RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 SRGNP10124 158 aa10.09□□□□□ -0.79
PCDH9-205ENST00000614931 ST5P78524 1137 aa10.09□□□□□ -0.79
PCDH9-205ENST00000614931 HSP90AB3PQ58FF7 597 aa10.09□□□□□ -0.79
PCDH9-205ENST00000614931 EPHA10Q5JZY3 1008 aa10.09□□□□□ -0.79
PCDH9-205ENST00000614931 TPTE2Q6XPS3 522 aa10.09□□□□□ -0.79
PCDH9-205ENST00000614931 UBE3BQ7Z3V4 1068 aa10.09□□□□□ -0.79
PCDH9-205ENST00000614931 NBPF5PQ86XG9 351 aaPredicted RBP10.09□□□□□ -0.79
PCDH9-205ENST00000614931 NIP7Q9Y221 180 aaKnown RBP eCLIP10.09□□□□□ -0.79
PCDH9-205ENST00000614931 KDM2BQ8NHM5 1336 aa10.08□□□□□ -0.8
PCDH9-205ENST00000614931 KLRG2A4D1S0 409 aaPredicted RBP10.08□□□□□ -0.8
PCDH9-205ENST00000614931 KIF3CO14782 793 aa10.08□□□□□ -0.8
PCDH9-205ENST00000614931 NPHP1O15259 732 aa10.08□□□□□ -0.8
PCDH9-205ENST00000614931 NTSR2O95665 410 aa10.08□□□□□ -0.8
PCDH9-205ENST00000614931 AAMPQ13685 434 aa10.08□□□□□ -0.8
PCDH9-205ENST00000614931 RTL5Q5HYW3 569 aaPredicted RBP10.08□□□□□ -0.8
PCDH9-205ENST00000614931 SUSD4Q5VX71 490 aa10.08□□□□□ -0.8
PCDH9-205ENST00000614931 STYK1Q6J9G0 422 aa10.08□□□□□ -0.8
PCDH9-205ENST00000614931 CEP85Q6P2H3 762 aa10.08□□□□□ -0.8
PCDH9-205ENST00000614931 ANKRD44Q8N8A2 993 aa10.08□□□□□ -0.8
PCDH9-205ENST00000614931 CNKSR1Q969H4 720 aa10.08□□□□□ -0.8
PCDH9-205ENST00000614931 ZNF622Q969S3 477 aaKnown RBP eCLIP10.08□□□□□ -0.8
PCDH9-205ENST00000614931 C9orf78Q9NZ63 289 aaPredicted RBP10.08□□□□□ -0.8
PCDH9-205ENST00000614931 RNF181Q9P0P0 153 aa10.08□□□□□ -0.8
PCDH9-205ENST00000614931 ABCC12Q96J65 1359 aa10.08□□□□□ -0.8
PCDH9-205ENST00000614931 A0A1B0GUL6 1792 aa10.08□□□□□ -0.8
PCDH9-205ENST00000614931 PNMA6EA0A0J9YXQ4 647 aa10.07□□□□□ -0.8
PCDH9-205ENST00000614931 FAM177BA6PVY3 158 aa10.07□□□□□ -0.8
PCDH9-205ENST00000614931 GNAI2P04899 355 aa10.07□□□□□ -0.8
PCDH9-205ENST00000614931 PCCAP05165 728 aaPredicted RBP10.07□□□□□ -0.8
PCDH9-205ENST00000614931 PRELPP51888 382 aa10.07□□□□□ -0.8
PCDH9-205ENST00000614931 RASSF7Q02833 373 aa10.07□□□□□ -0.8
PCDH9-205ENST00000614931 FAM89AQ96GI7 184 aa10.07□□□□□ -0.8
PCDH9-205ENST00000614931 MASTLQ96GX5 879 aa10.07□□□□□ -0.8
PCDH9-205ENST00000614931 CCDC136Q96JN2 1154 aa10.07□□□□□ -0.8
PCDH9-205ENST00000614931 SLX4Q8IY92 1834 aa10.06□□□□□ -0.8
PCDH9-205ENST00000614931 NFKBIEO00221 500 aa10.06□□□□□ -0.8
PCDH9-205ENST00000614931 C21orf2O43822 256 aa10.06□□□□□ -0.8
PCDH9-205ENST00000614931 LMNB1P20700 586 aa10.06□□□□□ -0.8
PCDH9-205ENST00000614931 FOXO4P98177 505 aa10.06□□□□□ -0.8
PCDH9-205ENST00000614931 PARP10Q53GL7 1025 aa10.06□□□□□ -0.8
PCDH9-205ENST00000614931 ZBTB38Q8NAP3 1195 aaPredicted RBP10.06□□□□□ -0.8
PCDH9-205ENST00000614931 CHMP4BQ9H444 224 aaKnown RBP10.06□□□□□ -0.8
PCDH9-205ENST00000614931 BICC1Q9H694 974 aaKnown RBP10.06□□□□□ -0.8
PCDH9-205ENST00000614931 FER1L6Q2WGJ9 1857 aa10.06□□□□□ -0.8
PCDH9-205ENST00000614931 CDHR2Q9BYE9 1310 aa10.06□□□□□ -0.8
PCDH9-205ENST00000614931 ZC3H4Q9UPT8 1303 aaKnown RBP10.06□□□□□ -0.8
PCDH9-205ENST00000614931 CCDC88AQ3V6T2 1871 aa10.05□□□□□ -0.8
PCDH9-205ENST00000614931 NPR1P16066 1061 aa10.05□□□□□ -0.8
PCDH9-205ENST00000614931 ATP8B2P98198 1209 aa10.05□□□□□ -0.8
PCDH9-205ENST00000614931 HDAC1Q13547 482 aaPredicted RBP10.05□□□□□ -0.8
PCDH9-205ENST00000614931 POLA2Q14181 598 aa10.05□□□□□ -0.8
PCDH9-205ENST00000614931 PRPF40BQ6NWY9 871 aaKnown RBP10.05□□□□□ -0.8
PCDH9-205ENST00000614931 NUTM1Q86Y26 1132 aa10.05□□□□□ -0.8
PCDH9-205ENST00000614931 C7orf43Q8WVR3 580 aa10.05□□□□□ -0.8
PCDH9-205ENST00000614931 NYXQ9GZU5 481 aa10.05□□□□□ -0.8
PCDH9-205ENST00000614931 NMRK2Q9NPI5 230 aa10.05□□□□□ -0.8
PCDH9-205ENST00000614931 TRMT112Q9UI30 125 aaKnown RBP10.05□□□□□ -0.8
PCDH9-205ENST00000614931 LTBP3Q9NS15 1303 aa10.05□□□□□ -0.8
PCDH9-205ENST00000614931 CACNA1SQ13698 1873 aa10.04□□□□□ -0.8
PCDH9-205ENST00000614931 MTX1Q13505 466 aa10.04□□□□□ -0.8
PCDH9-205ENST00000614931 RABL6Q3YEC7 729 aaPredicted RBP10.04□□□□□ -0.8
PCDH9-205ENST00000614931 ERFEQ4G0M1 354 aa10.04□□□□□ -0.8
PCDH9-205ENST00000614931 SOGA3Q5TF21 947 aa10.04□□□□□ -0.8
PCDH9-205ENST00000614931 C3orf67Q6ZVT6 689 aa10.04□□□□□ -0.8
PCDH9-205ENST00000614931 PPP1R42Q7Z4L9 355 aa10.04□□□□□ -0.8
PCDH9-205ENST00000614931 SKAP1Q86WV1 359 aa10.04□□□□□ -0.8
PCDH9-205ENST00000614931 RPAP2Q8IXW5 612 aaPredicted RBP10.04□□□□□ -0.8
PCDH9-205ENST00000614931 UTP14AQ9BVJ6 771 aaKnown RBP10.04□□□□□ -0.8
PCDH9-205ENST00000614931 PLA2G12BQ9BX93 195 aa10.04□□□□□ -0.8
PCDH9-205ENST00000614931 RIC1Q4ADV7 1423 aa10.04□□□□□ -0.8
PCDH9-205ENST00000614931 SH3TC1Q8TE82 1336 aa10.04□□□□□ -0.8
PCDH9-205ENST00000614931 IRS4O14654 1257 aaPredicted RBP10.03□□□□□ -0.8
PCDH9-205ENST00000614931 TOMM70O94826 608 aa10.03□□□□□ -0.8
PCDH9-205ENST00000614931 HCLS1P14317 486 aaPredicted RBP10.03□□□□□ -0.8
PCDH9-205ENST00000614931 GTF2E1P29083 439 aaPredicted RBP10.03□□□□□ -0.8
PCDH9-205ENST00000614931 RFX5P48382 616 aaPredicted RBP10.03□□□□□ -0.8
PCDH9-205ENST00000614931 CRY2Q49AN0 593 aa10.03□□□□□ -0.8
PCDH9-205ENST00000614931 LMBR1LQ6UX01 489 aa10.03□□□□□ -0.8
PCDH9-205ENST00000614931 TIAM2Q8IVF5 1701 aa10.03□□□□□ -0.8
PCDH9-205ENST00000614931 SSH3Q8TE77 659 aa10.03□□□□□ -0.8
PCDH9-205ENST00000614931 ZNF219Q9P2Y4 722 aaPredicted RBP10.03□□□□□ -0.8
PCDH9-205ENST00000614931 DICER1Q9UPY3 1922 aaKnown RBP10.03□□□□□ -0.8
PCDH9-205ENST00000614931 GLTPD2A6NH11 291 aa10.02□□□□□ -0.81
PCDH9-205ENST00000614931 ALDH1B1P30837 517 aa10.02□□□□□ -0.81
PCDH9-205ENST00000614931 HOXA10P31260 410 aaPredicted RBP10.02□□□□□ -0.81
PCDH9-205ENST00000614931 KLHDC4Q8TBB5 520 aa10.02□□□□□ -0.81
PCDH9-205ENST00000614931 TAOK3Q9H2K8 898 aa10.02□□□□□ -0.81
PCDH9-205ENST00000614931 RWDD1Q9H446 243 aaPredicted RBP10.02□□□□□ -0.81
PCDH9-205ENST00000614931 PA2G4Q9UQ80 394 aaKnown RBP10.02□□□□□ -0.81
PCDH9-205ENST00000614931 SRGAP3O43295 1099 aa10.01□□□□□ -0.81
PCDH9-205ENST00000614931 PDE8AO60658 829 aa10.01□□□□□ -0.81
PCDH9-205ENST00000614931 CSF1RP07333 972 aa10.01□□□□□ -0.81
PCDH9-205ENST00000614931 HSPA6P17066 643 aa10.01□□□□□ -0.81
PCDH9-205ENST00000614931 CTSWP56202 376 aa10.01□□□□□ -0.81
PCDH9-205ENST00000614931 FAM161AQ3B820 660 aa10.01□□□□□ -0.81
PCDH9-205ENST00000614931 CCDC93Q567U6 631 aa10.01□□□□□ -0.81
PCDH9-205ENST00000614931 SLC10A5Q5PT55 438 aa10.01□□□□□ -0.81
PCDH9-205ENST00000614931 CENPQQ7L2Z9 268 aaPredicted RBP10.01□□□□□ -0.81
PCDH9-205ENST00000614931 SMC5Q8IY18 1101 aa10.01□□□□□ -0.81
PCDH9-205ENST00000614931 TTLL11Q8NHH1 800 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms