RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 SDSP20132 328 aa15.05■□□□□ -0
NEDD8-MDP1-203ENST00000604306 IFIT5Q13325 482 aaKnown RBP15.05■□□□□ -0
NEDD8-MDP1-203ENST00000604306 SUSD4Q5VX71 490 aa15.05■□□□□ -0
NEDD8-MDP1-203ENST00000604306 TTLL11Q8NHH1 800 aa15.05■□□□□ -0
NEDD8-MDP1-203ENST00000604306 PI4K2BQ8TCG2 481 aa15.05■□□□□ -0
NEDD8-MDP1-203ENST00000604306 ABCC12Q96J65 1359 aa15.05■□□□□ -0
NEDD8-MDP1-203ENST00000604306 MYH7P12883 1935 aa15.05■□□□□ -0
NEDD8-MDP1-203ENST00000604306 NRXN2Q9P2S2 1712 aa15.04■□□□□ -0
NEDD8-MDP1-203ENST00000604306 RFX7Q2KHR2 1363 aa15.04■□□□□ -0
NEDD8-MDP1-203ENST00000604306 TRIM37O94972 964 aa15.04■□□□□ -0
NEDD8-MDP1-203ENST00000604306 TBC1D9Q6ZT07 1266 aa15.04■□□□□ -0
NEDD8-MDP1-203ENST00000604306 ATG9AQ7Z3C6 839 aa15.04■□□□□ -0
NEDD8-MDP1-203ENST00000604306 DDRGK1Q96HY6 314 aa15.04■□□□□ -0
NEDD8-MDP1-203ENST00000604306 TBC1D32Q96NH3 1257 aa15.04■□□□□ -0
NEDD8-MDP1-203ENST00000604306 ANKRD18BA2A2Z9 1011 aa15.03■□□□□ -0
NEDD8-MDP1-203ENST00000604306 TNNI3KQ59H18 835 aa15.03■□□□□ -0
NEDD8-MDP1-203ENST00000604306 SLC10A5Q5PT55 438 aa15.03■□□□□ -0
NEDD8-MDP1-203ENST00000604306 TRAPPC3LQ5T215 181 aa15.03■□□□□ -0
NEDD8-MDP1-203ENST00000604306 AACSQ86V21 672 aa15.03■□□□□ -0
NEDD8-MDP1-203ENST00000604306 JARID2Q92833 1246 aaPredicted RBP15.03■□□□□ -0
NEDD8-MDP1-203ENST00000604306 LRRC4BQ9NT99 713 aa15.03■□□□□ -0
NEDD8-MDP1-203ENST00000604306 RGS17Q9UGC6 210 aaPredicted RBP15.03■□□□□ -0
NEDD8-MDP1-203ENST00000604306 FPGT-TNNI3KV9GXZ4 949 aa15.03■□□□□ -0
NEDD8-MDP1-203ENST00000604306 CARMIL3Q8ND23 1372 aa15.02■□□□□ -0
NEDD8-MDP1-203ENST00000604306 CCDC152Q4G0S7 254 aa15.02■□□□□ -0
NEDD8-MDP1-203ENST00000604306 CNTROBQ8N137 903 aa15.02■□□□□ -0
NEDD8-MDP1-203ENST00000604306 ARHGEF1Q92888 912 aaKnown RBP15.02■□□□□ -0
NEDD8-MDP1-203ENST00000604306 EAF2Q96CJ1 260 aaPredicted RBP15.02■□□□□ -0
NEDD8-MDP1-203ENST00000604306 SIL1Q9H173 461 aa15.02■□□□□ -0
NEDD8-MDP1-203ENST00000604306 BCL2L12Q9HB09 334 aa15.02■□□□□ -0
NEDD8-MDP1-203ENST00000604306 AKAP2Q9Y2D5 859 aa15.02■□□□□ -0
NEDD8-MDP1-203ENST00000604306 CHMP3Q9Y3E7 222 aa15.02■□□□□ -0
NEDD8-MDP1-203ENST00000604306 RFC4P35249 363 aa15.01□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 RBM25P49756 843 aaKnown RBP15.01□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 SF3B3Q15393 1217 aaKnown RBP15.01□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 TXNRD1Q16881 649 aa15.01□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 NUTM1Q86Y26 1132 aa15.01□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 KLHDC4Q8TBB5 520 aa15.01□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.01□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 AKAP11Q9UKA4 1901 aa15□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 REC8O95072 547 aa15□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 ATP5JP18859 108 aa15□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 ITGA6P23229 1130 aa15□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 TFCP2Q12800 502 aa15□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 TAF7LQ5H9L4 462 aa15□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 RTL5Q5HYW3 569 aaPredicted RBP15□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 USPL1Q5W0Q7 1092 aa15□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 IL27Q8NEV9 243 aa15□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 FLAD1Q8NFF5 587 aa15□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 SETDB2Q96T68 719 aa15□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 CEP126Q9P2H0 1117 aa15□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 MROH5Q6ZUA9 1318 aa14.99□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 HIP1O00291 1037 aa14.99□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 SEC24BO95487 1268 aa14.99□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 KCNQ4P56696 695 aa14.99□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 EVI5LQ96CN4 794 aa14.99□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 GREM2Q9H772 168 aa14.99□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 RIPOR2Q9Y4F9 1068 aa14.99□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 TNRC6CQ9HCJ0 1690 aaKnown RBP14.98□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 TBC1D9BQ66K14 1250 aa14.98□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 POTEAQ6S8J7 498 aa14.98□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 TPTE2Q6XPS3 522 aa14.98□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 IPO9Q96P70 1041 aaKnown RBP14.98□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 DOCK2Q92608 1830 aa14.98□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 MYH13Q9UKX3 1938 aa14.98□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 EP400Q96L91 3159 aa14.97□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.97□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 LDHAL6AQ6ZMR3 332 aa14.97□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 CDC5LQ99459 802 aaKnown RBP14.97□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 C22orf23Q9BZE7 217 aa14.97□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 DBNLQ9UJU6 430 aaKnown RBP14.97□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 RAD50Q92878 1312 aa14.96□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 TRIM6-TRIM34B2RNG4 842 aa14.96□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 CHMLP26374 656 aa14.96□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 MFAP1P55081 439 aaKnown RBP14.96□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 LRRC24Q50LG9 513 aa14.96□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 SYNE4Q8N205 404 aa14.96□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 PROM2Q8N271 834 aa14.96□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 VGLL2Q8N8G2 317 aa14.96□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 AKT1S1Q96B36 256 aa14.96□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 ZNF512BQ96KM6 892 aaPredicted RBP14.96□□□□□ -0.01
NEDD8-MDP1-203ENST00000604306 TAF1P21675 1872 aa14.95□□□□□ -0.02
NEDD8-MDP1-203ENST00000604306 APBA3O96018 575 aa14.95□□□□□ -0.02
NEDD8-MDP1-203ENST00000604306 NBPF5PQ86XG9 351 aaPredicted RBP14.95□□□□□ -0.02
NEDD8-MDP1-203ENST00000604306 RUFY2Q8WXA3 655 aa14.95□□□□□ -0.02
NEDD8-MDP1-203ENST00000604306 ZNF594Q96JF6 807 aaPredicted RBP14.95□□□□□ -0.02
NEDD8-MDP1-203ENST00000604306 CCDC8Q9H0W5 538 aaPredicted RBP14.95□□□□□ -0.02
NEDD8-MDP1-203ENST00000604306 SRP68Q9UHB9 627 aaKnown RBP14.95□□□□□ -0.02
NEDD8-MDP1-203ENST00000604306 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.95□□□□□ -0.02
NEDD8-MDP1-203ENST00000604306 ANKRD31Q8N7Z5 1873 aa14.95□□□□□ -0.02
NEDD8-MDP1-203ENST00000604306 LRRC37AA6NMS7 1700 aa14.95□□□□□ -0.02
NEDD8-MDP1-203ENST00000604306 A0A1B0GUL7 405 aa14.94□□□□□ -0.02
NEDD8-MDP1-203ENST00000604306 ZBTB22O15209 634 aa14.94□□□□□ -0.02
NEDD8-MDP1-203ENST00000604306 GYS1P13807 737 aa14.94□□□□□ -0.02
NEDD8-MDP1-203ENST00000604306 HCLS1P14317 486 aaPredicted RBP14.94□□□□□ -0.02
NEDD8-MDP1-203ENST00000604306 IGHMBP2P38935 993 aaKnown RBP14.94□□□□□ -0.02
NEDD8-MDP1-203ENST00000604306 ERFEQ4G0M1 354 aa14.94□□□□□ -0.02
NEDD8-MDP1-203ENST00000604306 TSHZ3Q63HK5 1081 aa14.94□□□□□ -0.02
NEDD8-MDP1-203ENST00000604306 AMIGO3Q86WK7 504 aa14.94□□□□□ -0.02
NEDD8-MDP1-203ENST00000604306 RILPL2Q969X0 211 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms