RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 PDE8AO60658 829 aa16.31■□□□□ 0.2
SHROOM1-207ENST00000606676 HSP90B1P14625 803 aaKnown RBP16.31■□□□□ 0.2
SHROOM1-207ENST00000606676 CASP7P55210 303 aa16.31■□□□□ 0.2
SHROOM1-207ENST00000606676 HNRNPUQ00839 825 aaKnown RBP eCLIP16.31■□□□□ 0.2
SHROOM1-207ENST00000606676 SP8Q8IXZ3 490 aa16.31■□□□□ 0.2
SHROOM1-207ENST00000606676 CELF1Q92879 486 aaKnown RBP16.31■□□□□ 0.2
SHROOM1-207ENST00000606676 COL4A1P02462 1669 aa16.3■□□□□ 0.2
SHROOM1-207ENST00000606676 GRIPAP1Q4V328 841 aa16.3■□□□□ 0.2
SHROOM1-207ENST00000606676 UBE3BQ7Z3V4 1068 aa16.3■□□□□ 0.2
SHROOM1-207ENST00000606676 CT47B1P0C2W7 299 aaPredicted RBP16.29■□□□□ 0.2
SHROOM1-207ENST00000606676 ALDH1L2Q3SY69 923 aa16.29■□□□□ 0.2
SHROOM1-207ENST00000606676 BCL2L13Q9BXK5 485 aa16.29■□□□□ 0.2
SHROOM1-207ENST00000606676 NMRK2Q9NPI5 230 aa16.29■□□□□ 0.2
SHROOM1-207ENST00000606676 SEC31BQ9NQW1 1179 aa16.29■□□□□ 0.2
SHROOM1-207ENST00000606676 GLTPD2A6NH11 291 aa16.28■□□□□ 0.2
SHROOM1-207ENST00000606676 KIF3CO14782 793 aa16.28■□□□□ 0.2
SHROOM1-207ENST00000606676 IARSP41252 1262 aaKnown RBP16.28■□□□□ 0.2
SHROOM1-207ENST00000606676 CTSWP56202 376 aa16.28■□□□□ 0.2
SHROOM1-207ENST00000606676 CCDC152Q4G0S7 254 aa16.28■□□□□ 0.2
SHROOM1-207ENST00000606676 TTLL11Q8NHH1 800 aa16.28■□□□□ 0.2
SHROOM1-207ENST00000606676 CCDC88AQ3V6T2 1871 aa16.27■□□□□ 0.2
SHROOM1-207ENST00000606676 KDM2BQ8NHM5 1336 aa16.27■□□□□ 0.2
SHROOM1-207ENST00000606676 RPS8P62241 208 aaKnown RBP16.27■□□□□ 0.2
SHROOM1-207ENST00000606676 TMC4Q7Z404 712 aa16.27■□□□□ 0.2
SHROOM1-207ENST00000606676 CCDC85AQ96PX6 553 aaPredicted RBP16.27■□□□□ 0.2
SHROOM1-207ENST00000606676 PLA2G12BQ9BX93 195 aa16.27■□□□□ 0.2
SHROOM1-207ENST00000606676 RTFDC1Q9BY42 306 aaPredicted RBP16.27■□□□□ 0.2
SHROOM1-207ENST00000606676 TAF1P21675 1872 aa16.27■□□□□ 0.19
SHROOM1-207ENST00000606676 PTPRCP08575 1304 aa16.26■□□□□ 0.19
SHROOM1-207ENST00000606676 TIAM2Q8IVF5 1701 aa16.26■□□□□ 0.19
SHROOM1-207ENST00000606676 SLC4A10Q6U841 1118 aa16.26■□□□□ 0.19
SHROOM1-207ENST00000606676 TMX4Q9H1E5 349 aaPredicted RBP16.26■□□□□ 0.19
SHROOM1-207ENST00000606676 SMC4Q9NTJ3 1288 aa16.26■□□□□ 0.19
SHROOM1-207ENST00000606676 COL4A5P29400 1685 aa16.25■□□□□ 0.19
SHROOM1-207ENST00000606676 ALDH1L1O75891 902 aa16.25■□□□□ 0.19
SHROOM1-207ENST00000606676 RARSP54136 660 aaKnown RBP16.25■□□□□ 0.19
SHROOM1-207ENST00000606676 BRPF1P55201 1214 aaPredicted RBP16.25■□□□□ 0.19
SHROOM1-207ENST00000606676 DPP8Q6V1X1 898 aaPredicted RBP16.25■□□□□ 0.19
SHROOM1-207ENST00000606676 MPNDQ8N594 471 aa16.25■□□□□ 0.19
SHROOM1-207ENST00000606676 GREM2Q9H772 168 aa16.25■□□□□ 0.19
SHROOM1-207ENST00000606676 DICER1Q9UPY3 1922 aaKnown RBP16.25■□□□□ 0.19
SHROOM1-207ENST00000606676 FZD9O00144 591 aa16.24■□□□□ 0.19
SHROOM1-207ENST00000606676 CSF1RP07333 972 aa16.24■□□□□ 0.19
SHROOM1-207ENST00000606676 C1QTNF8P60827 252 aa16.24■□□□□ 0.19
SHROOM1-207ENST00000606676 DPY19L2Q6NUT2 758 aa16.24■□□□□ 0.19
SHROOM1-207ENST00000606676 SRCIN1Q9C0H9 1055 aa16.24■□□□□ 0.19
SHROOM1-207ENST00000606676 RRAGCQ9HB90 399 aa16.24■□□□□ 0.19
SHROOM1-207ENST00000606676 RTL9Q8NET4 1388 aa16.24■□□□□ 0.19
SHROOM1-207ENST00000606676 LRRC37AA6NMS7 1700 aa16.23■□□□□ 0.19
SHROOM1-207ENST00000606676 POTECB2RU33 542 aa16.23■□□□□ 0.19
SHROOM1-207ENST00000606676 GRM8O00222 908 aa16.23■□□□□ 0.19
SHROOM1-207ENST00000606676 DDNO94850 711 aaPredicted RBP16.23■□□□□ 0.19
SHROOM1-207ENST00000606676 FOXO4P98177 505 aa16.23■□□□□ 0.19
SHROOM1-207ENST00000606676 VPS33BQ9H267 617 aa16.23■□□□□ 0.19
SHROOM1-207ENST00000606676 ZBED9Q6R2W3 1325 aa16.22■□□□□ 0.19
SHROOM1-207ENST00000606676 ZNF541Q9H0D2 1346 aa16.22■□□□□ 0.19
SHROOM1-207ENST00000606676 DUOX1Q9NRD9 1551 aa16.22■□□□□ 0.19
SHROOM1-207ENST00000606676 GPSM2P81274 684 aa16.22■□□□□ 0.19
SHROOM1-207ENST00000606676 AOC3Q16853 763 aa16.22■□□□□ 0.19
SHROOM1-207ENST00000606676 NSFL1CQ9UNZ2 370 aaKnown RBP16.22■□□□□ 0.19
SHROOM1-207ENST00000606676 PPIP5K2O43314 1243 aa16.21■□□□□ 0.19
SHROOM1-207ENST00000606676 EPHA10Q5JZY3 1008 aa16.21■□□□□ 0.19
SHROOM1-207ENST00000606676 ANKRD18AQ8IVF6 992 aa16.21■□□□□ 0.19
SHROOM1-207ENST00000606676 LARGE2Q8N3Y3 721 aa16.21■□□□□ 0.19
SHROOM1-207ENST00000606676 SUPT20HQ8NEM7 779 aa16.21■□□□□ 0.19
SHROOM1-207ENST00000606676 JDP2Q8WYK2 163 aa16.21■□□□□ 0.19
SHROOM1-207ENST00000606676 C9orf78Q9NZ63 289 aaPredicted RBP16.21■□□□□ 0.19
SHROOM1-207ENST00000606676 POLLQ9UGP5 575 aa16.21■□□□□ 0.19
SHROOM1-207ENST00000606676 NOB1Q9ULX3 412 aaKnown RBP16.21■□□□□ 0.19
SHROOM1-207ENST00000606676 UTYO14607 1347 aa16.2■□□□□ 0.18
SHROOM1-207ENST00000606676 NBPF7P0C2Y1 421 aaPredicted RBP16.2■□□□□ 0.18
SHROOM1-207ENST00000606676 VEGFAP15692 232 aaPredicted RBP16.2■□□□□ 0.18
SHROOM1-207ENST00000606676 KIAA2012Q0VF49 1180 aa16.2■□□□□ 0.18
SHROOM1-207ENST00000606676 FAM161AQ3B820 660 aa16.2■□□□□ 0.18
SHROOM1-207ENST00000606676 KAZALD1Q96I82 304 aa16.2■□□□□ 0.18
SHROOM1-207ENST00000606676 CDC5LQ99459 802 aaKnown RBP16.2■□□□□ 0.18
SHROOM1-207ENST00000606676 BSDC1Q9NW68 430 aaPredicted RBP16.2■□□□□ 0.18
SHROOM1-207ENST00000606676 PODXL2Q9NZ53 605 aa16.2■□□□□ 0.18
SHROOM1-207ENST00000606676 CEP350Q5VT06 3117 aa16.2■□□□□ 0.18
SHROOM1-207ENST00000606676 TOMM70O94826 608 aa16.19■□□□□ 0.18
SHROOM1-207ENST00000606676 ITGA6P23229 1130 aa16.19■□□□□ 0.18
SHROOM1-207ENST00000606676 TBC1D16Q8TBP0 767 aa16.19■□□□□ 0.18
SHROOM1-207ENST00000606676 L3MBTL3Q96JM7 780 aaPredicted RBP16.19■□□□□ 0.18
SHROOM1-207ENST00000606676 WDR90Q96KV7 1748 aa16.19■□□□□ 0.18
SHROOM1-207ENST00000606676 LMBR1LQ6UX01 489 aa16.18■□□□□ 0.18
SHROOM1-207ENST00000606676 NIM1KQ8IY84 436 aa16.18■□□□□ 0.18
SHROOM1-207ENST00000606676 SUCLG2Q96I99 432 aa16.18■□□□□ 0.18
SHROOM1-207ENST00000606676 USP44Q9H0E7 712 aa16.18■□□□□ 0.18
SHROOM1-207ENST00000606676 MINPP1Q9UNW1 487 aa16.18■□□□□ 0.18
SHROOM1-207ENST00000606676 LTBP1Q14766 1721 aa16.18■□□□□ 0.18
SHROOM1-207ENST00000606676 WTIPA6NIX2 430 aaPredicted RBP16.17■□□□□ 0.18
SHROOM1-207ENST00000606676 C6orf229H3BNL8 230 aa16.17■□□□□ 0.18
SHROOM1-207ENST00000606676 BCAR3O75815 825 aa16.17■□□□□ 0.18
SHROOM1-207ENST00000606676 EIF6P56537 245 aaKnown RBP16.17■□□□□ 0.18
SHROOM1-207ENST00000606676 GPC2Q8N158 579 aa16.17■□□□□ 0.18
SHROOM1-207ENST00000606676 GPR101Q96P66 508 aaPredicted RBP16.17■□□□□ 0.18
SHROOM1-207ENST00000606676 ANKIB1Q9P2G1 1089 aa16.17■□□□□ 0.18
SHROOM1-207ENST00000606676 MYH3P11055 1940 aa16.17■□□□□ 0.18
SHROOM1-207ENST00000606676 RIMBP2O15034 1052 aa16.16■□□□□ 0.18
SHROOM1-207ENST00000606676 WASHC4Q2M389 1173 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms