RNA–Protein interactions for RNA: ENST00000616278.4

DDB2-211, Transcript of damage specific DNA binding protein 2, humanhuman

TSL 2

Gene DDB2, Length 960 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB2-211ENST00000616278 LRRC37AA6NMS7 1700 aa14.36□□□□□ -0.11
DDB2-211ENST00000616278 C21orf2O43822 256 aa14.36□□□□□ -0.11
DDB2-211ENST00000616278 GRAPQ13588 217 aa14.36□□□□□ -0.11
DDB2-211ENST00000616278 CCDC93Q567U6 631 aa14.36□□□□□ -0.11
DDB2-211ENST00000616278 RTKN2Q8IZC4 609 aa14.36□□□□□ -0.11
DDB2-211ENST00000616278 GRAPLQ8TC17 118 aaPredicted RBP14.36□□□□□ -0.11
DDB2-211ENST00000616278 C7orf43Q8WVR3 580 aa14.36□□□□□ -0.11
DDB2-211ENST00000616278 HDAC5Q9UQL6 1122 aa14.36□□□□□ -0.11
DDB2-211ENST00000616278 LTBP3Q9NS15 1303 aa14.36□□□□□ -0.11
DDB2-211ENST00000616278 RTL9Q8NET4 1388 aa14.35□□□□□ -0.11
DDB2-211ENST00000616278 PPEF1O14829 653 aaPredicted RBP14.35□□□□□ -0.11
DDB2-211ENST00000616278 CASP7P55210 303 aa14.35□□□□□ -0.11
DDB2-211ENST00000616278 CTSWP56202 376 aa14.35□□□□□ -0.11
DDB2-211ENST00000616278 C3orf67Q6ZVT6 689 aa14.35□□□□□ -0.11
DDB2-211ENST00000616278 UTYO14607 1347 aa14.35□□□□□ -0.11
DDB2-211ENST00000616278 ABCC4O15439 1325 aa14.35□□□□□ -0.11
DDB2-211ENST00000616278 ZKSCAN2Q63HK3 967 aa14.34□□□□□ -0.11
DDB2-211ENST00000616278 ATF7IPQ6VMQ6 1270 aa14.34□□□□□ -0.11
DDB2-211ENST00000616278 SP8Q8IXZ3 490 aa14.34□□□□□ -0.11
DDB2-211ENST00000616278 UTRNP46939 3433 aa14.33□□□□□ -0.12
DDB2-211ENST00000616278 BCAR3O75815 825 aa14.33□□□□□ -0.12
DDB2-211ENST00000616278 INTS3Q68E01 1043 aaKnown RBP14.33□□□□□ -0.12
DDB2-211ENST00000616278 TTLL11Q8NHH1 800 aa14.33□□□□□ -0.12
DDB2-211ENST00000616278 FRAT1Q92837 279 aaPredicted RBP14.33□□□□□ -0.12
DDB2-211ENST00000616278 CDC5LQ99459 802 aaKnown RBP14.33□□□□□ -0.12
DDB2-211ENST00000616278 ATP6V0A2Q9Y487 856 aa14.33□□□□□ -0.12
DDB2-211ENST00000616278 SPEF2Q9C093 1822 aa14.33□□□□□ -0.12
DDB2-211ENST00000616278 ZC3H4Q9UPT8 1303 aaKnown RBP14.33□□□□□ -0.12
DDB2-211ENST00000616278 CSF1RP07333 972 aa14.32□□□□□ -0.12
DDB2-211ENST00000616278 MS4A1P11836 297 aa14.32□□□□□ -0.12
DDB2-211ENST00000616278 LMNB1P20700 586 aa14.32□□□□□ -0.12
DDB2-211ENST00000616278 YY1P25490 414 aa14.32□□□□□ -0.12
DDB2-211ENST00000616278 RPS8P62241 208 aaKnown RBP14.32□□□□□ -0.12
DDB2-211ENST00000616278 PSMD1Q99460 953 aa14.32□□□□□ -0.12
DDB2-211ENST00000616278 VPS33BQ9H267 617 aa14.32□□□□□ -0.12
DDB2-211ENST00000616278 TAOK3Q9H2K8 898 aa14.32□□□□□ -0.12
DDB2-211ENST00000616278 TIAM2Q8IVF5 1701 aa14.32□□□□□ -0.12
DDB2-211ENST00000616278 TRIM27P14373 513 aa14.31□□□□□ -0.12
DDB2-211ENST00000616278 FKBP4Q02790 459 aaKnown RBP eCLIP14.31□□□□□ -0.12
DDB2-211ENST00000616278 JARID2Q92833 1246 aaPredicted RBP14.31□□□□□ -0.12
DDB2-211ENST00000616278 NFKBIEO00221 500 aa14.3□□□□□ -0.12
DDB2-211ENST00000616278 ANKRD18AQ8IVF6 992 aa14.3□□□□□ -0.12
DDB2-211ENST00000616278 SUPT20HQ8NEM7 779 aa14.3□□□□□ -0.12
DDB2-211ENST00000616278 USP44Q9H0E7 712 aa14.3□□□□□ -0.12
DDB2-211ENST00000616278 ZNF219Q9P2Y4 722 aaPredicted RBP14.3□□□□□ -0.12
DDB2-211ENST00000616278 RCAN3Q9UKA8 241 aa14.3□□□□□ -0.12
DDB2-211ENST00000616278 SNED1Q8TER0 1413 aa14.3□□□□□ -0.12
DDB2-211ENST00000616278 NBPF7P0C2Y1 421 aaPredicted RBP14.29□□□□□ -0.12
DDB2-211ENST00000616278 FOXO4P98177 505 aa14.29□□□□□ -0.12
DDB2-211ENST00000616278 CELF1Q92879 486 aaKnown RBP14.29□□□□□ -0.12
DDB2-211ENST00000616278 ANKRD18BA2A2Z9 1011 aa14.28□□□□□ -0.12
DDB2-211ENST00000616278 GNAI3P08754 354 aa14.28□□□□□ -0.12
DDB2-211ENST00000616278 ITGA6P23229 1130 aa14.28□□□□□ -0.12
DDB2-211ENST00000616278 IGHMBP2P38935 993 aaKnown RBP14.28□□□□□ -0.12
DDB2-211ENST00000616278 IFIT5Q13325 482 aaKnown RBP14.28□□□□□ -0.12
DDB2-211ENST00000616278 LTBP1Q14766 1721 aa14.28□□□□□ -0.12
DDB2-211ENST00000616278 C9orf131Q5VYM1 1079 aa14.28□□□□□ -0.12
DDB2-211ENST00000616278 FTSJ3Q8IY81 847 aaKnown RBP14.28□□□□□ -0.12
DDB2-211ENST00000616278 DZIP1LQ8IYY4 767 aaKnown RBP14.28□□□□□ -0.12
DDB2-211ENST00000616278 MPNDQ8N594 471 aa14.28□□□□□ -0.12
DDB2-211ENST00000616278 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.28□□□□□ -0.12
DDB2-211ENST00000616278 YTHDC1Q96MU7 727 aaKnown RBP14.28□□□□□ -0.12
DDB2-211ENST00000616278 RTFDC1Q9BY42 306 aaPredicted RBP14.28□□□□□ -0.12
DDB2-211ENST00000616278 GREM2Q9H772 168 aa14.28□□□□□ -0.12
DDB2-211ENST00000616278 SEC31BQ9NQW1 1179 aa14.28□□□□□ -0.12
DDB2-211ENST00000616278 BSDC1Q9NW68 430 aaPredicted RBP14.28□□□□□ -0.12
DDB2-211ENST00000616278 RNF181Q9P0P0 153 aa14.28□□□□□ -0.12
DDB2-211ENST00000616278 UBTFL1P0CB47 393 aaPredicted RBP14.27□□□□□ -0.13
DDB2-211ENST00000616278 RASSF7Q02833 373 aa14.27□□□□□ -0.13
DDB2-211ENST00000616278 CCDC57Q2TAC2 916 aa14.27□□□□□ -0.13
DDB2-211ENST00000616278 RABL6Q3YEC7 729 aaPredicted RBP14.27□□□□□ -0.13
DDB2-211ENST00000616278 LMBR1LQ6UX01 489 aa14.27□□□□□ -0.13
DDB2-211ENST00000616278 DPP8Q6V1X1 898 aaPredicted RBP14.27□□□□□ -0.13
DDB2-211ENST00000616278 SUCLG2Q96I99 432 aa14.27□□□□□ -0.13
DDB2-211ENST00000616278 CCDC85AQ96PX6 553 aaPredicted RBP14.26□□□□□ -0.13
DDB2-211ENST00000616278 MPHOSPH8Q99549 860 aa14.26□□□□□ -0.13
DDB2-211ENST00000616278 PODXL2Q9NZ53 605 aa14.26□□□□□ -0.13
DDB2-211ENST00000616278 A0A1B0GUL6 1792 aa14.26□□□□□ -0.13
DDB2-211ENST00000616278 IARSP41252 1262 aaKnown RBP14.25□□□□□ -0.13
DDB2-211ENST00000616278 FAM161AQ3B820 660 aa14.25□□□□□ -0.13
DDB2-211ENST00000616278 OLFM4Q6UX06 510 aa14.25□□□□□ -0.13
DDB2-211ENST00000616278 CLUAP1Q96AJ1 413 aa14.25□□□□□ -0.13
DDB2-211ENST00000616278 NSFL1CQ9UNZ2 370 aaKnown RBP14.25□□□□□ -0.13
DDB2-211ENST00000616278 CHMP3Q9Y3E7 222 aa14.25□□□□□ -0.13
DDB2-211ENST00000616278 COL4A1P02462 1669 aa14.25□□□□□ -0.13
DDB2-211ENST00000616278 XDHP47989 1333 aa14.24□□□□□ -0.13
DDB2-211ENST00000616278 EPHA10Q5JZY3 1008 aa14.24□□□□□ -0.13
DDB2-211ENST00000616278 DPY19L2Q6NUT2 758 aa14.24□□□□□ -0.13
DDB2-211ENST00000616278 JDP2Q8WYK2 163 aa14.24□□□□□ -0.13
DDB2-211ENST00000616278 KAZALD1Q96I82 304 aa14.24□□□□□ -0.13
DDB2-211ENST00000616278 EYA3Q99504 573 aa14.24□□□□□ -0.13
DDB2-211ENST00000616278 ANKRD2Q9GZV1 360 aa14.24□□□□□ -0.13
DDB2-211ENST00000616278 CHMP4BQ9H444 224 aaKnown RBP14.24□□□□□ -0.13
DDB2-211ENST00000616278 BICC1Q9H694 974 aaKnown RBP14.24□□□□□ -0.13
DDB2-211ENST00000616278 ANKIB1Q9P2G1 1089 aa14.24□□□□□ -0.13
DDB2-211ENST00000616278 DUOX1Q9NRD9 1551 aa14.23□□□□□ -0.13
DDB2-211ENST00000616278 TAF7LQ5H9L4 462 aa14.23□□□□□ -0.13
DDB2-211ENST00000616278 TMEM57Q8N5G2 664 aa14.23□□□□□ -0.13
DDB2-211ENST00000616278 KDM2BQ8NHM5 1336 aa14.22□□□□□ -0.13
DDB2-211ENST00000616278 ATP2B4P23634 1241 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms