RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 GRAPLQ8TC17 118 aaPredicted RBP17.42■□□□□ 0.38
POLR2J3-219ENST00000608621 PRKRIP1Q9H875 184 aaPredicted RBP17.42■□□□□ 0.38
POLR2J3-219ENST00000608621 LAMB2P55268 1798 aa17.41■□□□□ 0.38
POLR2J3-219ENST00000608621 ATP5J2-PTCD1G3V325 749 aa17.41■□□□□ 0.38
POLR2J3-219ENST00000608621 FOXN1O15353 648 aa17.41■□□□□ 0.38
POLR2J3-219ENST00000608621 FMR1Q06787 632 aaKnown RBP eCLIP17.41■□□□□ 0.38
POLR2J3-219ENST00000608621 FAM89AQ96GI7 184 aa17.41■□□□□ 0.38
POLR2J3-219ENST00000608621 ISCA1Q9BUE6 129 aa17.41■□□□□ 0.38
POLR2J3-219ENST00000608621 MBIPQ9NS73 344 aa17.41■□□□□ 0.38
POLR2J3-219ENST00000608621 HYPKQ9NX55 129 aa17.41■□□□□ 0.38
POLR2J3-219ENST00000608621 RASSF10A6NK89 507 aa17.4■□□□□ 0.38
POLR2J3-219ENST00000608621 GPRC5DQ9NZD1 345 aa17.4■□□□□ 0.38
POLR2J3-219ENST00000608621 TAF1P21675 1872 aa17.39■□□□□ 0.38
POLR2J3-219ENST00000608621 APAF1O14727 1248 aa17.39■□□□□ 0.37
POLR2J3-219ENST00000608621 ZNF853P0CG23 659 aa17.39■□□□□ 0.37
POLR2J3-219ENST00000608621 KIAA2012Q0VF49 1180 aa17.39■□□□□ 0.37
POLR2J3-219ENST00000608621 CIAPIN1Q6FI81 312 aa17.39■□□□□ 0.37
POLR2J3-219ENST00000608621 ADARB2Q9NS39 739 aaKnown RBP17.39■□□□□ 0.37
POLR2J3-219ENST00000608621 ABT1Q9ULW3 272 aaKnown RBP17.39■□□□□ 0.37
POLR2J3-219ENST00000608621 RAD17O75943 681 aa17.38■□□□□ 0.37
POLR2J3-219ENST00000608621 GMPSP49915 693 aaPredicted RBP17.38■□□□□ 0.37
POLR2J3-219ENST00000608621 SF3B3Q15393 1217 aaKnown RBP17.38■□□□□ 0.37
POLR2J3-219ENST00000608621 RTL5Q5HYW3 569 aaPredicted RBP17.38■□□□□ 0.37
POLR2J3-219ENST00000608621 TRAF5O00463 557 aa17.37■□□□□ 0.37
POLR2J3-219ENST00000608621 ELL2O00472 640 aaPredicted RBP17.37■□□□□ 0.37
POLR2J3-219ENST00000608621 TNIP1Q15025 636 aa17.37■□□□□ 0.37
POLR2J3-219ENST00000608621 TMC4Q7Z404 712 aa17.37■□□□□ 0.37
POLR2J3-219ENST00000608621 RIC3Q7Z5B4 369 aa17.37■□□□□ 0.37
POLR2J3-219ENST00000608621 CELF1Q92879 486 aaKnown RBP17.37■□□□□ 0.37
POLR2J3-219ENST00000608621 AIDAQ96BJ3 306 aa17.37■□□□□ 0.37
POLR2J3-219ENST00000608621 WBP1LQ9NX94 342 aa17.37■□□□□ 0.37
POLR2J3-219ENST00000608621 WDR33Q9C0J8 1336 aaKnown RBP17.37■□□□□ 0.37
POLR2J3-219ENST00000608621 GNAI1P63096 354 aa17.36■□□□□ 0.37
POLR2J3-219ENST00000608621 TRIM28Q13263 835 aaKnown RBP17.36■□□□□ 0.37
POLR2J3-219ENST00000608621 CST9Q5W186 159 aa17.36■□□□□ 0.37
POLR2J3-219ENST00000608621 BCL2L13Q9BXK5 485 aa17.36■□□□□ 0.37
POLR2J3-219ENST00000608621 PHAXQ9H814 394 aaKnown RBP17.36■□□□□ 0.37
POLR2J3-219ENST00000608621 NSFL1CQ9UNZ2 370 aaKnown RBP17.36■□□□□ 0.37
POLR2J3-219ENST00000608621 YDJCA8MPS7 323 aa17.35■□□□□ 0.37
POLR2J3-219ENST00000608621 IRS4O14654 1257 aaPredicted RBP17.35■□□□□ 0.37
POLR2J3-219ENST00000608621 CTCFP49711 727 aaPredicted RBP17.35■□□□□ 0.37
POLR2J3-219ENST00000608621 PRDM10Q9NQV6 1147 aa17.35■□□□□ 0.37
POLR2J3-219ENST00000608621 IFT57Q9NWB7 429 aa17.35■□□□□ 0.37
POLR2J3-219ENST00000608621 WASHC4Q2M389 1173 aa17.34■□□□□ 0.37
POLR2J3-219ENST00000608621 DDX60Q8IY21 1712 aaKnown RBP17.34■□□□□ 0.37
POLR2J3-219ENST00000608621 RIMBP2O15034 1052 aa17.33■□□□□ 0.36
POLR2J3-219ENST00000608621 HIRAP54198 1017 aaPredicted RBP17.33■□□□□ 0.36
POLR2J3-219ENST00000608621 GPSM2P81274 684 aa17.33■□□□□ 0.36
POLR2J3-219ENST00000608621 CALD1Q05682 793 aaKnown RBP17.33■□□□□ 0.36
POLR2J3-219ENST00000608621 GOLGA2Q08379 1002 aa17.33■□□□□ 0.36
POLR2J3-219ENST00000608621 PAXIP1Q6ZW49 1069 aaPredicted RBP17.33■□□□□ 0.36
POLR2J3-219ENST00000608621 C8orf58Q8NAV2 365 aa17.33■□□□□ 0.36
POLR2J3-219ENST00000608621 PGAP2Q9UHJ9 254 aa17.33■□□□□ 0.36
POLR2J3-219ENST00000608621 CNOT7Q9UIV1 285 aaKnown RBP17.33■□□□□ 0.36
POLR2J3-219ENST00000608621 C6orf229H3BNL8 230 aa17.32■□□□□ 0.36
POLR2J3-219ENST00000608621 LBX1P52954 281 aa17.32■□□□□ 0.36
POLR2J3-219ENST00000608621 RPS8P62241 208 aaKnown RBP17.32■□□□□ 0.36
POLR2J3-219ENST00000608621 MAP2K1Q02750 393 aaPredicted RBP17.32■□□□□ 0.36
POLR2J3-219ENST00000608621 CYP4F22Q6NT55 531 aa17.32■□□□□ 0.36
POLR2J3-219ENST00000608621 ZBTB38Q8NAP3 1195 aaPredicted RBP17.32■□□□□ 0.36
POLR2J3-219ENST00000608621 MYD88Q99836 296 aa17.32■□□□□ 0.36
POLR2J3-219ENST00000608621 GLIS2Q9BZE0 524 aaPredicted RBP17.32■□□□□ 0.36
POLR2J3-219ENST00000608621 POLLQ9UGP5 575 aa17.32■□□□□ 0.36
POLR2J3-219ENST00000608621 CDHR2Q9BYE9 1310 aa17.31■□□□□ 0.36
POLR2J3-219ENST00000608621 SHTN1A0MZ66 631 aa17.31■□□□□ 0.36
POLR2J3-219ENST00000608621 H7C1D1 291 aa17.31■□□□□ 0.36
POLR2J3-219ENST00000608621 GRM1Q13255 1194 aa17.31■□□□□ 0.36
POLR2J3-219ENST00000608621 TRPM4Q8TD43 1214 aa17.31■□□□□ 0.36
POLR2J3-219ENST00000608621 CAPNS2Q96L46 248 aa17.31■□□□□ 0.36
POLR2J3-219ENST00000608621 DBNDD1Q9H9R9 158 aa17.31■□□□□ 0.36
POLR2J3-219ENST00000608621 ZBTB12Q9Y330 459 aaPredicted RBP17.31■□□□□ 0.36
POLR2J3-219ENST00000608621 TLL2Q9Y6L7 1015 aa17.31■□□□□ 0.36
POLR2J3-219ENST00000608621 TRPM7Q96QT4 1865 aa17.31■□□□□ 0.36
POLR2J3-219ENST00000608621 PSMD14O00487 310 aa17.3■□□□□ 0.36
POLR2J3-219ENST00000608621 CELF2O95319 508 aaKnown RBP17.3■□□□□ 0.36
POLR2J3-219ENST00000608621 ECE1P42892 770 aa17.3■□□□□ 0.36
POLR2J3-219ENST00000608621 ZC3H15Q8WU90 426 aaKnown RBP17.3■□□□□ 0.36
POLR2J3-219ENST00000608621 JARID2Q92833 1246 aaPredicted RBP17.3■□□□□ 0.36
POLR2J3-219ENST00000608621 GPR101Q96P66 508 aaPredicted RBP17.3■□□□□ 0.36
POLR2J3-219ENST00000608621 SEC31BQ9NQW1 1179 aa17.3■□□□□ 0.36
POLR2J3-219ENST00000608621 KCNQ5Q9NR82 932 aa17.3■□□□□ 0.36
POLR2J3-219ENST00000608621 DUOX1Q9NRD9 1551 aa17.3■□□□□ 0.36
POLR2J3-219ENST00000608621 DOK7Q18PE1 504 aa17.29■□□□□ 0.36
POLR2J3-219ENST00000608621 MICALL2Q8IY33 904 aa17.29■□□□□ 0.36
POLR2J3-219ENST00000608621 CCDC191Q8NCU4 936 aa17.29■□□□□ 0.36
POLR2J3-219ENST00000608621 TBC1D16Q8TBP0 767 aa17.29■□□□□ 0.36
POLR2J3-219ENST00000608621 DPF2Q92785 391 aa17.29■□□□□ 0.36
POLR2J3-219ENST00000608621 EYA3Q99504 573 aa17.29■□□□□ 0.36
POLR2J3-219ENST00000608621 LRRC37AA6NMS7 1700 aa17.29■□□□□ 0.36
POLR2J3-219ENST00000608621 COL4A1P02462 1669 aa17.29■□□□□ 0.36
POLR2J3-219ENST00000608621 PCCAP05165 728 aaPredicted RBP17.28■□□□□ 0.36
POLR2J3-219ENST00000608621 HSPA8P11142 646 aaKnown RBP17.28■□□□□ 0.36
POLR2J3-219ENST00000608621 HSP90B1P14625 803 aaKnown RBP17.28■□□□□ 0.36
POLR2J3-219ENST00000608621 CCDC30Q5VVM6 783 aa17.28■□□□□ 0.36
POLR2J3-219ENST00000608621 CDC37L1Q7L3B6 337 aa17.28■□□□□ 0.36
POLR2J3-219ENST00000608621 METTL22Q9BUU2 404 aaPredicted RBP17.28■□□□□ 0.36
POLR2J3-219ENST00000608621 ECE2O60344 883 aa17.27■□□□□ 0.36
POLR2J3-219ENST00000608621 PDE8AO60658 829 aa17.27■□□□□ 0.36
POLR2J3-219ENST00000608621 DDX58O95786 925 aaKnown RBP17.27■□□□□ 0.36
POLR2J3-219ENST00000608621 CCDC184Q52MB2 194 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms