RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 FOSBP53539 338 aa9.98□□□□□ -0.81
TTC28-208ENST00000612946 IFT20Q8IY31 132 aa9.98□□□□□ -0.81
TTC28-208ENST00000612946 ANKRD50Q9ULJ7 1429 aa9.98□□□□□ -0.81
TTC28-208ENST00000612946 CCDC92Q53HC0 331 aaPredicted RBP9.98□□□□□ -0.81
TTC28-208ENST00000612946 CCDC102BQ68D86 513 aa9.98□□□□□ -0.81
TTC28-208ENST00000612946 CCHCR1Q8TD31 782 aa9.98□□□□□ -0.81
TTC28-208ENST00000612946 ZNF330Q9Y3S2 320 aaPredicted RBP9.98□□□□□ -0.81
TTC28-208ENST00000612946 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.97□□□□□ -0.81
TTC28-208ENST00000612946 LARP1Q6PKG0 1096 aaKnown RBP9.97□□□□□ -0.81
TTC28-208ENST00000612946 GFM2Q969S9 779 aaKnown RBP9.97□□□□□ -0.81
TTC28-208ENST00000612946 C8orf76Q96K31 380 aa9.97□□□□□ -0.81
TTC28-208ENST00000612946 IRX1P78414 480 aaPredicted RBP9.97□□□□□ -0.81
TTC28-208ENST00000612946 DYNC1I2Q13409 638 aaKnown RBP9.97□□□□□ -0.81
TTC28-208ENST00000612946 CCDC62Q6P9F0 684 aa9.97□□□□□ -0.81
TTC28-208ENST00000612946 HOMER2Q9NSB8 354 aa9.97□□□□□ -0.81
TTC28-208ENST00000612946 CTDP1Q9Y5B0 961 aaPredicted RBP9.97□□□□□ -0.81
TTC28-208ENST00000612946 RNF8O76064 485 aa9.97□□□□□ -0.81
TTC28-208ENST00000612946 RAB11FIP4Q86YS3 637 aa9.97□□□□□ -0.81
TTC28-208ENST00000612946 KIF21AQ7Z4S6 1674 aa9.97□□□□□ -0.81
TTC28-208ENST00000612946 GTF3C6Q969F1 213 aa9.97□□□□□ -0.81
TTC28-208ENST00000612946 ATP2A2P16615 1042 aaKnown RBP9.97□□□□□ -0.81
TTC28-208ENST00000612946 RAB3IL1Q8TBN0 382 aa9.97□□□□□ -0.81
TTC28-208ENST00000612946 EXOC4Q96A65 974 aa9.97□□□□□ -0.81
TTC28-208ENST00000612946 AMOTQ4VCS5 1084 aa9.97□□□□□ -0.81
TTC28-208ENST00000612946 CNNM3Q8NE01 707 aa9.97□□□□□ -0.81
TTC28-208ENST00000612946 PPP1R9BQ96SB3 815 aa9.97□□□□□ -0.81
TTC28-208ENST00000612946 HIP1RO75146 1068 aa9.97□□□□□ -0.81
TTC28-208ENST00000612946 IBSPP21815 317 aaPredicted RBP9.97□□□□□ -0.81
TTC28-208ENST00000612946 EVCP57679 992 aa9.97□□□□□ -0.81
TTC28-208ENST00000612946 NBPF9Q3BBW0 867 aa9.97□□□□□ -0.81
TTC28-208ENST00000612946 WWC2Q6AWC2 1192 aa9.97□□□□□ -0.81
TTC28-208ENST00000612946 PANK2Q9BZ23 570 aa9.97□□□□□ -0.81
TTC28-208ENST00000612946 MXRA7P84157 204 aa9.96□□□□□ -0.81
TTC28-208ENST00000612946 MMS22LQ6ZRQ5 1243 aa9.96□□□□□ -0.81
TTC28-208ENST00000612946 JRKLQ9Y4A0 524 aa9.96□□□□□ -0.81
TTC28-208ENST00000612946 CSB-PGBD3P0DP91 1061 aa9.96□□□□□ -0.81
TTC28-208ENST00000612946 ANO6Q4KMQ2 910 aa9.96□□□□□ -0.81
TTC28-208ENST00000612946 PDCD7Q8N8D1 485 aaKnown RBP9.96□□□□□ -0.81
TTC28-208ENST00000612946 KIF5AQ12840 1032 aa9.96□□□□□ -0.81
TTC28-208ENST00000612946 MPNDQ8N594 471 aa9.96□□□□□ -0.81
TTC28-208ENST00000612946 FBXO3Q9UK99 471 aa9.96□□□□□ -0.81
TTC28-208ENST00000612946 TWISTNBQ3B726 338 aaPredicted RBP9.96□□□□□ -0.81
TTC28-208ENST00000612946 MCTP2Q6DN12 878 aa9.96□□□□□ -0.81
TTC28-208ENST00000612946 A0A087WUV0 522 aaPredicted RBP9.96□□□□□ -0.82
TTC28-208ENST00000612946 RASEFQ8IZ41 740 aa9.96□□□□□ -0.82
TTC28-208ENST00000612946 KIAA1524Q8TCG1 905 aa9.96□□□□□ -0.82
TTC28-208ENST00000612946 RMDN2Q96LZ7 410 aa9.96□□□□□ -0.82
TTC28-208ENST00000612946 RRAGDQ9NQL2 400 aaPredicted RBP9.96□□□□□ -0.82
TTC28-208ENST00000612946 GOLGA8KD6RF30 607 aa9.96□□□□□ -0.82
TTC28-208ENST00000612946 FLOT1O75955 427 aa9.96□□□□□ -0.82
TTC28-208ENST00000612946 APLFQ8IW19 511 aaPredicted RBP9.96□□□□□ -0.82
TTC28-208ENST00000612946 ANKRD24Q8TF21 1146 aa9.96□□□□□ -0.82
TTC28-208ENST00000612946 SH3GL3Q99963 347 aa9.96□□□□□ -0.82
TTC28-208ENST00000612946 IL16Q14005 1332 aa9.96□□□□□ -0.82
TTC28-208ENST00000612946 CUL7Q14999 1698 aa9.95□□□□□ -0.82
TTC28-208ENST00000612946 UTP14AQ9BVJ6 771 aaKnown RBP9.95□□□□□ -0.82
TTC28-208ENST00000612946 STRN4Q9NRL3 753 aa9.95□□□□□ -0.82
TTC28-208ENST00000612946 PFDN1O60925 122 aa9.95□□□□□ -0.82
TTC28-208ENST00000612946 CCDC186Q7Z3E2 898 aa9.95□□□□□ -0.82
TTC28-208ENST00000612946 SMARCC2Q8TAQ2 1214 aa9.95□□□□□ -0.82
TTC28-208ENST00000612946 ZWINTO95229 277 aa9.95□□□□□ -0.82
TTC28-208ENST00000612946 OAS2P29728 719 aaKnown RBP9.95□□□□□ -0.82
TTC28-208ENST00000612946 CCDC96Q2M329 555 aa9.95□□□□□ -0.82
TTC28-208ENST00000612946 TTC21AQ8NDW8 1320 aa9.95□□□□□ -0.82
TTC28-208ENST00000612946 VGLL3A8MV65 326 aa9.95□□□□□ -0.82
TTC28-208ENST00000612946 MICAL1Q8TDZ2 1067 aa9.95□□□□□ -0.82
TTC28-208ENST00000612946 CCDC26Q8TAB7 109 aa9.95□□□□□ -0.82
TTC28-208ENST00000612946 KIF1BPQ96EK5 621 aa9.95□□□□□ -0.82
TTC28-208ENST00000612946 PAF1Q8N7H5 531 aa9.95□□□□□ -0.82
TTC28-208ENST00000612946 PRIM1P49642 420 aaKnown RBP9.95□□□□□ -0.82
TTC28-208ENST00000612946 TAF7Q15545 349 aaPredicted RBP9.95□□□□□ -0.82
TTC28-208ENST00000612946 TOP2BQ02880 1626 aa9.95□□□□□ -0.82
TTC28-208ENST00000612946 CECR2Q9BXF3 1484 aa9.94□□□□□ -0.82
TTC28-208ENST00000612946 A0A087WZG4 1122 aa9.94□□□□□ -0.82
TTC28-208ENST00000612946 EFCAB8A8MWE9 144 aa9.94□□□□□ -0.82
TTC28-208ENST00000612946 STXBP4Q6ZWJ1 553 aa9.94□□□□□ -0.82
TTC28-208ENST00000612946 P3H4Q92791 437 aa9.94□□□□□ -0.82
TTC28-208ENST00000612946 NAPGQ99747 312 aaPredicted RBP9.94□□□□□ -0.82
TTC28-208ENST00000612946 PTPRCP08575 1304 aa9.94□□□□□ -0.82
TTC28-208ENST00000612946 RIOK3O14730 519 aaKnown RBP9.94□□□□□ -0.82
TTC28-208ENST00000612946 ZEB2O60315 1214 aa9.94□□□□□ -0.82
TTC28-208ENST00000612946 HOXA7P31268 230 aaPredicted RBP9.94□□□□□ -0.82
TTC28-208ENST00000612946 CREB3O43889 395 aa9.94□□□□□ -0.82
TTC28-208ENST00000612946 DEUP1Q05D60 604 aa9.94□□□□□ -0.82
TTC28-208ENST00000612946 CKAP2LQ8IYA6 745 aa9.94□□□□□ -0.82
TTC28-208ENST00000612946 ZFP91Q96JP5 570 aaPredicted RBP9.94□□□□□ -0.82
TTC28-208ENST00000612946 TMEM266Q2M3C6 531 aa9.94□□□□□ -0.82
TTC28-208ENST00000612946 PPP1R2P41236 205 aa9.94□□□□□ -0.82
TTC28-208ENST00000612946 CDCA7LQ96GN5 454 aa9.94□□□□□ -0.82
TTC28-208ENST00000612946 EIF2AQ9BY44 585 aaKnown RBP9.94□□□□□ -0.82
TTC28-208ENST00000612946 ACTN2P35609 894 aa9.94□□□□□ -0.82
TTC28-208ENST00000612946 MLECQ14165 292 aa9.94□□□□□ -0.82
TTC28-208ENST00000612946 NUF2Q9BZD4 464 aa9.94□□□□□ -0.82
TTC28-208ENST00000612946 CETN3O15182 167 aa9.94□□□□□ -0.82
TTC28-208ENST00000612946 MRPS27Q92552 414 aaKnown RBP9.94□□□□□ -0.82
TTC28-208ENST00000612946 MCUR1Q96AQ8 359 aa9.94□□□□□ -0.82
TTC28-208ENST00000612946 AKR1B10O60218 316 aa9.94□□□□□ -0.82
TTC28-208ENST00000612946 YY1AP1Q9H869 796 aa9.94□□□□□ -0.82
TTC28-208ENST00000612946 ZNF287Q9HBT7 754 aa9.94□□□□□ -0.82
TTC28-208ENST00000612946 UBAC1Q9BSL1 405 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms