RNA–Protein interactions for RNA: ENST00000611107.1

SNCA-212, Transcript of synuclein alpha, humanhuman

TSL 5 BASIC

Gene SNCA, Length 297 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-212ENST00000611107 ATP6V0A2Q9Y487 856 aa11.13□□□□□ -0.63
SNCA-212ENST00000611107 SCN9AQ15858 1988 aa11.13□□□□□ -0.63
SNCA-212ENST00000611107 RNF123Q5XPI4 1314 aa11.12□□□□□ -0.63
SNCA-212ENST00000611107 NEURL1BA8MQ27 555 aa11.12□□□□□ -0.63
SNCA-212ENST00000611107 E9PSI1 815 aa11.12□□□□□ -0.63
SNCA-212ENST00000611107 PCCAP05165 728 aaPredicted RBP11.12□□□□□ -0.63
SNCA-212ENST00000611107 CASP7P55210 303 aa11.12□□□□□ -0.63
SNCA-212ENST00000611107 GRAPQ13588 217 aa11.12□□□□□ -0.63
SNCA-212ENST00000611107 AOC3Q16853 763 aa11.12□□□□□ -0.63
SNCA-212ENST00000611107 RTKN2Q8IZC4 609 aa11.12□□□□□ -0.63
SNCA-212ENST00000611107 CCDC191Q8NCU4 936 aa11.12□□□□□ -0.63
SNCA-212ENST00000611107 GRAPLQ8TC17 118 aaPredicted RBP11.12□□□□□ -0.63
SNCA-212ENST00000611107 PSMD1Q99460 953 aa11.12□□□□□ -0.63
SNCA-212ENST00000611107 MYH16Q9H6N6 1097 aa11.12□□□□□ -0.63
SNCA-212ENST00000611107 ZC3H4Q9UPT8 1303 aaKnown RBP11.11□□□□□ -0.63
SNCA-212ENST00000611107 CEP350Q5VT06 3117 aa11.11□□□□□ -0.63
SNCA-212ENST00000611107 FZD9O00144 591 aa11.11□□□□□ -0.63
SNCA-212ENST00000611107 TOMM70O94826 608 aa11.11□□□□□ -0.63
SNCA-212ENST00000611107 SOGA3Q5TF21 947 aa11.11□□□□□ -0.63
SNCA-212ENST00000611107 TRMT2AQ8IZ69 625 aaKnown RBP11.11□□□□□ -0.63
SNCA-212ENST00000611107 CWC25Q9NXE8 425 aaPredicted RBP11.11□□□□□ -0.63
SNCA-212ENST00000611107 ADAMTSL1Q8N6G6 1762 aa11.11□□□□□ -0.63
SNCA-212ENST00000611107 KDM2BQ8NHM5 1336 aa11.1□□□□□ -0.63
SNCA-212ENST00000611107 H7C1W4 665 aa11.1□□□□□ -0.63
SNCA-212ENST00000611107 HSPA6P17066 643 aa11.1□□□□□ -0.63
SNCA-212ENST00000611107 GPSM2P81274 684 aa11.1□□□□□ -0.63
SNCA-212ENST00000611107 DDX46Q7L014 1031 aaKnown RBP11.1□□□□□ -0.63
SNCA-212ENST00000611107 SP8Q8IXZ3 490 aa11.1□□□□□ -0.63
SNCA-212ENST00000611107 STK31Q9BXU1 1019 aa11.1□□□□□ -0.63
SNCA-212ENST00000611107 RTFDC1Q9BY42 306 aaPredicted RBP11.1□□□□□ -0.63
SNCA-212ENST00000611107 SCN4AP35499 1836 aa11.09□□□□□ -0.63
SNCA-212ENST00000611107 A0A1B0GUL6 1792 aa11.09□□□□□ -0.63
SNCA-212ENST00000611107 SHTN1A0MZ66 631 aa11.09□□□□□ -0.63
SNCA-212ENST00000611107 YDJCA8MPS7 323 aa11.09□□□□□ -0.63
SNCA-212ENST00000611107 BBOX1O75936 387 aa11.09□□□□□ -0.63
SNCA-212ENST00000611107 FKBP5Q13451 457 aaPredicted RBP11.09□□□□□ -0.63
SNCA-212ENST00000611107 EPHA10Q5JZY3 1008 aa11.09□□□□□ -0.63
SNCA-212ENST00000611107 UBE3BQ7Z3V4 1068 aa11.09□□□□□ -0.63
SNCA-212ENST00000611107 RBM46Q8TBY0 533 aaKnown RBP11.09□□□□□ -0.63
SNCA-212ENST00000611107 DNAAF4Q8WXU2 420 aa11.09□□□□□ -0.63
SNCA-212ENST00000611107 KCNQ5Q9NR82 932 aa11.09□□□□□ -0.63
SNCA-212ENST00000611107 POLLQ9UGP5 575 aa11.09□□□□□ -0.63
SNCA-212ENST00000611107 ZNF646O15015 1829 aaPredicted RBP11.08□□□□□ -0.64
SNCA-212ENST00000611107 PDE8AO60658 829 aa11.08□□□□□ -0.64
SNCA-212ENST00000611107 DDX58O95786 925 aaKnown RBP11.08□□□□□ -0.64
SNCA-212ENST00000611107 VEGFAP15692 232 aaPredicted RBP11.08□□□□□ -0.64
SNCA-212ENST00000611107 GCKRQ14397 625 aa11.08□□□□□ -0.64
SNCA-212ENST00000611107 BEND3Q5T5X7 828 aa11.08□□□□□ -0.64
SNCA-212ENST00000611107 MRPL50Q8N5N7 158 aaKnown RBP11.08□□□□□ -0.64
SNCA-212ENST00000611107 TTLL11Q8NHH1 800 aa11.08□□□□□ -0.64
SNCA-212ENST00000611107 BCL2L13Q9BXK5 485 aa11.08□□□□□ -0.64
SNCA-212ENST00000611107 GREM2Q9H772 168 aa11.08□□□□□ -0.64
SNCA-212ENST00000611107 CDHR2Q9BYE9 1310 aa11.08□□□□□ -0.64
SNCA-212ENST00000611107 PPIP5K2O43314 1243 aa11.07□□□□□ -0.64
SNCA-212ENST00000611107 CTSWP56202 376 aa11.07□□□□□ -0.64
SNCA-212ENST00000611107 RPS8P62241 208 aaKnown RBP11.07□□□□□ -0.64
SNCA-212ENST00000611107 FMR1Q06787 632 aaKnown RBP eCLIP11.07□□□□□ -0.64
SNCA-212ENST00000611107 CC2D2BQ6DHV5 1058 aa11.07□□□□□ -0.64
SNCA-212ENST00000611107 LARGE2Q8N3Y3 721 aa11.07□□□□□ -0.64
SNCA-212ENST00000611107 MPNDQ8N594 471 aa11.07□□□□□ -0.64
SNCA-212ENST00000611107 SSH1Q8WYL5 1049 aa11.07□□□□□ -0.64
SNCA-212ENST00000611107 L3MBTL3Q96JM7 780 aaPredicted RBP11.07□□□□□ -0.64
SNCA-212ENST00000611107 TAF1DQ9H5J8 278 aaPredicted RBP11.07□□□□□ -0.64
SNCA-212ENST00000611107 POLR2AP24928 1970 aaKnown RBP11.07□□□□□ -0.64
SNCA-212ENST00000611107 RIMBP2O15034 1052 aa11.06□□□□□ -0.64
SNCA-212ENST00000611107 EPS15P42566 896 aa11.06□□□□□ -0.64
SNCA-212ENST00000611107 SCNN1DP51172 638 aa11.06□□□□□ -0.64
SNCA-212ENST00000611107 FOXO4P98177 505 aa11.06□□□□□ -0.64
SNCA-212ENST00000611107 CXCL9Q07325 125 aa11.06□□□□□ -0.64
SNCA-212ENST00000611107 DPY19L2Q6NUT2 758 aa11.06□□□□□ -0.64
SNCA-212ENST00000611107 DPP8Q6V1X1 898 aaPredicted RBP11.06□□□□□ -0.64
SNCA-212ENST00000611107 DNAJC5GQ8N7S2 189 aa11.06□□□□□ -0.64
SNCA-212ENST00000611107 KAZALD1Q96I82 304 aa11.06□□□□□ -0.64
SNCA-212ENST00000611107 SNAP23O00161 211 aa11.05□□□□□ -0.64
SNCA-212ENST00000611107 KIAA2012Q0VF49 1180 aa11.05□□□□□ -0.64
SNCA-212ENST00000611107 DOK7Q18PE1 504 aa11.05□□□□□ -0.64
SNCA-212ENST00000611107 FAM161AQ3B820 660 aa11.05□□□□□ -0.64
SNCA-212ENST00000611107 LINS1Q8NG48 757 aa11.05□□□□□ -0.64
SNCA-212ENST00000611107 TBC1D16Q8TBP0 767 aa11.05□□□□□ -0.64
SNCA-212ENST00000611107 DBNDD1Q9H9R9 158 aa11.05□□□□□ -0.64
SNCA-212ENST00000611107 NSFL1CQ9UNZ2 370 aaKnown RBP11.05□□□□□ -0.64
SNCA-212ENST00000611107 GJA3Q9Y6H8 435 aa11.05□□□□□ -0.64
SNCA-212ENST00000611107 RTL9Q8NET4 1388 aa11.04□□□□□ -0.64
SNCA-212ENST00000611107 RAD17O75943 681 aa11.04□□□□□ -0.64
SNCA-212ENST00000611107 CSF1RP07333 972 aa11.04□□□□□ -0.64
SNCA-212ENST00000611107 KLRK1P26718 216 aa11.04□□□□□ -0.64
SNCA-212ENST00000611107 PLA2G12BQ9BX93 195 aa11.04□□□□□ -0.64
SNCA-212ENST00000611107 TNNQ9UQP3 1299 aa11.04□□□□□ -0.64
SNCA-212ENST00000611107 PSME4Q14997 1843 aa11.04□□□□□ -0.64
SNCA-212ENST00000611107 EPHX2P34913 555 aa11.03□□□□□ -0.64
SNCA-212ENST00000611107 NEXNQ0ZGT2 675 aa11.03□□□□□ -0.64
SNCA-212ENST00000611107 FSTL1Q12841 308 aa11.03□□□□□ -0.64
SNCA-212ENST00000611107 CCDC152Q4G0S7 254 aa11.03□□□□□ -0.64
SNCA-212ENST00000611107 TXNRD3Q86VQ6 643 aa11.03□□□□□ -0.64
SNCA-212ENST00000611107 NIM1KQ8IY84 436 aa11.03□□□□□ -0.64
SNCA-212ENST00000611107 C16orf71Q8IYS4 520 aaPredicted RBP11.03□□□□□ -0.64
SNCA-212ENST00000611107 SMC1BQ8NDV3 1235 aa11.03□□□□□ -0.64
SNCA-212ENST00000611107 JDP2Q8WYK2 163 aa11.03□□□□□ -0.64
SNCA-212ENST00000611107 YTHDC1Q96MU7 727 aaKnown RBP11.03□□□□□ -0.64
SNCA-212ENST00000611107 MINPP1Q9UNW1 487 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms