RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 AOC3Q16853 763 aa9.84□□□□□ -0.83
PTCHD3P1-201ENST00000612350 VPS33BQ9H267 617 aa9.84□□□□□ -0.83
PTCHD3P1-201ENST00000612350 CNOT7Q9UIV1 285 aaKnown RBP9.84□□□□□ -0.83
PTCHD3P1-201ENST00000612350 CUL9Q8IWT3 2517 aa9.84□□□□□ -0.83
PTCHD3P1-201ENST00000612350 PAPPA2Q9BXP8 1791 aa9.83□□□□□ -0.84
PTCHD3P1-201ENST00000612350 HOXA10P31260 410 aaPredicted RBP9.83□□□□□ -0.84
PTCHD3P1-201ENST00000612350 RASAL3Q86YV0 1011 aa9.83□□□□□ -0.84
PTCHD3P1-201ENST00000612350 TTC5Q8N0Z6 440 aa9.83□□□□□ -0.84
PTCHD3P1-201ENST00000612350 BCL2L13Q9BXK5 485 aa9.83□□□□□ -0.84
PTCHD3P1-201ENST00000612350 NIP7Q9Y221 180 aaKnown RBP eCLIP9.83□□□□□ -0.84
PTCHD3P1-201ENST00000612350 RBBP6Q7Z6E9 1792 aaKnown RBP9.83□□□□□ -0.84
PTCHD3P1-201ENST00000612350 FAM177BA6PVY3 158 aa9.82□□□□□ -0.84
PTCHD3P1-201ENST00000612350 RGL2O15211 777 aa9.82□□□□□ -0.84
PTCHD3P1-201ENST00000612350 IL13P35225 146 aa9.82□□□□□ -0.84
PTCHD3P1-201ENST00000612350 CDCA8Q53HL2 280 aa9.82□□□□□ -0.84
PTCHD3P1-201ENST00000612350 INTS3Q68E01 1043 aaKnown RBP9.82□□□□□ -0.84
PTCHD3P1-201ENST00000612350 ASTLQ6HA08 431 aaPredicted RBP9.82□□□□□ -0.84
PTCHD3P1-201ENST00000612350 ZNF790Q6PG37 636 aa9.82□□□□□ -0.84
PTCHD3P1-201ENST00000612350 KRT26Q7Z3Y9 468 aa9.82□□□□□ -0.84
PTCHD3P1-201ENST00000612350 NPM2Q86SE8 214 aaKnown RBP9.82□□□□□ -0.84
PTCHD3P1-201ENST00000612350 KIF7Q2M1P5 1343 aa9.82□□□□□ -0.84
PTCHD3P1-201ENST00000612350 PITPNM2Q9BZ72 1349 aa9.82□□□□□ -0.84
PTCHD3P1-201ENST00000612350 ADM5C9JUS6 153 aa9.81□□□□□ -0.84
PTCHD3P1-201ENST00000612350 H7C1D1 291 aa9.81□□□□□ -0.84
PTCHD3P1-201ENST00000612350 EN2P19622 333 aaPredicted RBP9.81□□□□□ -0.84
PTCHD3P1-201ENST00000612350 PIP4K2AP48426 406 aaPredicted RBP9.81□□□□□ -0.84
PTCHD3P1-201ENST00000612350 MTHFSDQ2M296 383 aaKnown RBP9.81□□□□□ -0.84
PTCHD3P1-201ENST00000612350 SAMD7Q7Z3H4 446 aa9.81□□□□□ -0.84
PTCHD3P1-201ENST00000612350 MICALL2Q8IY33 904 aa9.81□□□□□ -0.84
PTCHD3P1-201ENST00000612350 RASEFQ8IZ41 740 aa9.81□□□□□ -0.84
PTCHD3P1-201ENST00000612350 KIF12Q96FN5 646 aa9.81□□□□□ -0.84
PTCHD3P1-201ENST00000612350 ZNF652Q9Y2D9 606 aa9.81□□□□□ -0.84
PTCHD3P1-201ENST00000612350 USP16Q9Y5T5 823 aa9.81□□□□□ -0.84
PTCHD3P1-201ENST00000612350 ABCC12Q96J65 1359 aa9.8□□□□□ -0.84
PTCHD3P1-201ENST00000612350 RAD17O75943 681 aa9.8□□□□□ -0.84
PTCHD3P1-201ENST00000612350 EGFRP00533 1210 aa9.8□□□□□ -0.84
PTCHD3P1-201ENST00000612350 TM4SF4P48230 202 aa9.8□□□□□ -0.84
PTCHD3P1-201ENST00000612350 TNIP1Q15025 636 aa9.8□□□□□ -0.84
PTCHD3P1-201ENST00000612350 CRAMP1Q96RY5 1269 aa9.8□□□□□ -0.84
PTCHD3P1-201ENST00000612350 RTFDC1Q9BY42 306 aaPredicted RBP9.8□□□□□ -0.84
PTCHD3P1-201ENST00000612350 R3HDMLQ9H3Y0 253 aa9.8□□□□□ -0.84
PTCHD3P1-201ENST00000612350 RIC1Q4ADV7 1423 aa9.8□□□□□ -0.84
PTCHD3P1-201ENST00000612350 SZT2Q5T011 3432 aa9.79□□□□□ -0.84
PTCHD3P1-201ENST00000612350 YDJCA8MPS7 323 aa9.79□□□□□ -0.84
PTCHD3P1-201ENST00000612350 H0YGN5 161 aa9.79□□□□□ -0.84
PTCHD3P1-201ENST00000612350 TCERG1O14776 1098 aaKnown RBP9.79□□□□□ -0.84
PTCHD3P1-201ENST00000612350 PPEF1O14829 653 aaPredicted RBP9.79□□□□□ -0.84
PTCHD3P1-201ENST00000612350 ATMINO43313 823 aaPredicted RBP9.79□□□□□ -0.84
PTCHD3P1-201ENST00000612350 FKTNO75072 461 aa9.79□□□□□ -0.84
PTCHD3P1-201ENST00000612350 GTF2E1P29083 439 aaPredicted RBP9.79□□□□□ -0.84
PTCHD3P1-201ENST00000612350 HLFQ16534 295 aa9.79□□□□□ -0.84
PTCHD3P1-201ENST00000612350 NUTM1Q86Y26 1132 aa9.79□□□□□ -0.84
PTCHD3P1-201ENST00000612350 DPF2Q92785 391 aa9.79□□□□□ -0.84
PTCHD3P1-201ENST00000612350 FMNL2Q96PY5 1086 aa9.79□□□□□ -0.84
PTCHD3P1-201ENST00000612350 CFHR5Q9BXR6 569 aa9.79□□□□□ -0.84
PTCHD3P1-201ENST00000612350 TIMELESSQ9UNS1 1208 aa9.79□□□□□ -0.84
PTCHD3P1-201ENST00000612350 CEP290O15078 2479 aa9.79□□□□□ -0.84
PTCHD3P1-201ENST00000612350 MKI67P46013 3256 aaKnown RBP9.78□□□□□ -0.84
PTCHD3P1-201ENST00000612350 KCNQ3O43525 872 aa9.78□□□□□ -0.84
PTCHD3P1-201ENST00000612350 KIAA2012Q0VF49 1180 aa9.78□□□□□ -0.84
PTCHD3P1-201ENST00000612350 TBC1D10BQ4KMP7 808 aaPredicted RBP9.78□□□□□ -0.84
PTCHD3P1-201ENST00000612350 IL17REQ8NFR9 667 aa9.78□□□□□ -0.84
PTCHD3P1-201ENST00000612350 RPGRQ92834 1020 aaKnown RBP9.78□□□□□ -0.84
PTCHD3P1-201ENST00000612350 DCPSQ96C86 337 aaKnown RBP9.78□□□□□ -0.84
PTCHD3P1-201ENST00000612350 RBM17Q96I25 401 aaKnown RBP9.78□□□□□ -0.84
PTCHD3P1-201ENST00000612350 ATP6V0A2Q9Y487 856 aa9.78□□□□□ -0.84
PTCHD3P1-201ENST00000612350 SIPA1L3O60292 1781 aaPredicted RBP9.78□□□□□ -0.84
PTCHD3P1-201ENST00000612350 PRAMEF22A3QJZ6 481 aa9.77□□□□□ -0.85
PTCHD3P1-201ENST00000612350 NBPF26B4DH59 902 aa9.77□□□□□ -0.85
PTCHD3P1-201ENST00000612350 C7P10643 843 aa9.77□□□□□ -0.85
PTCHD3P1-201ENST00000612350 NBPF10Q6P3W6 841 aaKnown RBP9.77□□□□□ -0.85
PTCHD3P1-201ENST00000612350 SUPT20HQ8NEM7 779 aa9.77□□□□□ -0.85
PTCHD3P1-201ENST00000612350 SLC39A7Q92504 469 aa9.77□□□□□ -0.85
PTCHD3P1-201ENST00000612350 CDCA5Q96FF9 252 aa9.77□□□□□ -0.85
PTCHD3P1-201ENST00000612350 RBM27Q9P2N5 1060 aaKnown RBP9.77□□□□□ -0.85
PTCHD3P1-201ENST00000612350 FKBP1BP68106 108 aa9.76□□□□□ -0.85
PTCHD3P1-201ENST00000612350 C3orf67Q6ZVT6 689 aa9.76□□□□□ -0.85
PTCHD3P1-201ENST00000612350 OTOP1Q7RTM1 612 aa9.76□□□□□ -0.85
PTCHD3P1-201ENST00000612350 CCER1Q8TC90 406 aaPredicted RBP9.76□□□□□ -0.85
PTCHD3P1-201ENST00000612350 ARMC5Q96C12 935 aa9.76□□□□□ -0.85
PTCHD3P1-201ENST00000612350 TRIM17Q9Y577 477 aa9.76□□□□□ -0.85
PTCHD3P1-201ENST00000612350 HMOX1P09601 288 aa9.75□□□□□ -0.85
PTCHD3P1-201ENST00000612350 RBM26Q5T8P6 1007 aaKnown RBP9.75□□□□□ -0.85
PTCHD3P1-201ENST00000612350 MOB2Q70IA6 237 aa9.75□□□□□ -0.85
PTCHD3P1-201ENST00000612350 NYXQ9GZU5 481 aa9.75□□□□□ -0.85
PTCHD3P1-201ENST00000612350 PRO3102Q9H379 93 aa9.75□□□□□ -0.85
PTCHD3P1-201ENST00000612350 ASTN2O75129 1339 aaPredicted RBP9.75□□□□□ -0.85
PTCHD3P1-201ENST00000612350 PSMD14O00487 310 aa9.74□□□□□ -0.85
PTCHD3P1-201ENST00000612350 MAP3K13O43283 966 aa9.74□□□□□ -0.85
PTCHD3P1-201ENST00000612350 TEFQ10587 303 aa9.74□□□□□ -0.85
PTCHD3P1-201ENST00000612350 SULF1Q8IWU6 871 aa9.74□□□□□ -0.85
PTCHD3P1-201ENST00000612350 METRNQ9UJH8 293 aa9.74□□□□□ -0.85
PTCHD3P1-201ENST00000612350 FBXO3Q9UK99 471 aa9.74□□□□□ -0.85
PTCHD3P1-201ENST00000612350 PTPN22Q9Y2R2 807 aa9.74□□□□□ -0.85
PTCHD3P1-201ENST00000612350 UBE2Q2LH0YL09 131 aa9.73□□□□□ -0.85
PTCHD3P1-201ENST00000612350 POTEB2H3BUK9 544 aa9.73□□□□□ -0.85
PTCHD3P1-201ENST00000612350 NUBP1P53384 320 aa9.73□□□□□ -0.85
PTCHD3P1-201ENST00000612350 SUSD4Q5VX71 490 aa9.73□□□□□ -0.85
PTCHD3P1-201ENST00000612350 DPP8Q6V1X1 898 aaPredicted RBP9.73□□□□□ -0.85
PTCHD3P1-201ENST00000612350 SP8Q8IXZ3 490 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms