RNA–Protein interactions for RNA: ENST00000614502.4

PDLIM2-218, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-218ENST00000614502 ZNF853P0CG23 659 aa15.73■□□□□ 0.11
PDLIM2-218ENST00000614502 HSP90B1P14625 803 aaKnown RBP15.73■□□□□ 0.11
PDLIM2-218ENST00000614502 SP8Q8IXZ3 490 aa15.73■□□□□ 0.11
PDLIM2-218ENST00000614502 DDX60Q8IY21 1712 aaKnown RBP15.73■□□□□ 0.11
PDLIM2-218ENST00000614502 ABCC4O15439 1325 aa15.72■□□□□ 0.11
PDLIM2-218ENST00000614502 PPIP5K2O43314 1243 aa15.72■□□□□ 0.11
PDLIM2-218ENST00000614502 EPS15P42566 896 aa15.72■□□□□ 0.11
PDLIM2-218ENST00000614502 SCNN1DP51172 638 aa15.72■□□□□ 0.11
PDLIM2-218ENST00000614502 GRAPQ13588 217 aa15.72■□□□□ 0.11
PDLIM2-218ENST00000614502 GRAPLQ8TC17 118 aaPredicted RBP15.72■□□□□ 0.11
PDLIM2-218ENST00000614502 HCLS1P14317 486 aaPredicted RBP15.71■□□□□ 0.11
PDLIM2-218ENST00000614502 GOLGA2Q08379 1002 aa15.71■□□□□ 0.11
PDLIM2-218ENST00000614502 DPP8Q6V1X1 898 aaPredicted RBP15.71■□□□□ 0.11
PDLIM2-218ENST00000614502 ISCA1Q9BUE6 129 aa15.71■□□□□ 0.11
PDLIM2-218ENST00000614502 RTFDC1Q9BY42 306 aaPredicted RBP15.71■□□□□ 0.11
PDLIM2-218ENST00000614502 RASSF10A6NK89 507 aa15.7■□□□□ 0.1
PDLIM2-218ENST00000614502 TRIM28Q13263 835 aaKnown RBP15.7■□□□□ 0.1
PDLIM2-218ENST00000614502 AOC3Q16853 763 aa15.7■□□□□ 0.1
PDLIM2-218ENST00000614502 RIC3Q7Z5B4 369 aa15.7■□□□□ 0.1
PDLIM2-218ENST00000614502 MPNDQ8N594 471 aa15.7■□□□□ 0.1
PDLIM2-218ENST00000614502 WBP1LQ9NX94 342 aa15.7■□□□□ 0.1
PDLIM2-218ENST00000614502 DEFB115Q30KQ5 88 aa15.69■□□□□ 0.1
PDLIM2-218ENST00000614502 PRDM10Q9NQV6 1147 aa15.69■□□□□ 0.1
PDLIM2-218ENST00000614502 ABT1Q9ULW3 272 aaKnown RBP15.69■□□□□ 0.1
PDLIM2-218ENST00000614502 THSD7BQ9C0I4 1608 aa15.68■□□□□ 0.1
PDLIM2-218ENST00000614502 LRRC37AA6NMS7 1700 aa15.68■□□□□ 0.1
PDLIM2-218ENST00000614502 TRAF5O00463 557 aa15.68■□□□□ 0.1
PDLIM2-218ENST00000614502 DDX58O95786 925 aaKnown RBP15.68■□□□□ 0.1
PDLIM2-218ENST00000614502 CTCFP49711 727 aaPredicted RBP15.68■□□□□ 0.1
PDLIM2-218ENST00000614502 LBX1P52954 281 aa15.68■□□□□ 0.1
PDLIM2-218ENST00000614502 SF3B3Q15393 1217 aaKnown RBP15.68■□□□□ 0.1
PDLIM2-218ENST00000614502 CCDC30Q5VVM6 783 aa15.68■□□□□ 0.1
PDLIM2-218ENST00000614502 ZNF428Q96B54 188 aa15.68■□□□□ 0.1
PDLIM2-218ENST00000614502 AIDAQ96BJ3 306 aa15.68■□□□□ 0.1
PDLIM2-218ENST00000614502 ZNRF3Q9ULT6 936 aa15.68■□□□□ 0.1
PDLIM2-218ENST00000614502 WDR33Q9C0J8 1336 aaKnown RBP15.68■□□□□ 0.1
PDLIM2-218ENST00000614502 CACNA1FO60840 1977 aa15.67■□□□□ 0.1
PDLIM2-218ENST00000614502 ATP5J2-PTCD1G3V325 749 aa15.67■□□□□ 0.1
PDLIM2-218ENST00000614502 USP50Q70EL3 339 aaPredicted RBP15.67■□□□□ 0.1
PDLIM2-218ENST00000614502 HSPA8P11142 646 aaKnown RBP15.66■□□□□ 0.1
PDLIM2-218ENST00000614502 KIAA2012Q0VF49 1180 aa15.66■□□□□ 0.1
PDLIM2-218ENST00000614502 TNIP1Q15025 636 aa15.66■□□□□ 0.1
PDLIM2-218ENST00000614502 CCDC27Q2M243 656 aa15.66■□□□□ 0.1
PDLIM2-218ENST00000614502 CST9Q5W186 159 aa15.66■□□□□ 0.1
PDLIM2-218ENST00000614502 FAM89AQ96GI7 184 aa15.66■□□□□ 0.1
PDLIM2-218ENST00000614502 CDHR2Q9BYE9 1310 aa15.66■□□□□ 0.1
PDLIM2-218ENST00000614502 COL4A1P02462 1669 aa15.65■□□□□ 0.1
PDLIM2-218ENST00000614502 ELL2O00472 640 aaPredicted RBP15.65■□□□□ 0.1
PDLIM2-218ENST00000614502 IRS4O14654 1257 aaPredicted RBP15.65■□□□□ 0.1
PDLIM2-218ENST00000614502 CXCL9Q07325 125 aa15.65■□□□□ 0.1
PDLIM2-218ENST00000614502 NCBP3Q53F19 620 aaKnown RBP15.65■□□□□ 0.1
PDLIM2-218ENST00000614502 ZBTB38Q8NAP3 1195 aaPredicted RBP15.65■□□□□ 0.1
PDLIM2-218ENST00000614502 CCDC191Q8NCU4 936 aa15.65■□□□□ 0.1
PDLIM2-218ENST00000614502 GPRC5DQ9NZD1 345 aa15.65■□□□□ 0.1
PDLIM2-218ENST00000614502 DUOX1Q9NRD9 1551 aa15.65■□□□□ 0.1
PDLIM2-218ENST00000614502 POLR2AP24928 1970 aaKnown RBP15.64■□□□□ 0.09
PDLIM2-218ENST00000614502 GRM1Q13255 1194 aa15.64■□□□□ 0.09
PDLIM2-218ENST00000614502 CIAPIN1Q6FI81 312 aa15.64■□□□□ 0.09
PDLIM2-218ENST00000614502 CYP4F22Q6NT55 531 aa15.64■□□□□ 0.09
PDLIM2-218ENST00000614502 STK31Q9BXU1 1019 aa15.64■□□□□ 0.09
PDLIM2-218ENST00000614502 PHAXQ9H814 394 aaKnown RBP15.64■□□□□ 0.09
PDLIM2-218ENST00000614502 ADARB2Q9NS39 739 aaKnown RBP15.64■□□□□ 0.09
PDLIM2-218ENST00000614502 MYH3P11055 1940 aa15.63■□□□□ 0.09
PDLIM2-218ENST00000614502 ANP32CO43423 234 aa15.63■□□□□ 0.09
PDLIM2-218ENST00000614502 GMPSP49915 693 aaPredicted RBP15.63■□□□□ 0.09
PDLIM2-218ENST00000614502 C8orf58Q8NAV2 365 aa15.63■□□□□ 0.09
PDLIM2-218ENST00000614502 CAPNS2Q96L46 248 aa15.63■□□□□ 0.09
PDLIM2-218ENST00000614502 EYA3Q99504 573 aa15.63■□□□□ 0.09
PDLIM2-218ENST00000614502 MYD88Q99836 296 aa15.63■□□□□ 0.09
PDLIM2-218ENST00000614502 SHTN1A0MZ66 631 aa15.62■□□□□ 0.09
PDLIM2-218ENST00000614502 RAD17O75943 681 aa15.62■□□□□ 0.09
PDLIM2-218ENST00000614502 PCCAP05165 728 aaPredicted RBP15.62■□□□□ 0.09
PDLIM2-218ENST00000614502 WASHC4Q2M389 1173 aa15.62■□□□□ 0.09
PDLIM2-218ENST00000614502 PAXIP1Q6ZW49 1069 aaPredicted RBP15.62■□□□□ 0.09
PDLIM2-218ENST00000614502 METTL22Q9BUU2 404 aaPredicted RBP15.62■□□□□ 0.09
PDLIM2-218ENST00000614502 BCL2L13Q9BXK5 485 aa15.62■□□□□ 0.09
PDLIM2-218ENST00000614502 CWC25Q9NXE8 425 aaPredicted RBP15.62■□□□□ 0.09
PDLIM2-218ENST00000614502 NSFL1CQ9UNZ2 370 aaKnown RBP15.62■□□□□ 0.09
PDLIM2-218ENST00000614502 IL16Q14005 1332 aa15.62■□□□□ 0.09
PDLIM2-218ENST00000614502 PDE8AO60658 829 aa15.61■□□□□ 0.09
PDLIM2-218ENST00000614502 RPS8P62241 208 aaKnown RBP15.61■□□□□ 0.09
PDLIM2-218ENST00000614502 MAP2K1Q02750 393 aaPredicted RBP15.61■□□□□ 0.09
PDLIM2-218ENST00000614502 NEXNQ0ZGT2 675 aa15.61■□□□□ 0.09
PDLIM2-218ENST00000614502 CCDC152Q4G0S7 254 aa15.61■□□□□ 0.09
PDLIM2-218ENST00000614502 RTL5Q5HYW3 569 aaPredicted RBP15.61■□□□□ 0.09
PDLIM2-218ENST00000614502 CELF1Q92879 486 aaKnown RBP15.61■□□□□ 0.09
PDLIM2-218ENST00000614502 GLIS2Q9BZE0 524 aaPredicted RBP15.61■□□□□ 0.09
PDLIM2-218ENST00000614502 CASP8AP2Q9UKL3 1982 aa15.6■□□□□ 0.09
PDLIM2-218ENST00000614502 YDJCA8MPS7 323 aa15.6■□□□□ 0.09
PDLIM2-218ENST00000614502 C6orf229H3BNL8 230 aa15.6■□□□□ 0.09
PDLIM2-218ENST00000614502 AOC2O75106 756 aa15.6■□□□□ 0.09
PDLIM2-218ENST00000614502 HIRAP54198 1017 aaPredicted RBP15.6■□□□□ 0.09
PDLIM2-218ENST00000614502 WWC1Q8IX03 1113 aa15.6■□□□□ 0.09
PDLIM2-218ENST00000614502 TRPM4Q8TD43 1214 aa15.6■□□□□ 0.09
PDLIM2-218ENST00000614502 TLL2Q9Y6L7 1015 aa15.6■□□□□ 0.09
PDLIM2-218ENST00000614502 H7C1D1 291 aa15.59■□□□□ 0.09
PDLIM2-218ENST00000614502 KSR2Q6VAB6 950 aa15.59■□□□□ 0.09
PDLIM2-218ENST00000614502 ZC3H15Q8WU90 426 aaKnown RBP15.59■□□□□ 0.09
PDLIM2-218ENST00000614502 GPR101Q96P66 508 aaPredicted RBP15.59■□□□□ 0.09
PDLIM2-218ENST00000614502 MRS2Q9HD23 443 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms