RNA–Protein interactions for RNA: ENST00000616868.1

SULF1-223, Transcript of sulfatase 1, human

TSL 5 BASIC

Gene SULF1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SULF1-223	ENST00000616868	WDR33	Q9C0J8	1336 aa	Known RBP	13.56	□□□□□ -0.24
SULF1-223	ENST00000616868		A0A0G2JS52	829 aa		13.56	□□□□□ -0.24
SULF1-223	ENST00000616868	CUL4A	Q13619	759 aa		13.56	□□□□□ -0.24
SULF1-223	ENST00000616868	DNAJC2	Q99543	621 aa	Known RBP	13.56	□□□□□ -0.24
SULF1-223	ENST00000616868	TMX1	Q9H3N1	280 aa		13.56	□□□□□ -0.24
SULF1-223	ENST00000616868	ELF2	Q15723	593 aa		13.55	□□□□□ -0.24
SULF1-223	ENST00000616868	SYTL4	Q96C24	671 aa	Predicted RBP	13.55	□□□□□ -0.24
SULF1-223	ENST00000616868	DNM1	Q05193	864 aa	Known RBP	13.55	□□□□□ -0.24
SULF1-223	ENST00000616868	ARID5B	Q14865	1188 aa		13.55	□□□□□ -0.24
SULF1-223	ENST00000616868	FBXO38	Q6PIJ6	1188 aa		13.55	□□□□□ -0.24
SULF1-223	ENST00000616868	DNAAF4	Q8WXU2	420 aa		13.55	□□□□□ -0.24
SULF1-223	ENST00000616868	FMNL2	Q96PY5	1086 aa		13.55	□□□□□ -0.24
SULF1-223	ENST00000616868	TRMT1	Q9NXH9	659 aa	Known RBP	13.55	□□□□□ -0.24
SULF1-223	ENST00000616868	MAP3K2	Q9Y2U5	619 aa		13.55	□□□□□ -0.24
SULF1-223	ENST00000616868	COL14A1	Q05707	1796 aa	Known RBP	13.54	□□□□□ -0.24
SULF1-223	ENST00000616868	USP27X	A6NNY8	438 aa		13.54	□□□□□ -0.24
SULF1-223	ENST00000616868	ANKRD44	Q8N8A2	993 aa		13.54	□□□□□ -0.24
SULF1-223	ENST00000616868	TRIM5	Q9C035	493 aa		13.54	□□□□□ -0.24
SULF1-223	ENST00000616868	C5	P01031	1676 aa		13.54	□□□□□ -0.24
SULF1-223	ENST00000616868	ATP10D	Q9P241	1426 aa		13.54	□□□□□ -0.24
SULF1-223	ENST00000616868	HNRNPH2	P55795	449 aa	Known RBP	13.54	□□□□□ -0.24
SULF1-223	ENST00000616868	PDIA6	Q15084	440 aa		13.54	□□□□□ -0.24
SULF1-223	ENST00000616868	LRRFIP2	Q9Y608	721 aa	Known RBP	13.54	□□□□□ -0.24
SULF1-223	ENST00000616868	SNRPA1	P09661	255 aa	Known RBP	13.54	□□□□□ -0.24
SULF1-223	ENST00000616868	CPA1	P15085	419 aa		13.54	□□□□□ -0.24
SULF1-223	ENST00000616868	UBE2H	P62256	183 aa		13.54	□□□□□ -0.24
SULF1-223	ENST00000616868	USP44	Q9H0E7	712 aa		13.54	□□□□□ -0.24
SULF1-223	ENST00000616868	ADCY9	O60503	1353 aa		13.54	□□□□□ -0.24
SULF1-223	ENST00000616868	GNAI2	P04899	355 aa		13.53	□□□□□ -0.24
SULF1-223	ENST00000616868	FUCA2	Q9BTY2	467 aa		13.53	□□□□□ -0.24
SULF1-223	ENST00000616868	MAP4K4	O95819	1239 aa	Predicted RBP	13.53	□□□□□ -0.24
SULF1-223	ENST00000616868	RBM6	P78332	1123 aa	Known RBP	13.53	□□□□□ -0.24
SULF1-223	ENST00000616868	CEP135	Q66GS9	1140 aa		13.53	□□□□□ -0.24
SULF1-223	ENST00000616868	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
SULF1-223	ENST00000616868	EXOC6B	Q9Y2D4	811 aa		13.53	□□□□□ -0.24
SULF1-223	ENST00000616868	COL22A1	Q8NFW1	1626 aa	Predicted RBP	13.53	□□□□□ -0.24
SULF1-223	ENST00000616868	SHANK3	Q9BYB0	1731 aa		13.53	□□□□□ -0.24
SULF1-223	ENST00000616868	CWF19L2	Q2TBE0	894 aa	Known RBP	13.52	□□□□□ -0.24
SULF1-223	ENST00000616868	FAM173B	Q6P4H8	233 aa		13.52	□□□□□ -0.24
SULF1-223	ENST00000616868	CALCOCO1	Q9P1Z2	691 aa		13.52	□□□□□ -0.24
SULF1-223	ENST00000616868	ERVV-2	B6SEH9	535 aa		13.52	□□□□□ -0.25
SULF1-223	ENST00000616868	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.52	□□□□□ -0.25
SULF1-223	ENST00000616868	UBTFL1	P0CB47	393 aa	Predicted RBP	13.52	□□□□□ -0.25
SULF1-223	ENST00000616868	XAGE3	Q8WTP9	111 aa		13.52	□□□□□ -0.25
SULF1-223	ENST00000616868	C8orf37	Q96NL8	207 aa		13.52	□□□□□ -0.25
SULF1-223	ENST00000616868	ESYT1	Q9BSJ8	1104 aa		13.52	□□□□□ -0.25
SULF1-223	ENST00000616868	HYPK	Q9NX55	129 aa		13.52	□□□□□ -0.25
SULF1-223	ENST00000616868	EXOC5	O00471	708 aa		13.52	□□□□□ -0.25
SULF1-223	ENST00000616868	POLR3G	O15318	223 aa	Predicted RBP	13.52	□□□□□ -0.25
SULF1-223	ENST00000616868	ZSCAN22	P10073	491 aa	Predicted RBP	13.52	□□□□□ -0.25
SULF1-223	ENST00000616868	SYT1	P21579	422 aa		13.52	□□□□□ -0.25
SULF1-223	ENST00000616868	MCC	P23508	829 aa		13.52	□□□□□ -0.25
SULF1-223	ENST00000616868	BEND3	Q5T5X7	828 aa		13.52	□□□□□ -0.25
SULF1-223	ENST00000616868	ZSCAN25	Q6NSZ9	544 aa		13.52	□□□□□ -0.25
SULF1-223	ENST00000616868	COPS6	Q7L5N1	327 aa		13.52	□□□□□ -0.25
SULF1-223	ENST00000616868	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.52	□□□□□ -0.25
SULF1-223	ENST00000616868	CACTIN	Q8WUQ7	758 aa	Known RBP	13.52	□□□□□ -0.25
SULF1-223	ENST00000616868	TMOD3	Q9NYL9	352 aa		13.52	□□□□□ -0.25
SULF1-223	ENST00000616868	PNMA6E	A0A0J9YXQ4	647 aa		13.51	□□□□□ -0.25
SULF1-223	ENST00000616868	NKX1-1	Q15270	411 aa	Predicted RBP	13.51	□□□□□ -0.25
SULF1-223	ENST00000616868	IL25	Q9H293	177 aa		13.51	□□□□□ -0.25
SULF1-223	ENST00000616868	MRC1	P22897	1456 aa		13.51	□□□□□ -0.25
SULF1-223	ENST00000616868	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.51	□□□□□ -0.25
SULF1-223	ENST00000616868	GNAI3	P08754	354 aa		13.51	□□□□□ -0.25
SULF1-223	ENST00000616868	PDE1A	P54750	535 aa		13.51	□□□□□ -0.25
SULF1-223	ENST00000616868	IRX3	P78415	501 aa	Predicted RBP	13.51	□□□□□ -0.25
SULF1-223	ENST00000616868	RIC3	Q7Z5B4	369 aa		13.51	□□□□□ -0.25
SULF1-223	ENST00000616868	ZNF397	Q8NF99	534 aa	Predicted RBP	13.51	□□□□□ -0.25
SULF1-223	ENST00000616868	NEK11	Q8NG66	645 aa		13.51	□□□□□ -0.25
SULF1-223	ENST00000616868	ASAP1	Q9ULH1	1129 aa		13.51	□□□□□ -0.25
SULF1-223	ENST00000616868	VPS37C	A5D8V6	355 aa	Predicted RBP	13.51	□□□□□ -0.25
SULF1-223	ENST00000616868	TPM3	P06753	285 aa		13.51	□□□□□ -0.25
SULF1-223	ENST00000616868	CCDC192	P0DO97	292 aa		13.51	□□□□□ -0.25
SULF1-223	ENST00000616868	TNNT3	P45378	269 aa	Predicted RBP	13.51	□□□□□ -0.25
SULF1-223	ENST00000616868	MCM2	P49736	904 aa		13.51	□□□□□ -0.25
SULF1-223	ENST00000616868	CCDC144B	Q3MJ40	725 aa		13.51	□□□□□ -0.25
SULF1-223	ENST00000616868	KSR2	Q6VAB6	950 aa		13.51	□□□□□ -0.25
SULF1-223	ENST00000616868	CCDC144CP	Q8IYA2	1237 aa		13.51	□□□□□ -0.25
SULF1-223	ENST00000616868	NOL10	Q9BSC4	688 aa	Known RBP	13.51	□□□□□ -0.25
SULF1-223	ENST00000616868	STX6	O43752	255 aa		13.5	□□□□□ -0.25
SULF1-223	ENST00000616868	FERMT3	Q86UX7	667 aa		13.5	□□□□□ -0.25
SULF1-223	ENST00000616868	PIGB	Q92521	554 aa		13.5	□□□□□ -0.25
SULF1-223	ENST00000616868	INTS4	Q96HW7	963 aa	Known RBP	13.5	□□□□□ -0.25
SULF1-223	ENST00000616868	PLCH1	Q4KWH8	1693 aa		13.5	□□□□□ -0.25
SULF1-223	ENST00000616868	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.5	□□□□□ -0.25
SULF1-223	ENST00000616868	A1BG	P04217	495 aa		13.49	□□□□□ -0.25
SULF1-223	ENST00000616868	ANO6	Q4KMQ2	910 aa		13.49	□□□□□ -0.25
SULF1-223	ENST00000616868	UNC5CL	Q8IV45	518 aa		13.49	□□□□□ -0.25
SULF1-223	ENST00000616868	NGLY1	Q96IV0	654 aa		13.49	□□□□□ -0.25
SULF1-223	ENST00000616868	ZNF446	Q9NWS9	450 aa		13.49	□□□□□ -0.25
SULF1-223	ENST00000616868	FEZ2	Q9UHY8	353 aa	Predicted RBP	13.49	□□□□□ -0.25
SULF1-223	ENST00000616868	PLEKHG2	Q9H7P9	1386 aa		13.49	□□□□□ -0.25
SULF1-223	ENST00000616868	MRVI1	Q9Y6F6	885 aa		13.49	□□□□□ -0.25
SULF1-223	ENST00000616868	SPATA31A1	Q5TZJ5	1347 aa		13.48	□□□□□ -0.25
SULF1-223	ENST00000616868	TULP2	O00295	520 aa		13.48	□□□□□ -0.25
SULF1-223	ENST00000616868	F13A1	P00488	732 aa		13.48	□□□□□ -0.25
SULF1-223	ENST00000616868	LIG1	P18858	919 aa		13.48	□□□□□ -0.25
SULF1-223	ENST00000616868	TYRO3	Q06418	890 aa		13.48	□□□□□ -0.25
SULF1-223	ENST00000616868	LRRN4CL	Q8ND94	238 aa		13.48	□□□□□ -0.25
SULF1-223	ENST00000616868	CBX8	Q9HC52	389 aa		13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 46 ms