RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 ZBTB38Q8NAP3 1195 aaPredicted RBP14.79□□□□□ -0.04
LINC00539-204ENST00000608957 GRAPLQ8TC17 118 aaPredicted RBP14.79□□□□□ -0.04
LINC00539-204ENST00000608957 ADAMTSL1Q8N6G6 1762 aa14.78□□□□□ -0.04
LINC00539-204ENST00000608957 FZD9O00144 591 aa14.78□□□□□ -0.04
LINC00539-204ENST00000608957 SLC4A2P04920 1241 aa14.78□□□□□ -0.04
LINC00539-204ENST00000608957 VEGFAP15692 232 aaPredicted RBP14.78□□□□□ -0.04
LINC00539-204ENST00000608957 KSR2Q6VAB6 950 aa14.78□□□□□ -0.04
LINC00539-204ENST00000608957 DDX46Q7L014 1031 aaKnown RBP14.78□□□□□ -0.04
LINC00539-204ENST00000608957 C16orf71Q8IYS4 520 aaPredicted RBP14.78□□□□□ -0.04
LINC00539-204ENST00000608957 CCDC191Q8NCU4 936 aa14.78□□□□□ -0.04
LINC00539-204ENST00000608957 CELF1Q92879 486 aaKnown RBP14.78□□□□□ -0.04
LINC00539-204ENST00000608957 BBOX1O75936 387 aa14.77□□□□□ -0.05
LINC00539-204ENST00000608957 DDX58O95786 925 aaKnown RBP14.77□□□□□ -0.05
LINC00539-204ENST00000608957 PCCAP05165 728 aaPredicted RBP14.77□□□□□ -0.05
LINC00539-204ENST00000608957 POTEIP0CG38 1075 aa14.77□□□□□ -0.05
LINC00539-204ENST00000608957 POTEJP0CG39 1038 aa14.77□□□□□ -0.05
LINC00539-204ENST00000608957 SP8Q8IXZ3 490 aa14.77□□□□□ -0.05
LINC00539-204ENST00000608957 STK31Q9BXU1 1019 aa14.77□□□□□ -0.05
LINC00539-204ENST00000608957 FSTL1Q12841 308 aa14.76□□□□□ -0.05
LINC00539-204ENST00000608957 FLIIQ13045 1269 aa14.76□□□□□ -0.05
LINC00539-204ENST00000608957 CWF19L2Q2TBE0 894 aaKnown RBP14.76□□□□□ -0.05
LINC00539-204ENST00000608957 L3MBTL3Q96JM7 780 aaPredicted RBP14.76□□□□□ -0.05
LINC00539-204ENST00000608957 RTFDC1Q9BY42 306 aaPredicted RBP14.76□□□□□ -0.05
LINC00539-204ENST00000608957 CHMP4AQ9BY43 222 aa14.76□□□□□ -0.05
LINC00539-204ENST00000608957 CWC25Q9NXE8 425 aaPredicted RBP14.76□□□□□ -0.05
LINC00539-204ENST00000608957 AOC3Q16853 763 aa14.75□□□□□ -0.05
LINC00539-204ENST00000608957 GRIPAP1Q4V328 841 aa14.75□□□□□ -0.05
LINC00539-204ENST00000608957 CDCA7LQ96GN5 454 aa14.75□□□□□ -0.05
LINC00539-204ENST00000608957 SEC31BQ9NQW1 1179 aa14.75□□□□□ -0.05
LINC00539-204ENST00000608957 CEP350Q5VT06 3117 aa14.75□□□□□ -0.05
LINC00539-204ENST00000608957 SCN9AQ15858 1988 aa14.74□□□□□ -0.05
LINC00539-204ENST00000608957 NEURL1BA8MQ27 555 aa14.74□□□□□ -0.05
LINC00539-204ENST00000608957 HTRA3P83110 453 aa14.74□□□□□ -0.05
LINC00539-204ENST00000608957 LARGE2Q8N3Y3 721 aa14.74□□□□□ -0.05
LINC00539-204ENST00000608957 SMC1BQ8NDV3 1235 aa14.74□□□□□ -0.05
LINC00539-204ENST00000608957 CDHR2Q9BYE9 1310 aa14.73□□□□□ -0.05
LINC00539-204ENST00000608957 PPIP5K2O43314 1243 aa14.73□□□□□ -0.05
LINC00539-204ENST00000608957 PDE8AO60658 829 aa14.73□□□□□ -0.05
LINC00539-204ENST00000608957 MPNDQ8N594 471 aa14.73□□□□□ -0.05
LINC00539-204ENST00000608957 MYH16Q9H6N6 1097 aa14.73□□□□□ -0.05
LINC00539-204ENST00000608957 PSME4Q14997 1843 aa14.73□□□□□ -0.05
LINC00539-204ENST00000608957 A0A1B0GUL6 1792 aa14.73□□□□□ -0.05
LINC00539-204ENST00000608957 E9PSI1 815 aa14.72□□□□□ -0.05
LINC00539-204ENST00000608957 APLP1P51693 650 aa14.72□□□□□ -0.05
LINC00539-204ENST00000608957 SLFN5Q08AF3 891 aa14.72□□□□□ -0.05
LINC00539-204ENST00000608957 DPP8Q6V1X1 898 aaPredicted RBP14.72□□□□□ -0.05
LINC00539-204ENST00000608957 JDP2Q8WYK2 163 aa14.72□□□□□ -0.05
LINC00539-204ENST00000608957 CCDC85AQ96PX6 553 aaPredicted RBP14.72□□□□□ -0.05
LINC00539-204ENST00000608957 TAF1DQ9H5J8 278 aaPredicted RBP14.72□□□□□ -0.05
LINC00539-204ENST00000608957 F6X3S4 739 aa14.71□□□□□ -0.05
LINC00539-204ENST00000608957 H7C1W4 665 aa14.71□□□□□ -0.05
LINC00539-204ENST00000608957 CASP7P55210 303 aa14.71□□□□□ -0.05
LINC00539-204ENST00000608957 GPSM2P81274 684 aa14.71□□□□□ -0.05
LINC00539-204ENST00000608957 KIAA2012Q0VF49 1180 aa14.71□□□□□ -0.05
LINC00539-204ENST00000608957 FKBP5Q13451 457 aaPredicted RBP14.71□□□□□ -0.05
LINC00539-204ENST00000608957 TMC4Q7Z404 712 aa14.71□□□□□ -0.05
LINC00539-204ENST00000608957 GPC2Q8N158 579 aa14.71□□□□□ -0.05
LINC00539-204ENST00000608957 DNAJC5GQ8N7S2 189 aa14.71□□□□□ -0.05
LINC00539-204ENST00000608957 DNAAF4Q8WXU2 420 aa14.71□□□□□ -0.05
LINC00539-204ENST00000608957 ZNF646O15015 1829 aaPredicted RBP14.71□□□□□ -0.06
LINC00539-204ENST00000608957 CTSWP56202 376 aa14.7□□□□□ -0.06
LINC00539-204ENST00000608957 EIF6P56537 245 aaKnown RBP14.7□□□□□ -0.06
LINC00539-204ENST00000608957 RPS8P62241 208 aaKnown RBP14.7□□□□□ -0.06
LINC00539-204ENST00000608957 NEXNQ0ZGT2 675 aa14.7□□□□□ -0.06
LINC00539-204ENST00000608957 NIM1KQ8IY84 436 aa14.7□□□□□ -0.06
LINC00539-204ENST00000608957 TRMT2AQ8IZ69 625 aaKnown RBP14.7□□□□□ -0.06
LINC00539-204ENST00000608957 GPR101Q96P66 508 aaPredicted RBP14.7□□□□□ -0.06
LINC00539-204ENST00000608957 VPS33BQ9H267 617 aa14.7□□□□□ -0.06
LINC00539-204ENST00000608957 POLLQ9UGP5 575 aa14.7□□□□□ -0.06
LINC00539-204ENST00000608957 GJA3Q9Y6H8 435 aa14.7□□□□□ -0.06
LINC00539-204ENST00000608957 IQCA1LA6NCM1 817 aa14.69□□□□□ -0.06
LINC00539-204ENST00000608957 YDJCA8MPS7 323 aa14.69□□□□□ -0.06
LINC00539-204ENST00000608957 SCNN1DP51172 638 aa14.69□□□□□ -0.06
LINC00539-204ENST00000608957 GCKRQ14397 625 aa14.69□□□□□ -0.06
LINC00539-204ENST00000608957 CCDC152Q4G0S7 254 aa14.69□□□□□ -0.06
LINC00539-204ENST00000608957 UBE3BQ7Z3V4 1068 aa14.69□□□□□ -0.06
LINC00539-204ENST00000608957 SUPT20HQ8NEM7 779 aa14.69□□□□□ -0.06
LINC00539-204ENST00000608957 TTLL11Q8NHH1 800 aa14.69□□□□□ -0.06
LINC00539-204ENST00000608957 TMX4Q9H1E5 349 aaPredicted RBP14.69□□□□□ -0.06
LINC00539-204ENST00000608957 HACL1Q9UJ83 578 aa14.69□□□□□ -0.06
LINC00539-204ENST00000608957 POLR2AP24928 1970 aaKnown RBP14.69□□□□□ -0.06
LINC00539-204ENST00000608957 EPHX2P34913 555 aa14.68□□□□□ -0.06
LINC00539-204ENST00000608957 CXCL9Q07325 125 aa14.68□□□□□ -0.06
LINC00539-204ENST00000608957 BEND3Q5T5X7 828 aa14.68□□□□□ -0.06
LINC00539-204ENST00000608957 CHADLQ6NUI6 762 aa14.68□□□□□ -0.06
LINC00539-204ENST00000608957 LINS1Q8NG48 757 aa14.68□□□□□ -0.06
LINC00539-204ENST00000608957 GREM2Q9H772 168 aa14.68□□□□□ -0.06
LINC00539-204ENST00000608957 ZNRF3Q9ULT6 936 aa14.68□□□□□ -0.06
LINC00539-204ENST00000608957 NSFL1CQ9UNZ2 370 aaKnown RBP14.68□□□□□ -0.06
LINC00539-204ENST00000608957 TRPM7Q96QT4 1865 aa14.67□□□□□ -0.06
LINC00539-204ENST00000608957 EPS15P42566 896 aa14.67□□□□□ -0.06
LINC00539-204ENST00000608957 PLA2G12BQ9BX93 195 aa14.67□□□□□ -0.06
LINC00539-204ENST00000608957 RTL9Q8NET4 1388 aa14.67□□□□□ -0.06
LINC00539-204ENST00000608957 WTIPA6NIX2 430 aaPredicted RBP14.66□□□□□ -0.06
LINC00539-204ENST00000608957 HSP90B1P14625 803 aaKnown RBP14.66□□□□□ -0.06
LINC00539-204ENST00000608957 EAPPQ56P03 285 aaPredicted RBP14.66□□□□□ -0.06
LINC00539-204ENST00000608957 LDHDQ86WU2 507 aa14.66□□□□□ -0.06
LINC00539-204ENST00000608957 TBC1D16Q8TBP0 767 aa14.66□□□□□ -0.06
LINC00539-204ENST00000608957 PODXL2Q9NZ53 605 aa14.66□□□□□ -0.06
LINC00539-204ENST00000608957 C6orf229H3BNL8 230 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms