RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 CFHR5Q9BXR6 569 aa9.22□□□□□ -0.93
CBWD1-219ENST00000611457 NEURL1BA8MQ27 555 aa9.21□□□□□ -0.93
CBWD1-219ENST00000611457 PTCD1O75127 700 aaKnown RBP9.21□□□□□ -0.93
CBWD1-219ENST00000611457 C8orf58Q8NAV2 365 aa9.21□□□□□ -0.93
CBWD1-219ENST00000611457 DPF2Q92785 391 aa9.21□□□□□ -0.93
CBWD1-219ENST00000611457 SALL1Q9NSC2 1324 aa9.21□□□□□ -0.93
CBWD1-219ENST00000611457 PTPRFP10586 1907 aa9.21□□□□□ -0.93
CBWD1-219ENST00000611457 POTECB2RU33 542 aa9.21□□□□□ -0.93
CBWD1-219ENST00000611457 CIAO1O76071 339 aa9.21□□□□□ -0.93
CBWD1-219ENST00000611457 IGKV5-2P06315 115 aa9.21□□□□□ -0.93
CBWD1-219ENST00000611457 KIAA2012Q0VF49 1180 aa9.21□□□□□ -0.93
CBWD1-219ENST00000611457 CCDC184Q52MB2 194 aa9.21□□□□□ -0.93
CBWD1-219ENST00000611457 HDGFL1Q5TGJ6 251 aa9.21□□□□□ -0.93
CBWD1-219ENST00000611457 TTLL7Q6ZT98 887 aa9.21□□□□□ -0.93
CBWD1-219ENST00000611457 NOM1Q5C9Z4 860 aaKnown RBP9.21□□□□□ -0.94
CBWD1-219ENST00000611457 GPC2Q8N158 579 aa9.21□□□□□ -0.94
CBWD1-219ENST00000611457 ZNF784Q8NCA9 323 aaPredicted RBP9.21□□□□□ -0.94
CBWD1-219ENST00000611457 CHPF2Q9P2E5 772 aa9.21□□□□□ -0.94
CBWD1-219ENST00000611457 SUGT1Q9Y2Z0 365 aa9.21□□□□□ -0.94
CBWD1-219ENST00000611457 MYO3BQ8WXR4 1341 aa9.21□□□□□ -0.94
CBWD1-219ENST00000611457 GOLGA2Q08379 1002 aa9.2□□□□□ -0.94
CBWD1-219ENST00000611457 AAMPQ13685 434 aa9.2□□□□□ -0.94
CBWD1-219ENST00000611457 DCTN1Q14203 1278 aa9.2□□□□□ -0.94
CBWD1-219ENST00000611457 PROSER3Q2NL68 480 aa9.2□□□□□ -0.94
CBWD1-219ENST00000611457 PRPF40BQ6NWY9 871 aaKnown RBP9.2□□□□□ -0.94
CBWD1-219ENST00000611457 XAGE3Q8WTP9 111 aa9.2□□□□□ -0.94
CBWD1-219ENST00000611457 BSDC1Q9NW68 430 aaPredicted RBP9.2□□□□□ -0.94
CBWD1-219ENST00000611457 HDAC5Q9UQL6 1122 aa9.2□□□□□ -0.94
CBWD1-219ENST00000611457 FAM205AQ6ZU69 1335 aa9.2□□□□□ -0.94
CBWD1-219ENST00000611457 TWISTNBQ3B726 338 aaPredicted RBP9.2□□□□□ -0.94
CBWD1-219ENST00000611457 CWC25Q9NXE8 425 aaPredicted RBP9.2□□□□□ -0.94
CBWD1-219ENST00000611457 LEMD3Q9Y2U8 911 aa9.2□□□□□ -0.94
CBWD1-219ENST00000611457 NAV1Q8NEY1 1877 aa9.19□□□□□ -0.94
CBWD1-219ENST00000611457 FOXO4P98177 505 aa9.19□□□□□ -0.94
CBWD1-219ENST00000611457 ZNF512BQ96KM6 892 aaPredicted RBP9.19□□□□□ -0.94
CBWD1-219ENST00000611457 GMLQ99445 158 aa9.19□□□□□ -0.94
CBWD1-219ENST00000611457 USP50Q70EL3 339 aaPredicted RBP9.19□□□□□ -0.94
CBWD1-219ENST00000611457 REM2Q8IYK8 340 aaPredicted RBP9.19□□□□□ -0.94
CBWD1-219ENST00000611457 NIP7Q9Y221 180 aaKnown RBP eCLIP9.19□□□□□ -0.94
CBWD1-219ENST00000611457 PPEF1O14829 653 aaPredicted RBP9.18□□□□□ -0.94
CBWD1-219ENST00000611457 GCKRQ14397 625 aa9.18□□□□□ -0.94
CBWD1-219ENST00000611457 ERFEQ4G0M1 354 aa9.18□□□□□ -0.94
CBWD1-219ENST00000611457 NBPF5PQ86XG9 351 aaPredicted RBP9.18□□□□□ -0.94
CBWD1-219ENST00000611457 RBM19Q9Y4C8 960 aaKnown RBP9.18□□□□□ -0.94
CBWD1-219ENST00000611457 NPM3O75607 178 aaKnown RBP9.18□□□□□ -0.94
CBWD1-219ENST00000611457 IARSP41252 1262 aaKnown RBP9.18□□□□□ -0.94
CBWD1-219ENST00000611457 COPS6Q7L5N1 327 aa9.18□□□□□ -0.94
CBWD1-219ENST00000611457 ZNF804BA4D1E1 1349 aa9.18□□□□□ -0.94
CBWD1-219ENST00000611457 NEFLP07196 543 aa9.18□□□□□ -0.94
CBWD1-219ENST00000611457 IL1R1P14778 569 aa9.18□□□□□ -0.94
CBWD1-219ENST00000611457 GPR108Q9NPR9 543 aa9.18□□□□□ -0.94
CBWD1-219ENST00000611457 ATP2B4P23634 1241 aa9.17□□□□□ -0.94
CBWD1-219ENST00000611457 CTSWP56202 376 aa9.17□□□□□ -0.94
CBWD1-219ENST00000611457 KCNQ4P56696 695 aa9.17□□□□□ -0.94
CBWD1-219ENST00000611457 VGLL2Q8N8G2 317 aa9.17□□□□□ -0.94
CBWD1-219ENST00000611457 AGBL3Q8NEM8 1001 aa9.17□□□□□ -0.94
CBWD1-219ENST00000611457 CDC5LQ99459 802 aaKnown RBP9.17□□□□□ -0.94
CBWD1-219ENST00000611457 POLR3GLQ9BT43 218 aa9.17□□□□□ -0.94
CBWD1-219ENST00000611457 TAOK3Q9H2K8 898 aa9.17□□□□□ -0.94
CBWD1-219ENST00000611457 CANXP27824 592 aaKnown RBP9.17□□□□□ -0.94
CBWD1-219ENST00000611457 HDLBPQ00341 1268 aaKnown RBP9.17□□□□□ -0.94
CBWD1-219ENST00000611457 FLIIQ13045 1269 aa9.17□□□□□ -0.94
CBWD1-219ENST00000611457 ANKRD2Q9GZV1 360 aa9.17□□□□□ -0.94
CBWD1-219ENST00000611457 MRS2Q9HD23 443 aa9.17□□□□□ -0.94
CBWD1-219ENST00000611457 PPP2R3BQ9Y5P8 575 aa9.17□□□□□ -0.94
CBWD1-219ENST00000611457 VIL1P09327 827 aaKnown RBP9.16□□□□□ -0.94
CBWD1-219ENST00000611457 CAPN2P17655 700 aa9.16□□□□□ -0.94
CBWD1-219ENST00000611457 DNAAF4Q8WXU2 420 aa9.16□□□□□ -0.94
CBWD1-219ENST00000611457 NLRP3Q96P20 1036 aa9.16□□□□□ -0.94
CBWD1-219ENST00000611457 TOMM70O94826 608 aa9.16□□□□□ -0.94
CBWD1-219ENST00000611457 PHF14O94880 888 aa9.16□□□□□ -0.94
CBWD1-219ENST00000611457 CCT4P50991 539 aaKnown RBP9.16□□□□□ -0.94
CBWD1-219ENST00000611457 MGAMO43451 1857 aa9.16□□□□□ -0.94
CBWD1-219ENST00000611457 IQCA1LA6NCM1 817 aa9.16□□□□□ -0.94
CBWD1-219ENST00000611457 YY1P25490 414 aa9.16□□□□□ -0.94
CBWD1-219ENST00000611457 CCDC152Q4G0S7 254 aa9.16□□□□□ -0.94
CBWD1-219ENST00000611457 XDHP47989 1333 aa9.15□□□□□ -0.94
CBWD1-219ENST00000611457 SEMA3EO15041 775 aa9.15□□□□□ -0.94
CBWD1-219ENST00000611457 RFX5P48382 616 aaPredicted RBP9.15□□□□□ -0.94
CBWD1-219ENST00000611457 APLP1P51693 650 aa9.15□□□□□ -0.94
CBWD1-219ENST00000611457 LDHDQ86WU2 507 aa9.15□□□□□ -0.94
CBWD1-219ENST00000611457 CASP8AP2Q9UKL3 1982 aa9.15□□□□□ -0.94
CBWD1-219ENST00000611457 MAP3K11Q16584 847 aa9.15□□□□□ -0.94
CBWD1-219ENST00000611457 TTLL11Q8NHH1 800 aa9.15□□□□□ -0.94
CBWD1-219ENST00000611457 EYA3Q99504 573 aa9.15□□□□□ -0.94
CBWD1-219ENST00000611457 FGFR2P21802 821 aa9.15□□□□□ -0.95
CBWD1-219ENST00000611457 MROH5Q6ZUA9 1318 aa9.14□□□□□ -0.95
CBWD1-219ENST00000611457 C1QTNF8P60827 252 aa9.14□□□□□ -0.95
CBWD1-219ENST00000611457 FKBP1BP68106 108 aa9.14□□□□□ -0.95
CBWD1-219ENST00000611457 PNMA8AQ86V59 439 aaPredicted RBP9.14□□□□□ -0.95
CBWD1-219ENST00000611457 THUMPD2Q9BTF0 503 aaKnown RBP9.14□□□□□ -0.95
CBWD1-219ENST00000611457 API5Q9BZZ5 524 aaKnown RBP9.14□□□□□ -0.95
CBWD1-219ENST00000611457 A0A0G2JLW4 131 aa9.14□□□□□ -0.95
CBWD1-219ENST00000611457 PLEKHG5O94827 1062 aa9.14□□□□□ -0.95
CBWD1-219ENST00000611457 FKBP1CQ5VVH2 108 aa9.14□□□□□ -0.95
CBWD1-219ENST00000611457 TSPYL6Q8N831 410 aa9.14□□□□□ -0.95
CBWD1-219ENST00000611457 SMC1BQ8NDV3 1235 aa9.14□□□□□ -0.95
CBWD1-219ENST00000611457 TBC1D2BQ9UPU7 963 aa9.14□□□□□ -0.95
CBWD1-219ENST00000611457 MYH2Q9UKX2 1941 aa9.14□□□□□ -0.95
CBWD1-219ENST00000611457 MSL1Q68DK7 614 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms