RNA–Protein interactions for RNA: ENST00000616002.1

RABGAP1-213, Transcript of RAB GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene RABGAP1, Length 1,595 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGAP1-213ENST00000616002 SRGNP10124 158 aa13.66□□□□□ -0.22
RABGAP1-213ENST00000616002 TRIM27P14373 513 aa13.66□□□□□ -0.22
RABGAP1-213ENST00000616002 BMP2KLQ5H9B9 411 aa13.66□□□□□ -0.22
RABGAP1-213ENST00000616002 DZIP3Q86Y13 1208 aaKnown RBP13.66□□□□□ -0.22
RABGAP1-213ENST00000616002 ARHGAP45Q92619 1136 aa13.66□□□□□ -0.22
RABGAP1-213ENST00000616002 MASTLQ96GX5 879 aa13.66□□□□□ -0.22
RABGAP1-213ENST00000616002 GBP4Q96PP9 640 aa13.66□□□□□ -0.22
RABGAP1-213ENST00000616002 MKRN1Q9UHC7 482 aaKnown RBP13.66□□□□□ -0.22
RABGAP1-213ENST00000616002 IBTKQ9P2D0 1353 aaPredicted RBP13.65□□□□□ -0.22
RABGAP1-213ENST00000616002 SLX4Q8IY92 1834 aa13.65□□□□□ -0.22
RABGAP1-213ENST00000616002 IQCA1LA6NCM1 817 aa13.65□□□□□ -0.22
RABGAP1-213ENST00000616002 TMPOP42166 694 aaKnown RBP13.65□□□□□ -0.22
RABGAP1-213ENST00000616002 SMC4Q9NTJ3 1288 aa13.65□□□□□ -0.22
RABGAP1-213ENST00000616002 RRP7AQ9Y3A4 280 aaKnown RBP13.65□□□□□ -0.22
RABGAP1-213ENST00000616002 SIPA1L3O60292 1781 aaPredicted RBP13.64□□□□□ -0.23
RABGAP1-213ENST00000616002 CACNA1SQ13698 1873 aa13.64□□□□□ -0.23
RABGAP1-213ENST00000616002 BTBD11A6QL63 1104 aa13.64□□□□□ -0.23
RABGAP1-213ENST00000616002 POTEIP0CG38 1075 aa13.64□□□□□ -0.23
RABGAP1-213ENST00000616002 POTEJP0CG39 1038 aa13.64□□□□□ -0.23
RABGAP1-213ENST00000616002 U2AF1L5P0DN76 240 aaPredicted RBP13.64□□□□□ -0.23
RABGAP1-213ENST00000616002 U2AF1Q01081 240 aaKnown RBP eCLIP13.64□□□□□ -0.23
RABGAP1-213ENST00000616002 GLIPR1L2Q4G1C9 344 aa13.64□□□□□ -0.23
RABGAP1-213ENST00000616002 NBPF5PQ86XG9 351 aaPredicted RBP13.64□□□□□ -0.23
RABGAP1-213ENST00000616002 GCC1Q96CN9 775 aa13.64□□□□□ -0.23
RABGAP1-213ENST00000616002 GRPEL1Q9HAV7 217 aa13.64□□□□□ -0.23
RABGAP1-213ENST00000616002 TNNQ9UQP3 1299 aa13.64□□□□□ -0.23
RABGAP1-213ENST00000616002 RAB3GAP1Q15042 981 aa13.63□□□□□ -0.23
RABGAP1-213ENST00000616002 SLC24A3Q9HC58 644 aa13.63□□□□□ -0.23
RABGAP1-213ENST00000616002 TRIM35Q9UPQ4 493 aa13.63□□□□□ -0.23
RABGAP1-213ENST00000616002 CEMIPQ8WUJ3 1361 aa13.63□□□□□ -0.23
RABGAP1-213ENST00000616002 EXOSC9Q06265 439 aaKnown RBP13.62□□□□□ -0.23
RABGAP1-213ENST00000616002 CLEC4GQ6UXB4 293 aa13.62□□□□□ -0.23
RABGAP1-213ENST00000616002 LDHDQ86WU2 507 aa13.62□□□□□ -0.23
RABGAP1-213ENST00000616002 SSH1Q8WYL5 1049 aa13.62□□□□□ -0.23
RABGAP1-213ENST00000616002 ZNF652Q9Y2D9 606 aa13.62□□□□□ -0.23
RABGAP1-213ENST00000616002 KCNQ3O43525 872 aa13.62□□□□□ -0.23
RABGAP1-213ENST00000616002 RRP9O43818 475 aaKnown RBP13.62□□□□□ -0.23
RABGAP1-213ENST00000616002 GTPBP6O43824 516 aaPredicted RBP13.62□□□□□ -0.23
RABGAP1-213ENST00000616002 PIP4K2AP48426 406 aaPredicted RBP13.62□□□□□ -0.23
RABGAP1-213ENST00000616002 MFAP1P55081 439 aaKnown RBP13.62□□□□□ -0.23
RABGAP1-213ENST00000616002 CCDC93Q567U6 631 aa13.62□□□□□ -0.23
RABGAP1-213ENST00000616002 USP16Q9Y5T5 823 aa13.62□□□□□ -0.23
RABGAP1-213ENST00000616002 BCORQ6W2J9 1755 aa13.61□□□□□ -0.23
RABGAP1-213ENST00000616002 ARFGEF2Q9Y6D5 1785 aa13.61□□□□□ -0.23
RABGAP1-213ENST00000616002 IGSF3O75054 1194 aa13.61□□□□□ -0.23
RABGAP1-213ENST00000616002 NPR1P16066 1061 aa13.61□□□□□ -0.23
RABGAP1-213ENST00000616002 PRKAR2BP31323 418 aa13.61□□□□□ -0.23
RABGAP1-213ENST00000616002 CALD1Q05682 793 aaKnown RBP13.61□□□□□ -0.23
RABGAP1-213ENST00000616002 L3MBTL3Q96JM7 780 aaPredicted RBP13.61□□□□□ -0.23
RABGAP1-213ENST00000616002 TAF1DQ9H5J8 278 aaPredicted RBP13.61□□□□□ -0.23
RABGAP1-213ENST00000616002 CNTNAP1P78357 1384 aa13.6□□□□□ -0.23
RABGAP1-213ENST00000616002 SCN4AP35499 1836 aa13.6□□□□□ -0.23
RABGAP1-213ENST00000616002 EAPPQ56P03 285 aaPredicted RBP13.6□□□□□ -0.23
RABGAP1-213ENST00000616002 TPTE2Q6XPS3 522 aa13.6□□□□□ -0.23
RABGAP1-213ENST00000616002 CHD1LQ86WJ1 897 aa13.6□□□□□ -0.23
RABGAP1-213ENST00000616002 C7orf43Q8WVR3 580 aa13.6□□□□□ -0.23
RABGAP1-213ENST00000616002 PHACTR3Q96KR7 559 aa13.6□□□□□ -0.23
RABGAP1-213ENST00000616002 BCL2L13Q9BXK5 485 aa13.6□□□□□ -0.23
RABGAP1-213ENST00000616002 PASKQ96RG2 1323 aa13.59□□□□□ -0.23
RABGAP1-213ENST00000616002 ESPNB1AK53 854 aa13.59□□□□□ -0.23
RABGAP1-213ENST00000616002 SNRPA1P09661 255 aaKnown RBP13.59□□□□□ -0.23
RABGAP1-213ENST00000616002 FKBP4Q02790 459 aaKnown RBP eCLIP13.59□□□□□ -0.23
RABGAP1-213ENST00000616002 ITPRIPQ8IWB1 547 aa13.59□□□□□ -0.23
RABGAP1-213ENST00000616002 ZC3H15Q8WU90 426 aaKnown RBP13.59□□□□□ -0.23
RABGAP1-213ENST00000616002 RTF1Q92541 710 aaKnown RBP13.59□□□□□ -0.23
RABGAP1-213ENST00000616002 AIDAQ96BJ3 306 aa13.59□□□□□ -0.23
RABGAP1-213ENST00000616002 NOB1Q9ULX3 412 aaKnown RBP13.59□□□□□ -0.23
RABGAP1-213ENST00000616002 PRAMEF22A3QJZ6 481 aa13.58□□□□□ -0.23
RABGAP1-213ENST00000616002 TMEM88BA6NKF7 163 aa13.58□□□□□ -0.23
RABGAP1-213ENST00000616002 FOXN1O15353 648 aa13.58□□□□□ -0.23
RABGAP1-213ENST00000616002 RTKN2Q8IZC4 609 aa13.58□□□□□ -0.23
RABGAP1-213ENST00000616002 TMEM57Q8N5G2 664 aa13.58□□□□□ -0.23
RABGAP1-213ENST00000616002 ZNF277Q9NRM2 450 aaPredicted RBP13.58□□□□□ -0.23
RABGAP1-213ENST00000616002 HACL1Q9UJ83 578 aa13.58□□□□□ -0.23
RABGAP1-213ENST00000616002 NIP7Q9Y221 180 aaKnown RBP eCLIP13.58□□□□□ -0.23
RABGAP1-213ENST00000616002 CLEC11AQ9Y240 323 aa13.58□□□□□ -0.23
RABGAP1-213ENST00000616002 KLRG2A4D1S0 409 aaPredicted RBP13.58□□□□□ -0.24
RABGAP1-213ENST00000616002 TERF1P54274 439 aa13.58□□□□□ -0.24
RABGAP1-213ENST00000616002 TNPO1Q92973 898 aaKnown RBP13.58□□□□□ -0.24
RABGAP1-213ENST00000616002 PPP1R9BQ96SB3 815 aa13.58□□□□□ -0.24
RABGAP1-213ENST00000616002 ZNF541Q9H0D2 1346 aa13.57□□□□□ -0.24
RABGAP1-213ENST00000616002 FAM177BA6PVY3 158 aa13.57□□□□□ -0.24
RABGAP1-213ENST00000616002 GOLGA6L22H0YM25 854 aa13.57□□□□□ -0.24
RABGAP1-213ENST00000616002 ITGBL1O95965 494 aaPredicted RBP13.57□□□□□ -0.24
RABGAP1-213ENST00000616002 GTF2E1P29083 439 aaPredicted RBP13.57□□□□□ -0.24
RABGAP1-213ENST00000616002 HS1BP3Q53T59 392 aa13.57□□□□□ -0.24
RABGAP1-213ENST00000616002 PNMA8AQ86V59 439 aaPredicted RBP13.57□□□□□ -0.24
RABGAP1-213ENST00000616002 PRDM10Q9NQV6 1147 aa13.57□□□□□ -0.24
RABGAP1-213ENST00000616002 TPM2P07951 284 aa13.56□□□□□ -0.24
RABGAP1-213ENST00000616002 ALDH1B1P30837 517 aa13.56□□□□□ -0.24
RABGAP1-213ENST00000616002 EPHX2P34913 555 aa13.56□□□□□ -0.24
RABGAP1-213ENST00000616002 CTCFP49711 727 aaPredicted RBP13.56□□□□□ -0.24
RABGAP1-213ENST00000616002 VEGFBP49765 207 aa13.56□□□□□ -0.24
RABGAP1-213ENST00000616002 CCDC173Q0VFZ6 552 aa13.56□□□□□ -0.24
RABGAP1-213ENST00000616002 OLFM4Q6UX06 510 aa13.56□□□□□ -0.24
RABGAP1-213ENST00000616002 MCM10Q7L590 875 aa13.56□□□□□ -0.24
RABGAP1-213ENST00000616002 KIF2CQ99661 725 aa13.56□□□□□ -0.24
RABGAP1-213ENST00000616002 NBPF26B4DH59 902 aa13.55□□□□□ -0.24
RABGAP1-213ENST00000616002 K7ELQ4 463 aaPredicted RBP13.55□□□□□ -0.24
RABGAP1-213ENST00000616002 HSP90AA1P07900 732 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms