NPR1P16066 1061 aa12.8□□□□□ -0.36
POLR2A-209ENST00000617998 PTMSP20962 102 aa12.8□□□□□ -0.36
POLR2A-209ENST00000617998 KSR2Q6VAB6 950 aa12.8□□□□□ -0.36
POLR2A-209ENST00000617998 MASTLQ96GX5 879 aa12.8□□□□□ -0.36
POLR2A-209ENST00000617998 ADGRL3Q9HAR2 1447 aa12.79□□□□□ -0.36
POLR2A-209ENST00000617998 NLRP5P59047 1200 aa12.79□□□□□ -0.36
POLR2A-209ENST00000617998 TMC4Q7Z404 712 aa12.79□□□□□ -0.36
POLR2A-209ENST00000617998 RAB34Q9BZG1 259 aa12.79□□□□□ -0.36
POLR2A-209ENST00000617998 KCNA4P22459 653 aa12.79□□□□□ -0.36
POLR2A-209ENST00000617998 SP4Q02446 784 aa12.79□□□□□ -0.36
POLR2A-209ENST00000617998 SLC4A4Q9Y6R1 1079 aa12.79□□□□□ -0.36
POLR2A-209ENST00000617998 SBNO1A3KN83 1393 aa12.79□□□□□ -0.36
POLR2A-209ENST00000617998 GOLGA6L19H0YKK7 550 aa12.79□□□□□ -0.36
POLR2A-209ENST00000617998 IFIT3O14879 490 aaKnown RBP12.79□□□□□ -0.36
POLR2A-209ENST00000617998 KCNQ2O43526 872 aa12.79□□□□□ -0.36
POLR2A-209ENST00000617998 CCDC73Q6ZRK6 1079 aa12.79□□□□□ -0.36
POLR2A-209ENST00000617998 ZEB2O60315 1214 aa12.79□□□□□ -0.36
POLR2A-209ENST00000617998 TMEM266Q2M3C6 531 aa12.79□□□□□ -0.36
POLR2A-209ENST00000617998 TTLL5Q6EMB2 1281 aa12.79□□□□□ -0.36
POLR2A-209ENST00000617998 NAP1L1P55209 391 aaKnown RBP12.78□□□□□ -0.36
POLR2A-209ENST00000617998 SLC16A10Q8TF71 515 aa12.78□□□□□ -0.36
POLR2A-209ENST00000617998 ZBED2Q9BTP6 218 aa12.78□□□□□ -0.36
POLR2A-209ENST00000617998 HACL1Q9UJ83 578 aa12.78□□□□□ -0.36
POLR2A-209ENST00000617998 MFSD6Q6ZSS7 791 aa12.78□□□□□ -0.36
POLR2A-209ENST00000617998 FERMT2Q96AC1 680 aa12.78□□□□□ -0.36
POLR2A-209ENST00000617998 KDM5CP41229 1560 aa12.78□□□□□ -0.36
POLR2A-209ENST00000617998 BACH1O14867 736 aa12.78□□□□□ -0.36
POLR2A-209ENST00000617998 IL15P40933 162 aaPredicted RBP12.78□□□□□ -0.36
POLR2A-209ENST00000617998 CDC45O75419 566 aa12.78□□□□□ -0.36
POLR2A-209ENST00000617998 APBB1IPQ7Z5R6 666 aaPredicted RBP12.78□□□□□ -0.36
POLR2A-209ENST00000617998 CENPQQ7L2Z9 268 aaPredicted RBP12.77□□□□□ -0.36
POLR2A-209ENST00000617998 MAGEC2Q9UBF1 373 aaPredicted RBP12.77□□□□□ -0.36
POLR2A-209ENST00000617998 SAP30BPQ9UHR5 308 aaKnown RBP12.77□□□□□ -0.36
POLR2A-209ENST00000617998 CWC27Q6UX04 472 aaKnown RBP12.77□□□□□ -0.36
POLR2A-209ENST00000617998 BICD1Q96G01 975 aa12.77□□□□□ -0.36
POLR2A-209ENST00000617998 EXOC6BQ9Y2D4 811 aa12.77□□□□□ -0.36
POLR2A-209ENST00000617998 CCDC117Q8IWD4 279 aaPredicted RBP12.77□□□□□ -0.37
POLR2A-209ENST00000617998 RAET1EQ8TD07 263 aa12.77□□□□□ -0.37
POLR2A-209ENST00000617998 SLC12A7Q9Y666 1083 aa12.77□□□□□ -0.37
POLR2A-209ENST00000617998 POLR3AO14802 1390 aaPredicted RBP12.77□□□□□ -0.37
POLR2A-209ENST00000617998 ABCC11Q96J66 1382 aa12.77□□□□□ -0.37
POLR2A-209ENST00000617998 GCC1Q96CN9 775 aa12.77□□□□□ -0.37
POLR2A-209ENST00000617998 ZMYND15Q9H091 742 aa12.77□□□□□ -0.37
POLR2A-209ENST00000617998 CCDC85CA6NKD9 419 aa12.77□□□□□ -0.37
POLR2A-209ENST00000617998 COL17A1Q9UMD9 1497 aaPredicted RBP12.77□□□□□ -0.37
POLR2A-209ENST00000617998 STK3Q13188 491 aa12.77□□□□□ -0.37
POLR2A-209ENST00000617998 COA7Q96BR5 231 aa12.77□□□□□ -0.37
POLR2A-209ENST00000617998 ITGA6P23229 1130 aa12.76□□□□□ -0.37
POLR2A-209ENST00000617998 ZNF157P51786 506 aaPredicted RBP12.76□□□□□ -0.37
POLR2A-209ENST00000617998 GINS2Q9Y248 185 aa12.76□□□□□ -0.37
POLR2A-209ENST00000617998 CCDC194A0A1B0GVG4 234 aa12.76□□□□□ -0.37
POLR2A-209ENST00000617998 GRM8O00222 908 aa12.76□□□□□ -0.37
POLR2A-209ENST00000617998 AAMPQ13685 434 aa12.76□□□□□ -0.37
POLR2A-209ENST00000617998 RPAP2Q8IXW5 612 aaPredicted RBP12.76□□□□□ -0.37
POLR2A-209ENST00000617998 PLBD2Q8NHP8 589 aa12.76□□□□□ -0.37
POLR2A-209ENST00000617998 PLEKHG3A1L390 1219 aa12.76□□□□□ -0.37
POLR2A-209ENST00000617998 KRT32Q14532 448 aa12.76□□□□□ -0.37
POLR2A-209ENST00000617998 ANGEL1Q9UNK9 670 aaKnown RBP12.76□□□□□ -0.37
POLR2A-209ENST00000617998 CYP46A1Q9Y6A2 500 aa12.76□□□□□ -0.37
POLR2A-209ENST00000617998 CCDC82Q8N4S0 544 aa12.76□□□□□ -0.37
POLR2A-209ENST00000617998 GOPCQ9HD26 462 aa12.76□□□□□ -0.37
POLR2A-209ENST00000617998 CIZ1Q9ULV3 898 aaPredicted RBP12.76□□□□□ -0.37
POLR2A-209ENST00000617998 UBA5Q9GZZ9 404 aa12.76□□□□□ -0.37
POLR2A-209ENST00000617998 PALLDQ8WX93 1383 aa12.75□□□□□ -0.37
POLR2A-209ENST00000617998 POTEJP0CG39 1038 aa12.75□□□□□ -0.37
POLR2A-209ENST00000617998 UBXN2AP68543 259 aa12.75□□□□□ -0.37
POLR2A-209ENST00000617998 ANKRD1Q15327 319 aa12.75□□□□□ -0.37
POLR2A-209ENST00000617998 GRIPAP1Q4V328 841 aa12.75□□□□□ -0.37
POLR2A-209ENST00000617998 NBPF11Q86T75 865 aa12.75□□□□□ -0.37
POLR2A-209ENST00000617998 NCAPG2Q86XI2 1143 aa12.75□□□□□ -0.37
POLR2A-209ENST00000617998 MTFR1LQ9H019 292 aa12.75□□□□□ -0.37
POLR2A-209ENST00000617998 KRT26Q7Z3Y9 468 aa12.75□□□□□ -0.37
POLR2A-209ENST00000617998 CPXCR1Q8N123 301 aa12.75□□□□□ -0.37
POLR2A-209ENST00000617998 FAM200AQ8TCP9 573 aa12.75□□□□□ -0.37
POLR2A-209ENST00000617998 AP5M1Q9H0R1 490 aa12.75□□□□□ -0.37
POLR2A-209ENST00000617998 PTPDC1A2A3K4 754 aa12.75□□□□□ -0.37
POLR2A-209ENST00000617998 STIM1Q13586 685 aa12.75□□□□□ -0.37
POLR2A-209ENST00000617998 MFSD14BQ5SR56 506 aa12.75□□□□□ -0.37
POLR2A-209ENST00000617998 CCDC174Q6PII3 467 aa12.75□□□□□ -0.37
POLR2A-209ENST00000617998 USP40Q9NVE5 1235 aa12.75□□□□□ -0.37
POLR2A-209ENST00000617998 JMYQ8N9B5 988 aa12.74□□□□□ -0.37
POLR2A-209ENST00000617998 DBNDD1Q9H9R9 158 aa12.74□□□□□ -0.37
POLR2A-209ENST00000617998 POLKQ9UBT6 870 aa12.74□□□□□ -0.37
POLR2A-209ENST00000617998 SPDYE3A6NKU9 549 aa12.74□□□□□ -0.37
POLR2A-209ENST00000617998 BBOX1O75936 387 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms