RNA–Protein interactions for RNA: ENST00000615665.4

SSBP2-220, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5 BASIC

Gene SSBP2, Length 4,465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-220ENST00000615665 LRRC2Q9BYS8 371 aa16.49■□□□□ 0.23
SSBP2-220ENST00000615665 MYO5BQ9ULV0 1848 aa16.49■□□□□ 0.23
SSBP2-220ENST00000615665 ITSN1Q15811 1721 aa16.49■□□□□ 0.23
SSBP2-220ENST00000615665 GUCY1B3Q02153 619 aa16.49■□□□□ 0.23
SSBP2-220ENST00000615665 JMYQ8N9B5 988 aa16.49■□□□□ 0.23
SSBP2-220ENST00000615665 DDX19AQ9NUU7 478 aaKnown RBP16.49■□□□□ 0.23
SSBP2-220ENST00000615665 UVSSAQ2YD98 709 aa16.49■□□□□ 0.23
SSBP2-220ENST00000615665 GIMAP6Q6P9H5 292 aa16.49■□□□□ 0.23
SSBP2-220ENST00000615665 CKAP2LQ8IYA6 745 aa16.49■□□□□ 0.23
SSBP2-220ENST00000615665 Q6ZUG5 572 aa16.48■□□□□ 0.23
SSBP2-220ENST00000615665 ZNF213O14771 459 aa16.48■□□□□ 0.23
SSBP2-220ENST00000615665 SLC27A2O14975 620 aa16.48■□□□□ 0.23
SSBP2-220ENST00000615665 TNNT3P45378 269 aaPredicted RBP16.48■□□□□ 0.23
SSBP2-220ENST00000615665 HSPA2P54652 639 aa16.48■□□□□ 0.23
SSBP2-220ENST00000615665 GNL3LQ9NVN8 582 aaKnown RBP16.48■□□□□ 0.23
SSBP2-220ENST00000615665 FSD2A1L4K1 749 aa16.48■□□□□ 0.23
SSBP2-220ENST00000615665 PTPRUQ92729 1446 aa16.48■□□□□ 0.23
SSBP2-220ENST00000615665 EAF2Q96CJ1 260 aaPredicted RBP16.47■□□□□ 0.23
SSBP2-220ENST00000615665 DBNDD2Q9BQY9 259 aa16.47■□□□□ 0.23
SSBP2-220ENST00000615665 CCDC69A6NI79 296 aa16.47■□□□□ 0.23
SSBP2-220ENST00000615665 POLA2Q14181 598 aa16.47■□□□□ 0.23
SSBP2-220ENST00000615665 KIF2CQ99661 725 aa16.47■□□□□ 0.23
SSBP2-220ENST00000615665 NOL10Q9BSC4 688 aaKnown RBP16.47■□□□□ 0.23
SSBP2-220ENST00000615665 RBSNQ9H1K0 784 aa16.47■□□□□ 0.23
SSBP2-220ENST00000615665 RRAGDQ9NQL2 400 aaPredicted RBP16.47■□□□□ 0.23
SSBP2-220ENST00000615665 XBP1P17861 261 aa16.47■□□□□ 0.23
SSBP2-220ENST00000615665 HAND2P61296 217 aa16.47■□□□□ 0.23
SSBP2-220ENST00000615665 AMOTL1Q8IY63 956 aa16.47■□□□□ 0.23
SSBP2-220ENST00000615665 PRAMEF22A3QJZ6 481 aa16.47■□□□□ 0.23
SSBP2-220ENST00000615665 IGHMBP2P38935 993 aaKnown RBP16.47■□□□□ 0.23
SSBP2-220ENST00000615665 TDO2P48775 406 aa16.47■□□□□ 0.23
SSBP2-220ENST00000615665 CREBRFQ8IUR6 639 aa16.47■□□□□ 0.23
SSBP2-220ENST00000615665 C8orf76Q96K31 380 aa16.47■□□□□ 0.23
SSBP2-220ENST00000615665 USP16Q9Y5T5 823 aa16.47■□□□□ 0.23
SSBP2-220ENST00000615665 EXOC5O00471 708 aa16.46■□□□□ 0.23
SSBP2-220ENST00000615665 TRIM22Q8IYM9 498 aa16.46■□□□□ 0.23
SSBP2-220ENST00000615665 STK11IPQ8N1F8 1099 aa16.46■□□□□ 0.23
SSBP2-220ENST00000615665 ADCY5O95622 1261 aa16.46■□□□□ 0.23
SSBP2-220ENST00000615665 MCM5P33992 734 aa16.46■□□□□ 0.23
SSBP2-220ENST00000615665 TPD52L1Q16890 204 aaPredicted RBP16.46■□□□□ 0.23
SSBP2-220ENST00000615665 RGS12O14924 1447 aa16.46■□□□□ 0.23
SSBP2-220ENST00000615665 GOLGA8BA8MQT2 603 aa16.46■□□□□ 0.23
SSBP2-220ENST00000615665 ATP2B1P20020 1258 aa16.46■□□□□ 0.23
SSBP2-220ENST00000615665 OLFM4Q6UX06 510 aa16.46■□□□□ 0.23
SSBP2-220ENST00000615665 ZFYP08048 801 aaPredicted RBP16.45■□□□□ 0.22
SSBP2-220ENST00000615665 CEP57L1Q8IYX8 460 aa16.45■□□□□ 0.22
SSBP2-220ENST00000615665 ZSCAN16Q9H4T2 348 aaPredicted RBP16.45■□□□□ 0.22
SSBP2-220ENST00000615665 ATP10DQ9P241 1426 aa16.45■□□□□ 0.22
SSBP2-220ENST00000615665 TM6SF1Q9BZW5 370 aa16.45■□□□□ 0.22
SSBP2-220ENST00000615665 ERBB3P21860 1342 aa16.45■□□□□ 0.22
SSBP2-220ENST00000615665 RPS6KB1P23443 525 aa16.45■□□□□ 0.22
SSBP2-220ENST00000615665 PTH1RQ03431 593 aa16.45■□□□□ 0.22
SSBP2-220ENST00000615665 LRP2BPQ9P2M1 347 aa16.45■□□□□ 0.22
SSBP2-220ENST00000615665 NUTM2BA6NNL0 878 aaPredicted RBP16.45■□□□□ 0.22
SSBP2-220ENST00000615665 NUTM2EB1AL46 878 aaPredicted RBP16.45■□□□□ 0.22
SSBP2-220ENST00000615665 GAS2L3Q86XJ1 694 aa16.45■□□□□ 0.22
SSBP2-220ENST00000615665 NUTM2AQ8IVF1 878 aaPredicted RBP16.45■□□□□ 0.22
SSBP2-220ENST00000615665 LSG1Q9H089 658 aaKnown RBP16.45■□□□□ 0.22
SSBP2-220ENST00000615665 NRKQ7Z2Y5 1582 aa16.45■□□□□ 0.22
SSBP2-220ENST00000615665 SMC2O95347 1197 aa16.44■□□□□ 0.22
SSBP2-220ENST00000615665 ATP2B3Q16720 1220 aa16.44■□□□□ 0.22
SSBP2-220ENST00000615665 PPFIA3O75145 1194 aa16.44■□□□□ 0.22
SSBP2-220ENST00000615665 TIMM10P62072 90 aa16.44■□□□□ 0.22
SSBP2-220ENST00000615665 DIP2AQ14689 1571 aa16.44■□□□□ 0.22
SSBP2-220ENST00000615665 TTF1Q15361 905 aaPredicted RBP16.43■□□□□ 0.22
SSBP2-220ENST00000615665 BRMS1Q9HCU9 246 aa16.43■□□□□ 0.22
SSBP2-220ENST00000615665 ADGRL3Q9HAR2 1447 aa16.43■□□□□ 0.22
SSBP2-220ENST00000615665 UQCRHLA0A096LP55 91 aa16.43■□□□□ 0.22
SSBP2-220ENST00000615665 A1BGP04217 495 aa16.43■□□□□ 0.22
SSBP2-220ENST00000615665 UQCRHP07919 91 aa16.43■□□□□ 0.22
SSBP2-220ENST00000615665 CCDC129Q6ZRS4 1044 aa16.43■□□□□ 0.22
SSBP2-220ENST00000615665 NAPBQ9H115 298 aa16.43■□□□□ 0.22
SSBP2-220ENST00000615665 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.43■□□□□ 0.22
SSBP2-220ENST00000615665 TMEM63CQ9P1W3 806 aa16.43■□□□□ 0.22
SSBP2-220ENST00000615665 RNF113AO15541 343 aaKnown RBP16.43■□□□□ 0.22
SSBP2-220ENST00000615665 SLC5A1P13866 664 aa16.43■□□□□ 0.22
SSBP2-220ENST00000615665 MAP3K12Q12852 859 aa16.43■□□□□ 0.22
SSBP2-220ENST00000615665 EYA2O00167 538 aa16.43■□□□□ 0.22
SSBP2-220ENST00000615665 REREQ9P2R6 1566 aa16.42■□□□□ 0.22
SSBP2-220ENST00000615665 CUL4AQ13619 759 aa16.42■□□□□ 0.22
SSBP2-220ENST00000615665 RASEFQ8IZ41 740 aa16.42■□□□□ 0.22
SSBP2-220ENST00000615665 CCDC191Q8NCU4 936 aa16.42■□□□□ 0.22
SSBP2-220ENST00000615665 PI4K2BQ8TCG2 481 aa16.42■□□□□ 0.22
SSBP2-220ENST00000615665 TMX4Q9H1E5 349 aaPredicted RBP16.42■□□□□ 0.22
SSBP2-220ENST00000615665 SETD1BQ9UPS6 1966 aaKnown RBP16.42■□□□□ 0.22
SSBP2-220ENST00000615665 ATP5JP18859 108 aa16.42■□□□□ 0.22
SSBP2-220ENST00000615665 HS1BP3Q53T59 392 aa16.42■□□□□ 0.22
SSBP2-220ENST00000615665 NCOA7Q8NI08 942 aa16.42■□□□□ 0.22
SSBP2-220ENST00000615665 NUP133Q8WUM0 1156 aa16.42■□□□□ 0.22
SSBP2-220ENST00000615665 CHAMP1Q96JM3 812 aa16.42■□□□□ 0.22
SSBP2-220ENST00000615665 NDUFB9Q9Y6M9 179 aa16.42■□□□□ 0.22
SSBP2-220ENST00000615665 NCAPD2Q15021 1401 aa16.42■□□□□ 0.22
SSBP2-220ENST00000615665 CTAGE5O15320 804 aa16.42■□□□□ 0.22
SSBP2-220ENST00000615665 HOMER1Q86YM7 354 aa16.42■□□□□ 0.22
SSBP2-220ENST00000615665 EDC3Q96F86 508 aaKnown RBP16.42■□□□□ 0.22
SSBP2-220ENST00000615665 MAP7D2Q96T17 732 aa16.42■□□□□ 0.22
SSBP2-220ENST00000615665 RAI14Q9P0K7 980 aa16.42■□□□□ 0.22
SSBP2-220ENST00000615665 TMEM94Q12767 1356 aa16.41■□□□□ 0.22
SSBP2-220ENST00000615665 DHX32Q7L7V1 743 aaKnown RBP16.41■□□□□ 0.22
SSBP2-220ENST00000615665 A0A0D9SFI3 127 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms