RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 GRAPLQ8TC17 118 aaPredicted RBP21.28■■□□□ 1
CBWD3-211ENST00000615061 CELF1Q92879 486 aaKnown RBP21.28■■□□□ 1
CBWD3-211ENST00000615061 SMC4Q9NTJ3 1288 aa21.28■■□□□ 1
CBWD3-211ENST00000615061 CDHR2Q9BYE9 1310 aa21.28■■□□□ 1
CBWD3-211ENST00000615061 PDE8AO60658 829 aa21.28■■□□□ 1
CBWD3-211ENST00000615061 FKBP4Q02790 459 aaKnown RBP eCLIP21.28■■□□□ 1
CBWD3-211ENST00000615061 ALDH1L2Q3SY69 923 aa21.28■■□□□ 1
CBWD3-211ENST00000615061 SEC31BQ9NQW1 1179 aa21.28■■□□□ 1
CBWD3-211ENST00000615061 ZNF277Q9NRM2 450 aaPredicted RBP21.28■■□□□ 1
CBWD3-211ENST00000615061 RTKN2Q8IZC4 609 aa21.27■■□□□ 1
CBWD3-211ENST00000615061 CT47B1P0C2W7 299 aaPredicted RBP21.26■□□□□ 0.99
CBWD3-211ENST00000615061 CASP7P55210 303 aa21.26■□□□□ 0.99
CBWD3-211ENST00000615061 ATP6V0A2Q9Y487 856 aa21.26■□□□□ 0.99
CBWD3-211ENST00000615061 ZBED9Q6R2W3 1325 aa21.26■□□□□ 0.99
CBWD3-211ENST00000615061 BBOX1O75936 387 aa21.25■□□□□ 0.99
CBWD3-211ENST00000615061 GPBP1L1Q9HC44 474 aaPredicted RBP21.25■□□□□ 0.99
CBWD3-211ENST00000615061 PTPRCP08575 1304 aa21.24■□□□□ 0.99
CBWD3-211ENST00000615061 HSP90B1P14625 803 aaKnown RBP21.24■□□□□ 0.99
CBWD3-211ENST00000615061 RARSP54136 660 aaKnown RBP21.24■□□□□ 0.99
CBWD3-211ENST00000615061 CTSWP56202 376 aa21.24■□□□□ 0.99
CBWD3-211ENST00000615061 CC2D2BQ6DHV5 1058 aa21.24■□□□□ 0.99
CBWD3-211ENST00000615061 CCDC152Q4G0S7 254 aa21.23■□□□□ 0.99
CBWD3-211ENST00000615061 TTLL11Q8NHH1 800 aa21.23■□□□□ 0.99
CBWD3-211ENST00000615061 PSMD1Q99460 953 aa21.23■□□□□ 0.99
CBWD3-211ENST00000615061 LRRC37AA6NMS7 1700 aa21.23■□□□□ 0.99
CBWD3-211ENST00000615061 SP8Q8IXZ3 490 aa21.23■□□□□ 0.99
CBWD3-211ENST00000615061 SRCIN1Q9C0H9 1055 aa21.23■□□□□ 0.99
CBWD3-211ENST00000615061 GREM2Q9H772 168 aa21.22■□□□□ 0.99
CBWD3-211ENST00000615061 SPEF2Q9C093 1822 aa21.22■□□□□ 0.99
CBWD3-211ENST00000615061 COL4A5P29400 1685 aa21.21■□□□□ 0.99
CBWD3-211ENST00000615061 IARSP41252 1262 aaKnown RBP21.21■□□□□ 0.99
CBWD3-211ENST00000615061 RPS8P62241 208 aaKnown RBP21.21■□□□□ 0.99
CBWD3-211ENST00000615061 NOB1Q9ULX3 412 aaKnown RBP21.21■□□□□ 0.99
CBWD3-211ENST00000615061 GRM8O00222 908 aa21.2■□□□□ 0.99
CBWD3-211ENST00000615061 PLA2G12BQ9BX93 195 aa21.2■□□□□ 0.99
CBWD3-211ENST00000615061 TMX4Q9H1E5 349 aaPredicted RBP21.2■□□□□ 0.99
CBWD3-211ENST00000615061 NMRK2Q9NPI5 230 aa21.2■□□□□ 0.99
CBWD3-211ENST00000615061 ZC3H4Q9UPT8 1303 aaKnown RBP21.2■□□□□ 0.98
CBWD3-211ENST00000615061 ALDH1L1O75891 902 aa21.2■□□□□ 0.98
CBWD3-211ENST00000615061 MPNDQ8N594 471 aa21.19■□□□□ 0.98
CBWD3-211ENST00000615061 C9orf78Q9NZ63 289 aaPredicted RBP21.19■□□□□ 0.98
CBWD3-211ENST00000615061 DUOX1Q9NRD9 1551 aa21.19■□□□□ 0.98
CBWD3-211ENST00000615061 BCAR3O75815 825 aa21.18■□□□□ 0.98
CBWD3-211ENST00000615061 BRPF1P55201 1214 aaPredicted RBP21.18■□□□□ 0.98
CBWD3-211ENST00000615061 GRIPAP1Q4V328 841 aa21.18■□□□□ 0.98
CBWD3-211ENST00000615061 EPHA10Q5JZY3 1008 aa21.18■□□□□ 0.98
CBWD3-211ENST00000615061 DPP8Q6V1X1 898 aaPredicted RBP21.18■□□□□ 0.98
CBWD3-211ENST00000615061 NBPF7P0C2Y1 421 aaPredicted RBP21.18■□□□□ 0.98
CBWD3-211ENST00000615061 FAM161AQ3B820 660 aa21.18■□□□□ 0.98
CBWD3-211ENST00000615061 TMC4Q7Z404 712 aa21.18■□□□□ 0.98
CBWD3-211ENST00000615061 GLTPD2A6NH11 291 aa21.17■□□□□ 0.98
CBWD3-211ENST00000615061 FOXO4P98177 505 aa21.17■□□□□ 0.98
CBWD3-211ENST00000615061 NSFL1CQ9UNZ2 370 aaKnown RBP21.17■□□□□ 0.98
CBWD3-211ENST00000615061 LTBP1Q14766 1721 aa21.16■□□□□ 0.98
CBWD3-211ENST00000615061 KIF3CO14782 793 aa21.16■□□□□ 0.98
CBWD3-211ENST00000615061 CSF1RP07333 972 aa21.16■□□□□ 0.98
CBWD3-211ENST00000615061 GPSM2P81274 684 aa21.16■□□□□ 0.98
CBWD3-211ENST00000615061 AOC3Q16853 763 aa21.16■□□□□ 0.98
CBWD3-211ENST00000615061 RTFDC1Q9BY42 306 aaPredicted RBP21.16■□□□□ 0.98
CBWD3-211ENST00000615061 KDM2BQ8NHM5 1336 aa21.16■□□□□ 0.98
CBWD3-211ENST00000615061 RTL9Q8NET4 1388 aa21.15■□□□□ 0.98
CBWD3-211ENST00000615061 ANKRD18AQ8IVF6 992 aa21.15■□□□□ 0.98
CBWD3-211ENST00000615061 LARGE2Q8N3Y3 721 aa21.15■□□□□ 0.98
CBWD3-211ENST00000615061 PPIP5K2O43314 1243 aa21.15■□□□□ 0.98
CBWD3-211ENST00000615061 ITGA6P23229 1130 aa21.15■□□□□ 0.98
CBWD3-211ENST00000615061 SUCLG2Q96I99 432 aa21.15■□□□□ 0.98
CBWD3-211ENST00000615061 RRAGCQ9HB90 399 aa21.15■□□□□ 0.98
CBWD3-211ENST00000615061 ZNF541Q9H0D2 1346 aa21.14■□□□□ 0.98
CBWD3-211ENST00000615061 DDNO94850 711 aaPredicted RBP21.14■□□□□ 0.97
CBWD3-211ENST00000615061 KAZALD1Q96I82 304 aa21.14■□□□□ 0.97
CBWD3-211ENST00000615061 CDC5LQ99459 802 aaKnown RBP21.14■□□□□ 0.97
CBWD3-211ENST00000615061 TNNQ9UQP3 1299 aa21.14■□□□□ 0.97
CBWD3-211ENST00000615061 LMBR1LQ6UX01 489 aa21.13■□□□□ 0.97
CBWD3-211ENST00000615061 JDP2Q8WYK2 163 aa21.13■□□□□ 0.97
CBWD3-211ENST00000615061 GPR101Q96P66 508 aaPredicted RBP21.13■□□□□ 0.97
CBWD3-211ENST00000615061 POLLQ9UGP5 575 aa21.13■□□□□ 0.97
CBWD3-211ENST00000615061 UTYO14607 1347 aa21.13■□□□□ 0.97
CBWD3-211ENST00000615061 KIF16BQ96L93 1317 aa21.13■□□□□ 0.97
CBWD3-211ENST00000615061 DPY19L2Q6NUT2 758 aa21.13■□□□□ 0.97
CBWD3-211ENST00000615061 FRAT1Q92837 279 aaPredicted RBP21.13■□□□□ 0.97
CBWD3-211ENST00000615061 API5Q9BZZ5 524 aaKnown RBP21.13■□□□□ 0.97
CBWD3-211ENST00000615061 USP44Q9H0E7 712 aa21.13■□□□□ 0.97
CBWD3-211ENST00000615061 CHMP3Q9Y3E7 222 aa21.13■□□□□ 0.97
CBWD3-211ENST00000615061 FZD9O00144 591 aa21.12■□□□□ 0.97
CBWD3-211ENST00000615061 SUPT20HQ8NEM7 779 aa21.11■□□□□ 0.97
CBWD3-211ENST00000615061 ANKIB1Q9P2G1 1089 aa21.11■□□□□ 0.97
CBWD3-211ENST00000615061 WDR90Q96KV7 1748 aa21.1■□□□□ 0.97
CBWD3-211ENST00000615061 WTIPA6NIX2 430 aaPredicted RBP21.1■□□□□ 0.97
CBWD3-211ENST00000615061 POTECB2RU33 542 aa21.1■□□□□ 0.97
CBWD3-211ENST00000615061 C6orf229H3BNL8 230 aa21.1■□□□□ 0.97
CBWD3-211ENST00000615061 KIAA2012Q0VF49 1180 aa21.1■□□□□ 0.97
CBWD3-211ENST00000615061 TBC1D16Q8TBP0 767 aa21.1■□□□□ 0.97
CBWD3-211ENST00000615061 BSDC1Q9NW68 430 aaPredicted RBP21.1■□□□□ 0.97
CBWD3-211ENST00000615061 CEP350Q5VT06 3117 aa21.1■□□□□ 0.97
CBWD3-211ENST00000615061 TRIM27P14373 513 aa21.1■□□□□ 0.97
CBWD3-211ENST00000615061 ARHGAP45Q92619 1136 aa21.1■□□□□ 0.97
CBWD3-211ENST00000615061 BICC1Q9H694 974 aaKnown RBP21.1■□□□□ 0.97
CBWD3-211ENST00000615061 MINPP1Q9UNW1 487 aa21.1■□□□□ 0.97
CBWD3-211ENST00000615061 ANKRD18BA2A2Z9 1011 aa21.09■□□□□ 0.97
CBWD3-211ENST00000615061 RIMBP2O15034 1052 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms