RNA–Protein interactions for RNA: ENST00000611575.4

CLK4-214, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,206 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-214ENST00000611575 NPC1L1Q9UHC9 1359 aa9.63□□□□□ -0.87
CLK4-214ENST00000611575 DICER1Q9UPY3 1922 aaKnown RBP9.62□□□□□ -0.87
CLK4-214ENST00000611575 DDNO94850 711 aaPredicted RBP9.62□□□□□ -0.87
CLK4-214ENST00000611575 STARD3NLO95772 234 aa9.62□□□□□ -0.87
CLK4-214ENST00000611575 CANXP27824 592 aaKnown RBP9.62□□□□□ -0.87
CLK4-214ENST00000611575 PRPF40BQ6NWY9 871 aaKnown RBP9.62□□□□□ -0.87
CLK4-214ENST00000611575 TEX13AQ9BXU3 409 aaPredicted RBP9.62□□□□□ -0.87
CLK4-214ENST00000611575 TAOK3Q9H2K8 898 aa9.62□□□□□ -0.87
CLK4-214ENST00000611575 GTF3C3Q9Y5Q9 886 aa9.62□□□□□ -0.87
CLK4-214ENST00000611575 BCORQ6W2J9 1755 aa9.62□□□□□ -0.87
CLK4-214ENST00000611575 TRIM66O15016 1216 aa9.61□□□□□ -0.87
CLK4-214ENST00000611575 FOXN1O15353 648 aa9.61□□□□□ -0.87
CLK4-214ENST00000611575 HMOX1P09601 288 aa9.61□□□□□ -0.87
CLK4-214ENST00000611575 TRIM26Q12899 539 aaPredicted RBP9.61□□□□□ -0.87
CLK4-214ENST00000611575 LDHDQ86WU2 507 aa9.61□□□□□ -0.87
CLK4-214ENST00000611575 CNKSR1Q969H4 720 aa9.61□□□□□ -0.87
CLK4-214ENST00000611575 TAF1DQ9H5J8 278 aaPredicted RBP9.61□□□□□ -0.87
CLK4-214ENST00000611575 KNSTRNQ9Y448 316 aa9.61□□□□□ -0.87
CLK4-214ENST00000611575 SOGA3Q5TF21 947 aa9.6□□□□□ -0.87
CLK4-214ENST00000611575 CLEC4GQ6UXB4 293 aa9.6□□□□□ -0.87
CLK4-214ENST00000611575 MASTLQ96GX5 879 aa9.6□□□□□ -0.87
CLK4-214ENST00000611575 WBP1LQ9NX94 342 aa9.6□□□□□ -0.87
CLK4-214ENST00000611575 THSD7BQ9C0I4 1608 aa9.6□□□□□ -0.87
CLK4-214ENST00000611575 KIF7Q2M1P5 1343 aa9.59□□□□□ -0.87
CLK4-214ENST00000611575 SLX4Q8IY92 1834 aa9.59□□□□□ -0.87
CLK4-214ENST00000611575 IQCA1LA6NCM1 817 aa9.59□□□□□ -0.87
CLK4-214ENST00000611575 RASSF10A6NK89 507 aa9.59□□□□□ -0.87
CLK4-214ENST00000611575 DIAPH1O60610 1272 aaKnown RBP9.59□□□□□ -0.87
CLK4-214ENST00000611575 MAP2K5Q13163 448 aa9.59□□□□□ -0.87
CLK4-214ENST00000611575 HIC1Q14526 733 aa9.59□□□□□ -0.87
CLK4-214ENST00000611575 POTEEQ6S8J3 1075 aa9.59□□□□□ -0.87
CLK4-214ENST00000611575 BICDL1Q6ZP65 573 aa9.59□□□□□ -0.87
CLK4-214ENST00000611575 ANKRD13DQ6ZTN6 518 aa9.59□□□□□ -0.87
CLK4-214ENST00000611575 CNBD1Q8NA66 436 aa9.59□□□□□ -0.87
CLK4-214ENST00000611575 ZNF622Q969S3 477 aaKnown RBP eCLIP9.59□□□□□ -0.874e-6■□□□□ 8.1
CLK4-214ENST00000611575 MKRN1Q9UHC7 482 aaKnown RBP9.59□□□□□ -0.87
CLK4-214ENST00000611575 TBC1D2BQ9UPU7 963 aa9.59□□□□□ -0.87
CLK4-214ENST00000611575 SCN4AP35499 1836 aa9.59□□□□□ -0.88
CLK4-214ENST00000611575 ZNF541Q9H0D2 1346 aa9.58□□□□□ -0.88
CLK4-214ENST00000611575 GNAT3A8MTJ3 354 aa9.58□□□□□ -0.88
CLK4-214ENST00000611575 FZD9O00144 591 aa9.58□□□□□ -0.88
CLK4-214ENST00000611575 A1BGP04217 495 aa9.58□□□□□ -0.88
CLK4-214ENST00000611575 VEGFBP49765 207 aa9.58□□□□□ -0.88
CLK4-214ENST00000611575 TTC5Q8N0Z6 440 aa9.58□□□□□ -0.88
CLK4-214ENST00000611575 CCDC24Q8N4L8 307 aa9.58□□□□□ -0.88
CLK4-214ENST00000611575 FMNL2Q96PY5 1086 aa9.58□□□□□ -0.88
CLK4-214ENST00000611575 SETDB2Q96T68 719 aa9.58□□□□□ -0.88
CLK4-214ENST00000611575 POLR3GLQ9BT43 218 aa9.58□□□□□ -0.88
CLK4-214ENST00000611575 VIRMAQ69YN4 1812 aaKnown RBP9.58□□□□□ -0.88
CLK4-214ENST00000611575 TMEM88BA6NKF7 163 aa9.57□□□□□ -0.88
CLK4-214ENST00000611575 KCNQ3O43525 872 aa9.57□□□□□ -0.88
CLK4-214ENST00000611575 FKBP4Q02790 459 aaKnown RBP eCLIP9.57□□□□□ -0.88
CLK4-214ENST00000611575 PDE4DQ08499 809 aa9.57□□□□□ -0.88
CLK4-214ENST00000611575 PTGDRQ13258 359 aa9.57□□□□□ -0.88
CLK4-214ENST00000611575 CRY2Q49AN0 593 aa9.57□□□□□ -0.88
CLK4-214ENST00000611575 CCDC93Q567U6 631 aa9.57□□□□□ -0.88
CLK4-214ENST00000611575 GAS2L2Q8NHY3 880 aa9.57□□□□□ -0.88
CLK4-214ENST00000611575 USP16Q9Y5T5 823 aa9.57□□□□□ -0.88
CLK4-214ENST00000611575 COL4A5P29400 1685 aa9.57□□□□□ -0.88
CLK4-214ENST00000611575 RIC1Q4ADV7 1423 aa9.56□□□□□ -0.88
CLK4-214ENST00000611575 CCDC88AQ3V6T2 1871 aa9.56□□□□□ -0.88
CLK4-214ENST00000611575 NBPF26B4DH59 902 aa9.56□□□□□ -0.88
CLK4-214ENST00000611575 IRF6O14896 467 aa9.56□□□□□ -0.88
CLK4-214ENST00000611575 NPR1P16066 1061 aa9.56□□□□□ -0.88
CLK4-214ENST00000611575 CTCFP49711 727 aaPredicted RBP9.56□□□□□ -0.88
CLK4-214ENST00000611575 ST5P78524 1137 aa9.56□□□□□ -0.88
CLK4-214ENST00000611575 LSM11P83369 360 aaKnown RBP eCLIP9.56□□□□□ -0.88
CLK4-214ENST00000611575 NBPF10Q6P3W6 841 aaKnown RBP9.56□□□□□ -0.88
CLK4-214ENST00000611575 DZIP3Q86Y13 1208 aaKnown RBP9.56□□□□□ -0.88
CLK4-214ENST00000611575 NBPF15Q8N660 670 aa9.56□□□□□ -0.88
CLK4-214ENST00000611575 EPAS1Q99814 870 aa9.56□□□□□ -0.88
CLK4-214ENST00000611575 PRAMEF22A3QJZ6 481 aa9.55□□□□□ -0.88
CLK4-214ENST00000611575 HSPA8P11142 646 aaKnown RBP9.55□□□□□ -0.88
CLK4-214ENST00000611575 FECHP22830 423 aa9.55□□□□□ -0.88
CLK4-214ENST00000611575 TEFQ10587 303 aa9.55□□□□□ -0.88
CLK4-214ENST00000611575 CCDC102AQ96A19 550 aa9.55□□□□□ -0.88
CLK4-214ENST00000611575 RNF166Q96A37 237 aaPredicted RBP9.55□□□□□ -0.88
CLK4-214ENST00000611575 PHACTR3Q96KR7 559 aa9.55□□□□□ -0.88
CLK4-214ENST00000611575 PSMD1Q99460 953 aa9.55□□□□□ -0.88
CLK4-214ENST00000611575 RSPH6AQ9H0K4 717 aa9.55□□□□□ -0.88
CLK4-214ENST00000611575 PCDHGA10Q9Y5H3 936 aa9.55□□□□□ -0.88
CLK4-214ENST00000611575 LTBP1Q14766 1721 aa9.54□□□□□ -0.88
CLK4-214ENST00000611575 EPHX2P34913 555 aa9.54□□□□□ -0.88
CLK4-214ENST00000611575 RGS19P49795 217 aa9.54□□□□□ -0.88
CLK4-214ENST00000611575 OLFM4Q6UX06 510 aa9.54□□□□□ -0.88
CLK4-214ENST00000611575 PNMA8AQ86V59 439 aaPredicted RBP9.54□□□□□ -0.88
CLK4-214ENST00000611575 RTKN2Q8IZC4 609 aa9.54□□□□□ -0.88
CLK4-214ENST00000611575 GPC2Q8N158 579 aa9.54□□□□□ -0.88
CLK4-214ENST00000611575 ZNF277Q9NRM2 450 aaPredicted RBP9.54□□□□□ -0.88
CLK4-214ENST00000611575 HACL1Q9UJ83 578 aa9.54□□□□□ -0.88
CLK4-214ENST00000611575 IBTKQ9P2D0 1353 aaPredicted RBP9.53□□□□□ -0.88
CLK4-214ENST00000611575 HOXA10P31260 410 aaPredicted RBP9.53□□□□□ -0.88
CLK4-214ENST00000611575 CNTROBQ8N137 903 aa9.53□□□□□ -0.88
CLK4-214ENST00000611575 KDM4CQ9H3R0 1056 aa9.53□□□□□ -0.88
CLK4-214ENST00000611575 NPDC1Q9NQX5 325 aaPredicted RBP9.53□□□□□ -0.88
CLK4-214ENST00000611575 ABCC12Q96J65 1359 aa9.52□□□□□ -0.88
CLK4-214ENST00000611575 BTBD11A6QL63 1104 aa9.52□□□□□ -0.89
CLK4-214ENST00000611575 SNRPA1P09661 255 aaKnown RBP9.52□□□□□ -0.89
CLK4-214ENST00000611575 IARSP41252 1262 aaKnown RBP9.52□□□□□ -0.89
CLK4-214ENST00000611575 SCNN1DP51172 638 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms