RNA–Protein interactions for RNA: ENST00000615877.4

NLRC3-204, Transcript of NLR family CARD domain containing 3, humanhuman

TSL 2

Gene NLRC3, Length 6,602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-204ENST00000615877 CTAGE4Q8IX94 777 aa15.25■□□□□ 0.03
NLRC3-204ENST00000615877 SNX21Q969T3 373 aa15.25■□□□□ 0.03
NLRC3-204ENST00000615877 RNF41Q9H4P4 317 aaPredicted RBP15.25■□□□□ 0.03
NLRC3-204ENST00000615877 MAP3K2Q9Y2U5 619 aa15.25■□□□□ 0.03
NLRC3-204ENST00000615877 PTPN23Q9H3S7 1636 aa15.25■□□□□ 0.03
NLRC3-204ENST00000615877 IARSP41252 1262 aaKnown RBP15.25■□□□□ 0.03
NLRC3-204ENST00000615877 C8orf34Q49A92 452 aa15.25■□□□□ 0.03
NLRC3-204ENST00000615877 CCDC40Q4G0X9 1142 aa15.25■□□□□ 0.03
NLRC3-204ENST00000615877 CEP63Q96MT8 703 aa15.25■□□□□ 0.03
NLRC3-204ENST00000615877 RGS22Q8NE09 1264 aa15.25■□□□□ 0.03
NLRC3-204ENST00000615877 PYM1Q9BRP8 204 aaKnown RBP15.25■□□□□ 0.03
NLRC3-204ENST00000615877 IDEP14735 1019 aa15.24■□□□□ 0.03
NLRC3-204ENST00000615877 AMPD3Q01432 767 aa15.24■□□□□ 0.03
NLRC3-204ENST00000615877 IQSEC3Q9UPP2 1182 aaPredicted RBP15.24■□□□□ 0.03
NLRC3-204ENST00000615877 MAP3K1Q13233 1512 aa15.24■□□□□ 0.03
NLRC3-204ENST00000615877 TOP2BQ02880 1626 aa15.24■□□□□ 0.03
NLRC3-204ENST00000615877 SLU7O95391 586 aaKnown RBP15.24■□□□□ 0.03
NLRC3-204ENST00000615877 ARL1P40616 181 aaPredicted RBP15.24■□□□□ 0.03
NLRC3-204ENST00000615877 NOP2P46087 812 aaKnown RBP15.24■□□□□ 0.03
NLRC3-204ENST00000615877 FLIIQ13045 1269 aa15.24■□□□□ 0.03
NLRC3-204ENST00000615877 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.24■□□□□ 0.03
NLRC3-204ENST00000615877 ATP2C2O75185 946 aa15.24■□□□□ 0.03
NLRC3-204ENST00000615877 PRIM1P49642 420 aaKnown RBP15.24■□□□□ 0.03
NLRC3-204ENST00000615877 SDSP20132 328 aa15.24■□□□□ 0.03
NLRC3-204ENST00000615877 NECAB1Q8N987 351 aa15.24■□□□□ 0.03
NLRC3-204ENST00000615877 HLA-DOAP06340 250 aa15.23■□□□□ 0.03
NLRC3-204ENST00000615877 HSPA4P34932 840 aa15.23■□□□□ 0.03
NLRC3-204ENST00000615877 SYKP43405 635 aa15.23■□□□□ 0.03
NLRC3-204ENST00000615877 N4BP3O15049 544 aa15.23■□□□□ 0.03
NLRC3-204ENST00000615877 RBM25P49756 843 aaKnown RBP15.23■□□□□ 0.03
NLRC3-204ENST00000615877 CALML4Q96GE6 196 aa15.23■□□□□ 0.03
NLRC3-204ENST00000615877 TTC12Q9H892 705 aaPredicted RBP15.23■□□□□ 0.03
NLRC3-204ENST00000615877 KRT28Q7Z3Y7 464 aa15.23■□□□□ 0.03
NLRC3-204ENST00000615877 RNF216Q9NWF9 866 aaPredicted RBP15.23■□□□□ 0.03
NLRC3-204ENST00000615877 METAP2P50579 478 aaKnown RBP eCLIP15.23■□□□□ 0.03
NLRC3-204ENST00000615877 MCM6Q14566 821 aa15.23■□□□□ 0.03
NLRC3-204ENST00000615877 TMEM67Q5HYA8 995 aa15.23■□□□□ 0.03
NLRC3-204ENST00000615877 HS1BP3Q53T59 392 aa15.23■□□□□ 0.03
NLRC3-204ENST00000615877 CCDC61Q9Y6R9 512 aa15.23■□□□□ 0.03
NLRC3-204ENST00000615877 NBPF6Q5VWK0 638 aa15.22■□□□□ 0.03
NLRC3-204ENST00000615877 NBPF5PQ86XG9 351 aaPredicted RBP15.22■□□□□ 0.03
NLRC3-204ENST00000615877 NBPF4Q96M43 638 aa15.22■□□□□ 0.03
NLRC3-204ENST00000615877 AOPEPQ8N6M6 819 aa15.22■□□□□ 0.03
NLRC3-204ENST00000615877 FAM212AQ96EL1 285 aa15.22■□□□□ 0.03
NLRC3-204ENST00000615877 C8orf37Q96NL8 207 aa15.22■□□□□ 0.03
NLRC3-204ENST00000615877 SRRTQ9BXP5 876 aaKnown RBP15.22■□□□□ 0.03
NLRC3-204ENST00000615877 DNAJC25Q9H1X3 360 aa15.22■□□□□ 0.03
NLRC3-204ENST00000615877 SYNCQ9H7C4 482 aa15.22■□□□□ 0.03
NLRC3-204ENST00000615877 EMILIN1Q9Y6C2 1016 aa15.22■□□□□ 0.03
NLRC3-204ENST00000615877 CDK13Q14004 1512 aaKnown RBP15.22■□□□□ 0.03
NLRC3-204ENST00000615877 PCF11O94913 1555 aaKnown RBP15.22■□□□□ 0.03
NLRC3-204ENST00000615877 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.22■□□□□ 0.03
NLRC3-204ENST00000615877 V9GYY5 206 aaPredicted RBP15.22■□□□□ 0.03
NLRC3-204ENST00000615877 CTAGE1Q96RT6 745 aa15.22■□□□□ 0.03
NLRC3-204ENST00000615877 TCP11L1Q9NUJ3 509 aa15.22■□□□□ 0.03
NLRC3-204ENST00000615877 HYPKQ9NX55 129 aa15.22■□□□□ 0.03
NLRC3-204ENST00000615877 VEZTQ9HBM0 779 aa15.22■□□□□ 0.03
NLRC3-204ENST00000615877 MBIPQ9NS73 344 aa15.21■□□□□ 0.03
NLRC3-204ENST00000615877 F13A1P00488 732 aa15.21■□□□□ 0.03
NLRC3-204ENST00000615877 TUBB4AP04350 444 aa15.21■□□□□ 0.03
NLRC3-204ENST00000615877 SLC26A6Q9BXS9 759 aa15.21■□□□□ 0.03
NLRC3-204ENST00000615877 SSX2IPQ9Y2D8 614 aa15.21■□□□□ 0.03
NLRC3-204ENST00000615877 RAB3GAP1Q15042 981 aa15.21■□□□□ 0.03
NLRC3-204ENST00000615877 LDHAL6AQ6ZMR3 332 aa15.21■□□□□ 0.03
NLRC3-204ENST00000615877 GOLGA1Q92805 767 aa15.21■□□□□ 0.03
NLRC3-204ENST00000615877 OTUD6BQ8N6M0 293 aa15.21■□□□□ 0.03
NLRC3-204ENST00000615877 NCOA7Q8NI08 942 aa15.21■□□□□ 0.03
NLRC3-204ENST00000615877 IL16Q14005 1332 aa15.21■□□□□ 0.02
NLRC3-204ENST00000615877 SYT1P21579 422 aa15.21■□□□□ 0.02
NLRC3-204ENST00000615877 TRIM47Q96LD4 638 aa15.21■□□□□ 0.02
NLRC3-204ENST00000615877 AMOTL2Q9Y2J4 779 aa15.21■□□□□ 0.02
NLRC3-204ENST00000615877 FSD2A1L4K1 749 aa15.2■□□□□ 0.02
NLRC3-204ENST00000615877 IFI16Q16666 785 aaKnown RBP15.2■□□□□ 0.02
NLRC3-204ENST00000615877 MPHOSPH6Q99547 160 aaKnown RBP15.2■□□□□ 0.02
NLRC3-204ENST00000615877 RMND1Q9NWS8 449 aa15.2■□□□□ 0.02
NLRC3-204ENST00000615877 DACT1Q9NYF0 836 aa15.2■□□□□ 0.02
NLRC3-204ENST00000615877 AKNAD1Q5T1N1 836 aa15.2■□□□□ 0.02
NLRC3-204ENST00000615877 PPP1R42Q7Z4L9 355 aa15.2■□□□□ 0.02
NLRC3-204ENST00000615877 MICU3Q86XE3 530 aa15.2■□□□□ 0.02
NLRC3-204ENST00000615877 BIN2Q9UBW5 565 aaPredicted RBP15.2■□□□□ 0.02
NLRC3-204ENST00000615877 PHF8Q9UPP1 1060 aa15.2■□□□□ 0.02
NLRC3-204ENST00000615877 OPA1O60313 960 aa15.2■□□□□ 0.02
NLRC3-204ENST00000615877 HMGB2P26583 209 aaKnown RBP15.2■□□□□ 0.02
NLRC3-204ENST00000615877 C6orf163Q5TEZ5 329 aa15.2■□□□□ 0.02
NLRC3-204ENST00000615877 CDC5LQ99459 802 aaKnown RBP15.2■□□□□ 0.02
NLRC3-204ENST00000615877 DBF4Q9UBU7 674 aaPredicted RBP15.2■□□□□ 0.02
NLRC3-204ENST00000615877 BAG3O95817 575 aa15.2■□□□□ 0.02
NLRC3-204ENST00000615877 BBXQ8WY36 941 aaPredicted RBP15.2■□□□□ 0.02
NLRC3-204ENST00000615877 MRPS27Q92552 414 aaKnown RBP15.2■□□□□ 0.02
NLRC3-204ENST00000615877 PCDHB15Q9Y5E8 787 aa15.2■□□□□ 0.02
NLRC3-204ENST00000615877 CYLC1P35663 651 aaPredicted RBP15.2■□□□□ 0.02
NLRC3-204ENST00000615877 RRAGBQ5VZM2 374 aa15.2■□□□□ 0.02
NLRC3-204ENST00000615877 KCNG4Q8TDN1 519 aa15.2■□□□□ 0.02
NLRC3-204ENST00000615877 ESYT1Q9BSJ8 1104 aa15.2■□□□□ 0.02
NLRC3-204ENST00000615877 CAPN2P17655 700 aa15.19■□□□□ 0.02
NLRC3-204ENST00000615877 AMOTQ4VCS5 1084 aa15.19■□□□□ 0.02
NLRC3-204ENST00000615877 ATP6V1AP38606 617 aa15.19■□□□□ 0.02
NLRC3-204ENST00000615877 MICALL1Q8N3F8 863 aa15.19■□□□□ 0.02
NLRC3-204ENST00000615877 CCDC155Q8N6L0 562 aa15.19■□□□□ 0.02
NLRC3-204ENST00000615877 FAM135AQ9P2D6 1515 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms