RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 RIC3Q7Z5B4 369 aa28.07■■■□□ 2.08
CBWD3-207ENST00000611426 GOLGA2Q08379 1002 aa28.06■■■□□ 2.08
CBWD3-207ENST00000611426 MPNDQ8N594 471 aa28.06■■■□□ 2.08
CBWD3-207ENST00000611426 PHAXQ9H814 394 aaKnown RBP28.06■■■□□ 2.08
CBWD3-207ENST00000611426 LMOD1P29536 600 aaPredicted RBP28.05■■■□□ 2.08
CBWD3-207ENST00000611426 TRIM28Q13263 835 aaKnown RBP28.05■■■□□ 2.08
CBWD3-207ENST00000611426 C8orf58Q8NAV2 365 aa28.05■■■□□ 2.08
CBWD3-207ENST00000611426 RTFDC1Q9BY42 306 aaPredicted RBP28.05■■■□□ 2.08
CBWD3-207ENST00000611426 PASKQ96RG2 1323 aa28.04■■■□□ 2.08
CBWD3-207ENST00000611426 RTL5Q5HYW3 569 aaPredicted RBP28.04■■■□□ 2.08
CBWD3-207ENST00000611426 ITGBL1O95965 494 aaPredicted RBP28.03■■■□□ 2.08
CBWD3-207ENST00000611426 TMC4Q7Z404 712 aa28.03■■■□□ 2.08
CBWD3-207ENST00000611426 CHMP4AQ9BY43 222 aa28.03■■■□□ 2.08
CBWD3-207ENST00000611426 TAF1P21675 1872 aa28.03■■■□□ 2.08
CBWD3-207ENST00000611426 DDX60Q8IY21 1712 aaKnown RBP28.02■■■□□ 2.08
CBWD3-207ENST00000611426 SF3B3Q15393 1217 aaKnown RBP28.01■■■□□ 2.07
CBWD3-207ENST00000611426 ZNRF3Q9ULT6 936 aa28.01■■■□□ 2.07
CBWD3-207ENST00000611426 IRS4O14654 1257 aaPredicted RBP28■■■□□ 2.07
CBWD3-207ENST00000611426 SCNN1DP51172 638 aa28■■■□□ 2.07
CBWD3-207ENST00000611426 CCDC30Q5VVM6 783 aa28■■■□□ 2.07
CBWD3-207ENST00000611426 MAP1SQ66K74 1059 aaPredicted RBP28■■■□□ 2.07
CBWD3-207ENST00000611426 CNTROBQ8N137 903 aa28■■■□□ 2.07
CBWD3-207ENST00000611426 MKRN1Q9UHC7 482 aaKnown RBP28■■■□□ 2.07
CBWD3-207ENST00000611426 ADAMTSL1Q8N6G6 1762 aa28■■■□□ 2.07
CBWD3-207ENST00000611426 EPS15P42566 896 aa27.99■■■□□ 2.07
CBWD3-207ENST00000611426 KIAA2012Q0VF49 1180 aa27.99■■■□□ 2.07
CBWD3-207ENST00000611426 MYD88Q99836 296 aa27.99■■■□□ 2.07
CBWD3-207ENST00000611426 TMEM88BA6NKF7 163 aa27.98■■■□□ 2.07
CBWD3-207ENST00000611426 CXCL9Q07325 125 aa27.98■■■□□ 2.07
CBWD3-207ENST00000611426 CCDC27Q2M243 656 aa27.98■■■□□ 2.07
CBWD3-207ENST00000611426 TSPYL6Q8N831 410 aa27.98■■■□□ 2.07
CBWD3-207ENST00000611426 ZBTB38Q8NAP3 1195 aaPredicted RBP27.98■■■□□ 2.07
CBWD3-207ENST00000611426 CELF1Q92879 486 aaKnown RBP27.98■■■□□ 2.07
CBWD3-207ENST00000611426 TSR2Q969E8 191 aaKnown RBP27.98■■■□□ 2.07
CBWD3-207ENST00000611426 LTBP1Q14766 1721 aa27.97■■■□□ 2.07
CBWD3-207ENST00000611426 DDX58O95786 925 aaKnown RBP27.97■■■□□ 2.07
CBWD3-207ENST00000611426 WWC1Q8IX03 1113 aa27.96■■■□□ 2.07
CBWD3-207ENST00000611426 HSP90B1P14625 803 aaKnown RBP27.95■■■□□ 2.06
CBWD3-207ENST00000611426 USP50Q70EL3 339 aaPredicted RBP27.95■■■□□ 2.06
CBWD3-207ENST00000611426 CCDC191Q8NCU4 936 aa27.95■■■□□ 2.06
CBWD3-207ENST00000611426 NSFL1CQ9UNZ2 370 aaKnown RBP27.95■■■□□ 2.06
CBWD3-207ENST00000611426 HSPA1AP0DMV8 641 aaKnown RBP27.94■■■□□ 2.06
CBWD3-207ENST00000611426 HSPA1BP0DMV9 641 aaKnown RBP27.94■■■□□ 2.06
CBWD3-207ENST00000611426 CIAPIN1Q6FI81 312 aa27.94■■■□□ 2.06
CBWD3-207ENST00000611426 GPRC5DQ9NZD1 345 aa27.94■■■□□ 2.06
CBWD3-207ENST00000611426 TNIP1Q15025 636 aa27.93■■■□□ 2.06
CBWD3-207ENST00000611426 METTL22Q9BUU2 404 aaPredicted RBP27.93■■■□□ 2.06
CBWD3-207ENST00000611426 CWC25Q9NXE8 425 aaPredicted RBP27.93■■■□□ 2.06
CBWD3-207ENST00000611426 RAD17O75943 681 aa27.92■■■□□ 2.06
CBWD3-207ENST00000611426 RPS8P62241 208 aaKnown RBP27.92■■■□□ 2.06
CBWD3-207ENST00000611426 STK31Q9BXU1 1019 aa27.92■■■□□ 2.06
CBWD3-207ENST00000611426 ADARB2Q9NS39 739 aaKnown RBP27.92■■■□□ 2.06
CBWD3-207ENST00000611426 CNTNAP1P78357 1384 aa27.92■■■□□ 2.06
CBWD3-207ENST00000611426 LRRC37AA6NMS7 1700 aa27.92■■■□□ 2.06
CBWD3-207ENST00000611426 PCCAP05165 728 aaPredicted RBP27.91■■■□□ 2.06
CBWD3-207ENST00000611426 GMPSP49915 693 aaPredicted RBP27.91■■■□□ 2.06
CBWD3-207ENST00000611426 WASHC4Q2M389 1173 aa27.91■■■□□ 2.06
CBWD3-207ENST00000611426 COL13A1Q5TAT6 717 aaPredicted RBP27.91■■■□□ 2.06
CBWD3-207ENST00000611426 FAM9BQ8IZU0 186 aa27.91■■■□□ 2.06
CBWD3-207ENST00000611426 MAP3K2Q9Y2U5 619 aa27.91■■■□□ 2.06
CBWD3-207ENST00000611426 C6orf229H3BNL8 230 aa27.9■■■□□ 2.06
CBWD3-207ENST00000611426 GPSM2P81274 684 aa27.9■■■□□ 2.06
CBWD3-207ENST00000611426 JARID2Q92833 1246 aaPredicted RBP27.9■■■□□ 2.06
CBWD3-207ENST00000611426 BCL2L13Q9BXK5 485 aa27.9■■■□□ 2.06
CBWD3-207ENST00000611426 DUOX1Q9NRD9 1551 aa27.89■■■□□ 2.06
CBWD3-207ENST00000611426 TWISTNBQ3B726 338 aaPredicted RBP27.89■■■□□ 2.06
CBWD3-207ENST00000611426 KSR2Q6VAB6 950 aa27.89■■■□□ 2.06
CBWD3-207ENST00000611426 IL16Q14005 1332 aa27.88■■■□□ 2.05
CBWD3-207ENST00000611426 PDE8AO60658 829 aa27.88■■■□□ 2.05
CBWD3-207ENST00000611426 NCBP3Q53F19 620 aaKnown RBP27.88■■■□□ 2.05
CBWD3-207ENST00000611426 SEC31BQ9NQW1 1179 aa27.88■■■□□ 2.05
CBWD3-207ENST00000611426 POLLQ9UGP5 575 aa27.88■■■□□ 2.05
CBWD3-207ENST00000611426 PI4KAP2A4QPH2 592 aa27.87■■■□□ 2.05
CBWD3-207ENST00000611426 YDJCA8MPS7 323 aa27.87■■■□□ 2.05
CBWD3-207ENST00000611426 RIMBP2O15034 1052 aa27.87■■■□□ 2.05
CBWD3-207ENST00000611426 CCDC152Q4G0S7 254 aa27.87■■■□□ 2.05
CBWD3-207ENST00000611426 PI4KAP1Q8N8J0 262 aa27.87■■■□□ 2.05
CBWD3-207ENST00000611426 COL4A1P02462 1669 aa27.87■■■□□ 2.05
CBWD3-207ENST00000611426 VEGFBP49765 207 aa27.86■■■□□ 2.05
CBWD3-207ENST00000611426 EYA3Q99504 573 aa27.86■■■□□ 2.05
CBWD3-207ENST00000611426 CDHR2Q9BYE9 1310 aa27.86■■■□□ 2.05
CBWD3-207ENST00000611426 ABT1Q9ULW3 272 aaKnown RBP27.86■■■□□ 2.05
CBWD3-207ENST00000611426 SALL2Q9Y467 1007 aaPredicted RBP27.86■■■□□ 2.05
CBWD3-207ENST00000611426 SLC4A2P04920 1241 aa27.85■■■□□ 2.05
CBWD3-207ENST00000611426 NEXNQ0ZGT2 675 aa27.85■■■□□ 2.05
CBWD3-207ENST00000611426 DEFB115Q30KQ5 88 aa27.85■■■□□ 2.05
CBWD3-207ENST00000611426 TBC1D16Q8TBP0 767 aa27.85■■■□□ 2.05
CBWD3-207ENST00000611426 CCDC85AQ96PX6 553 aaPredicted RBP27.85■■■□□ 2.05
CBWD3-207ENST00000611426 DBNDD1Q9H9R9 158 aa27.85■■■□□ 2.05
CBWD3-207ENST00000611426 HNRNPUQ00839 825 aaKnown RBP eCLIP27.84■■■□□ 2.05
CBWD3-207ENST00000611426 CNOT7Q9UIV1 285 aaKnown RBP27.84■■■□□ 2.05
CBWD3-207ENST00000611426 ZBED9Q6R2W3 1325 aa27.83■■■□□ 2.05
CBWD3-207ENST00000611426 RASSF10A6NK89 507 aa27.83■■■□□ 2.05
CBWD3-207ENST00000611426 IGKV5-2P06315 115 aa27.83■■■□□ 2.05
CBWD3-207ENST00000611426 FMR1Q06787 632 aaKnown RBP eCLIP27.83■■■□□ 2.05
CBWD3-207ENST00000611426 G2E3Q7L622 706 aa27.83■■■□□ 2.05
CBWD3-207ENST00000611426 ANKIB1Q9P2G1 1089 aa27.83■■■□□ 2.05
CBWD3-207ENST00000611426 TRAF5O00463 557 aa27.82■■■□□ 2.04
CBWD3-207ENST00000611426 DOK7Q18PE1 504 aa27.82■■■□□ 2.04
CBWD3-207ENST00000611426 GPR101Q96P66 508 aaPredicted RBP27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms