RNA–Protein interactions for RNA: ENST00000611917.1

FAM228B-207, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 3

Gene FAM228B, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-207ENST00000611917 DIEXFQ68CQ4 756 aaKnown RBP15.89■□□□□ 0.13
FAM228B-207ENST00000611917 DNAAF4Q8WXU2 420 aa15.89■□□□□ 0.13
FAM228B-207ENST00000611917 FZD9O00144 591 aa15.88■□□□□ 0.13
FAM228B-207ENST00000611917 IGKV5-2P06315 115 aa15.88■□□□□ 0.13
FAM228B-207ENST00000611917 NIM1KQ8IY84 436 aa15.88■□□□□ 0.13
FAM228B-207ENST00000611917 SMC1BQ8NDV3 1235 aa15.88■□□□□ 0.13
FAM228B-207ENST00000611917 LINS1Q8NG48 757 aa15.88■□□□□ 0.13
FAM228B-207ENST00000611917 RTFDC1Q9BY42 306 aaPredicted RBP15.88■□□□□ 0.13
FAM228B-207ENST00000611917 NSFL1CQ9UNZ2 370 aaKnown RBP15.88■□□□□ 0.13
FAM228B-207ENST00000611917 DLEC1Q9Y238 1755 aa15.87■□□□□ 0.13
FAM228B-207ENST00000611917 NEURL1BA8MQ27 555 aa15.87■□□□□ 0.13
FAM228B-207ENST00000611917 H7C1W4 665 aa15.87■□□□□ 0.13
FAM228B-207ENST00000611917 PPIP5K2O43314 1243 aa15.87■□□□□ 0.13
FAM228B-207ENST00000611917 JARID2Q92833 1246 aaPredicted RBP15.87■□□□□ 0.13
FAM228B-207ENST00000611917 CDHR2Q9BYE9 1310 aa15.87■□□□□ 0.13
FAM228B-207ENST00000611917 APLP1P51693 650 aa15.86■□□□□ 0.13
FAM228B-207ENST00000611917 SLFN5Q08AF3 891 aa15.86■□□□□ 0.13
FAM228B-207ENST00000611917 CWF19L2Q2TBE0 894 aaKnown RBP15.86■□□□□ 0.13
FAM228B-207ENST00000611917 GPC2Q8N158 579 aa15.86■□□□□ 0.13
FAM228B-207ENST00000611917 CELF1Q92879 486 aaKnown RBP15.86■□□□□ 0.13
FAM228B-207ENST00000611917 ZNF521Q96K83 1311 aa15.86■□□□□ 0.13
FAM228B-207ENST00000611917 POTECB2RU33 542 aa15.85■□□□□ 0.13
FAM228B-207ENST00000611917 C6orf229H3BNL8 230 aa15.85■□□□□ 0.13
FAM228B-207ENST00000611917 GCKRQ14397 625 aa15.85■□□□□ 0.13
FAM228B-207ENST00000611917 ANKRD18AQ8IVF6 992 aa15.85■□□□□ 0.13
FAM228B-207ENST00000611917 CDC5LQ99459 802 aaKnown RBP15.85■□□□□ 0.13
FAM228B-207ENST00000611917 EYA3Q99504 573 aa15.85■□□□□ 0.13
FAM228B-207ENST00000611917 HACL1Q9UJ83 578 aa15.85■□□□□ 0.13
FAM228B-207ENST00000611917 ZNRF3Q9ULT6 936 aa15.85■□□□□ 0.13
FAM228B-207ENST00000611917 WASHC4Q2M389 1173 aa15.84■□□□□ 0.13
FAM228B-207ENST00000611917 PNMA8AQ86V59 439 aaPredicted RBP15.84■□□□□ 0.13
FAM228B-207ENST00000611917 L3MBTL3Q96JM7 780 aaPredicted RBP15.84■□□□□ 0.13
FAM228B-207ENST00000611917 ZC3H12CQ9C0D7 883 aaKnown RBP15.84■□□□□ 0.13
FAM228B-207ENST00000611917 ANKIB1Q9P2G1 1089 aa15.84■□□□□ 0.13
FAM228B-207ENST00000611917 GJA3Q9Y6H8 435 aa15.84■□□□□ 0.13
FAM228B-207ENST00000611917 SBF1O95248 1867 aa15.84■□□□□ 0.13
FAM228B-207ENST00000611917 G3V3G9 751 aa15.83■□□□□ 0.12
FAM228B-207ENST00000611917 LMOD1P29536 600 aaPredicted RBP15.83■□□□□ 0.12
FAM228B-207ENST00000611917 KIAA2012Q0VF49 1180 aa15.83■□□□□ 0.12
FAM228B-207ENST00000611917 TNIP1Q15025 636 aa15.83■□□□□ 0.12
FAM228B-207ENST00000611917 AOC3Q16853 763 aa15.83■□□□□ 0.12
FAM228B-207ENST00000611917 DCAF8Q5TAQ9 597 aa15.83■□□□□ 0.12
FAM228B-207ENST00000611917 UBE3BQ7Z3V4 1068 aa15.83■□□□□ 0.12
FAM228B-207ENST00000611917 TTLL11Q8NHH1 800 aa15.83■□□□□ 0.12
FAM228B-207ENST00000611917 SEC31BQ9NQW1 1179 aa15.83■□□□□ 0.12
FAM228B-207ENST00000611917 COL11A2P13942 1736 aaPredicted RBP15.82■□□□□ 0.12
FAM228B-207ENST00000611917 CTSWP56202 376 aa15.82■□□□□ 0.12
FAM228B-207ENST00000611917 CCDC85AQ96PX6 553 aaPredicted RBP15.82■□□□□ 0.12
FAM228B-207ENST00000611917 C9orf78Q9NZ63 289 aaPredicted RBP15.82■□□□□ 0.12
FAM228B-207ENST00000611917 CLEC11AQ9Y240 323 aa15.82■□□□□ 0.12
FAM228B-207ENST00000611917 F6X3S4 739 aa15.81■□□□□ 0.12
FAM228B-207ENST00000611917 ALDH1L1O75891 902 aa15.81■□□□□ 0.12
FAM228B-207ENST00000611917 CT47B1P0C2W7 299 aaPredicted RBP15.81■□□□□ 0.12
FAM228B-207ENST00000611917 GPSM2P81274 684 aa15.81■□□□□ 0.12
FAM228B-207ENST00000611917 FER1L6Q2WGJ9 1857 aa15.81■□□□□ 0.12
FAM228B-207ENST00000611917 BEND3Q5T5X7 828 aa15.81■□□□□ 0.12
FAM228B-207ENST00000611917 CHADLQ6NUI6 762 aa15.81■□□□□ 0.12
FAM228B-207ENST00000611917 SLC4A10Q6U841 1118 aa15.81■□□□□ 0.12
FAM228B-207ENST00000611917 MIER1Q8N108 512 aa15.81■□□□□ 0.12
FAM228B-207ENST00000611917 PLA2G12BQ9BX93 195 aa15.81■□□□□ 0.12
FAM228B-207ENST00000611917 TAF1DQ9H5J8 278 aaPredicted RBP15.81■□□□□ 0.12
FAM228B-207ENST00000611917 RIMBP2O15034 1052 aa15.8■□□□□ 0.12
FAM228B-207ENST00000611917 EPHX2P34913 555 aa15.8■□□□□ 0.12
FAM228B-207ENST00000611917 IGHMBP2P38935 993 aaKnown RBP15.8■□□□□ 0.12
FAM228B-207ENST00000611917 ALDH1L2Q3SY69 923 aa15.8■□□□□ 0.12
FAM228B-207ENST00000611917 CIAPIN1Q6FI81 312 aa15.8■□□□□ 0.12
FAM228B-207ENST00000611917 MRPL50Q8N5N7 158 aaKnown RBP15.8■□□□□ 0.12
FAM228B-207ENST00000611917 SRCIN1Q9C0H9 1055 aa15.8■□□□□ 0.12
FAM228B-207ENST00000611917 BSDC1Q9NW68 430 aaPredicted RBP15.8■□□□□ 0.12
FAM228B-207ENST00000611917 PODXL2Q9NZ53 605 aa15.8■□□□□ 0.12
FAM228B-207ENST00000611917 GGA1Q9UJY5 639 aa15.8■□□□□ 0.12
FAM228B-207ENST00000611917 ZNF541Q9H0D2 1346 aa15.79■□□□□ 0.12
FAM228B-207ENST00000611917 CSF1RP07333 972 aa15.79■□□□□ 0.12
FAM228B-207ENST00000611917 ATP2B4P23634 1241 aa15.79■□□□□ 0.12
FAM228B-207ENST00000611917 CXCL9Q07325 125 aa15.79■□□□□ 0.12
FAM228B-207ENST00000611917 EAPPQ56P03 285 aaPredicted RBP15.79■□□□□ 0.12
FAM228B-207ENST00000611917 LDHDQ86WU2 507 aa15.79■□□□□ 0.12
FAM228B-207ENST00000611917 TRMT2AQ8IZ69 625 aaKnown RBP15.79■□□□□ 0.12
FAM228B-207ENST00000611917 TBC1D16Q8TBP0 767 aa15.79■□□□□ 0.12
FAM228B-207ENST00000611917 CDCA7LQ96GN5 454 aa15.79■□□□□ 0.12
FAM228B-207ENST00000611917 MPHOSPH8Q99549 860 aa15.79■□□□□ 0.12
FAM228B-207ENST00000611917 BCL2L13Q9BXK5 485 aa15.79■□□□□ 0.12
FAM228B-207ENST00000611917 POLLQ9UGP5 575 aa15.79■□□□□ 0.12
FAM228B-207ENST00000611917 GREM2Q9H772 168 aa15.78■□□□□ 0.12
FAM228B-207ENST00000611917 TNRC6CQ9HCJ0 1690 aaKnown RBP15.77■□□□□ 0.12
FAM228B-207ENST00000611917 PTPRCP08575 1304 aa15.77■□□□□ 0.12
FAM228B-207ENST00000611917 ANKRD18BA2A2Z9 1011 aa15.77■□□□□ 0.12
FAM228B-207ENST00000611917 SSH1Q8WYL5 1049 aa15.77■□□□□ 0.12
FAM228B-207ENST00000611917 ANKRD2Q9GZV1 360 aa15.77■□□□□ 0.12
FAM228B-207ENST00000611917 SNED1Q8TER0 1413 aa15.77■□□□□ 0.11
FAM228B-207ENST00000611917 XDHP47989 1333 aa15.76■□□□□ 0.11
FAM228B-207ENST00000611917 GRM8O00222 908 aa15.76■□□□□ 0.11
FAM228B-207ENST00000611917 RAD17O75943 681 aa15.76■□□□□ 0.11
FAM228B-207ENST00000611917 UFL1O94874 794 aa15.76■□□□□ 0.11
FAM228B-207ENST00000611917 ITGA6P23229 1130 aa15.76■□□□□ 0.11
FAM228B-207ENST00000611917 CASP7P55210 303 aa15.76■□□□□ 0.11
FAM228B-207ENST00000611917 IFIT5Q13325 482 aaKnown RBP15.76■□□□□ 0.11
FAM228B-207ENST00000611917 USP50Q70EL3 339 aaPredicted RBP15.76■□□□□ 0.11
FAM228B-207ENST00000611917 MINPP1Q9UNW1 487 aa15.76■□□□□ 0.11
FAM228B-207ENST00000611917 CHMP3Q9Y3E7 222 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms