RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 DPP8Q6V1X1 898 aaPredicted RBP23.27■■□□□ 1.32
CCDC12-208ENST00000603885 GPC2Q8N158 579 aa23.27■■□□□ 1.32
CCDC12-208ENST00000603885 VPS33BQ9H267 617 aa23.27■■□□□ 1.32
CCDC12-208ENST00000603885 CWC25Q9NXE8 425 aaPredicted RBP23.27■■□□□ 1.32
CCDC12-208ENST00000603885 MAP3K2Q9Y2U5 619 aa23.27■■□□□ 1.32
CCDC12-208ENST00000603885 COL4A5P29400 1685 aa23.27■■□□□ 1.32
CCDC12-208ENST00000603885 PPIP5K2O43314 1243 aa23.26■■□□□ 1.31
CCDC12-208ENST00000603885 KSR2Q6VAB6 950 aa23.26■■□□□ 1.31
CCDC12-208ENST00000603885 NIM1KQ8IY84 436 aa23.26■■□□□ 1.31
CCDC12-208ENST00000603885 MPNDQ8N594 471 aa23.26■■□□□ 1.31
CCDC12-208ENST00000603885 RTFDC1Q9BY42 306 aaPredicted RBP23.26■■□□□ 1.31
CCDC12-208ENST00000603885 TAF1DQ9H5J8 278 aaPredicted RBP23.25■■□□□ 1.31
CCDC12-208ENST00000603885 HACL1Q9UJ83 578 aa23.25■■□□□ 1.31
CCDC12-208ENST00000603885 TAF1P21675 1872 aa23.25■■□□□ 1.31
CCDC12-208ENST00000603885 PI4KAP2A4QPH2 592 aa23.24■■□□□ 1.31
CCDC12-208ENST00000603885 SLC4A2P04920 1241 aa23.24■■□□□ 1.31
CCDC12-208ENST00000603885 PCCAP05165 728 aaPredicted RBP23.24■■□□□ 1.31
CCDC12-208ENST00000603885 AOC3Q16853 763 aa23.24■■□□□ 1.31
CCDC12-208ENST00000603885 CHADLQ6NUI6 762 aa23.24■■□□□ 1.31
CCDC12-208ENST00000603885 PI4KAP1Q8N8J0 262 aa23.24■■□□□ 1.31
CCDC12-208ENST00000603885 NEXNQ0ZGT2 675 aa23.23■■□□□ 1.31
CCDC12-208ENST00000603885 CELF1Q92879 486 aaKnown RBP23.23■■□□□ 1.31
CCDC12-208ENST00000603885 GJA3Q9Y6H8 435 aa23.23■■□□□ 1.31
CCDC12-208ENST00000603885 LRRC37AA6NMS7 1700 aa23.22■■□□□ 1.31
CCDC12-208ENST00000603885 POTEIP0CG38 1075 aa23.22■■□□□ 1.31
CCDC12-208ENST00000603885 POTEJP0CG39 1038 aa23.22■■□□□ 1.31
CCDC12-208ENST00000603885 HTRA3P83110 453 aa23.22■■□□□ 1.31
CCDC12-208ENST00000603885 DNAJC5GQ8N7S2 189 aa23.22■■□□□ 1.31
CCDC12-208ENST00000603885 EXOSC9Q06265 439 aaKnown RBP23.21■■□□□ 1.31
CCDC12-208ENST00000603885 G2E3Q7L622 706 aa23.21■■□□□ 1.31
CCDC12-208ENST00000603885 LDHDQ86WU2 507 aa23.21■■□□□ 1.31
CCDC12-208ENST00000603885 MYH16Q9H6N6 1097 aa23.21■■□□□ 1.31
CCDC12-208ENST00000603885 PDE8AO60658 829 aa23.2■■□□□ 1.3
CCDC12-208ENST00000603885 EPHX2P34913 555 aa23.2■■□□□ 1.3
CCDC12-208ENST00000603885 EAPPQ56P03 285 aaPredicted RBP23.2■■□□□ 1.3
CCDC12-208ENST00000603885 VAMP4O75379 141 aa23.19■■□□□ 1.3
CCDC12-208ENST00000603885 IGKV5-2P06315 115 aa23.19■■□□□ 1.3
CCDC12-208ENST00000603885 LMOD1P29536 600 aaPredicted RBP23.19■■□□□ 1.3
CCDC12-208ENST00000603885 RPS8P62241 208 aaKnown RBP23.19■■□□□ 1.3
CCDC12-208ENST00000603885 KIAA2012Q0VF49 1180 aa23.19■■□□□ 1.3
CCDC12-208ENST00000603885 FLIIQ13045 1269 aa23.19■■□□□ 1.3
CCDC12-208ENST00000603885 CCDC152Q4G0S7 254 aa23.19■■□□□ 1.3
CCDC12-208ENST00000603885 PNMA8AQ86V59 439 aaPredicted RBP23.19■■□□□ 1.3
CCDC12-208ENST00000603885 JARID2Q92833 1246 aaPredicted RBP23.19■■□□□ 1.3
CCDC12-208ENST00000603885 ZNRF3Q9ULT6 936 aa23.19■■□□□ 1.3
CCDC12-208ENST00000603885 CACNA1FO60840 1977 aa23.18■■□□□ 1.3
CCDC12-208ENST00000603885 CDHR2Q9BYE9 1310 aa23.18■■□□□ 1.3
CCDC12-208ENST00000603885 SPINK5Q9NQ38 1064 aaPredicted RBP23.18■■□□□ 1.3
CCDC12-208ENST00000603885 DUOX1Q9NRD9 1551 aa23.18■■□□□ 1.3
CCDC12-208ENST00000603885 COL4A1P02462 1669 aa23.17■■□□□ 1.3
CCDC12-208ENST00000603885 FKBP5Q13451 457 aaPredicted RBP23.17■■□□□ 1.3
CCDC12-208ENST00000603885 KLRG1Q96E93 195 aa23.17■■□□□ 1.3
CCDC12-208ENST00000603885 NSFL1CQ9UNZ2 370 aaKnown RBP23.17■■□□□ 1.3
CCDC12-208ENST00000603885 NEURL1BA8MQ27 555 aa23.16■■□□□ 1.3
CCDC12-208ENST00000603885 CWF19L2Q2TBE0 894 aaKnown RBP23.16■■□□□ 1.3
CCDC12-208ENST00000603885 SEC31BQ9NQW1 1179 aa23.16■■□□□ 1.3
CCDC12-208ENST00000603885 CLEC11AQ9Y240 323 aa23.16■■□□□ 1.3
CCDC12-208ENST00000603885 SCNN1DP51172 638 aa23.15■■□□□ 1.3
CCDC12-208ENST00000603885 GPSM2P81274 684 aa23.14■■□□□ 1.29
CCDC12-208ENST00000603885 CXCL9Q07325 125 aa23.14■■□□□ 1.29
CCDC12-208ENST00000603885 CCDC85AQ96PX6 553 aaPredicted RBP23.14■■□□□ 1.29
CCDC12-208ENST00000603885 ADAMTSL1Q8N6G6 1762 aa23.14■■□□□ 1.29
CCDC12-208ENST00000603885 C6orf229H3BNL8 230 aa23.13■■□□□ 1.29
CCDC12-208ENST00000603885 CTSWP56202 376 aa23.13■■□□□ 1.29
CCDC12-208ENST00000603885 WASHC4Q2M389 1173 aa23.13■■□□□ 1.29
CCDC12-208ENST00000603885 DNAAF4Q8WXU2 420 aa23.13■■□□□ 1.29
CCDC12-208ENST00000603885 LTBP1Q14766 1721 aa23.13■■□□□ 1.29
CCDC12-208ENST00000603885 EPS15P42566 896 aa23.12■■□□□ 1.29
CCDC12-208ENST00000603885 CIAPIN1Q6FI81 312 aa23.12■■□□□ 1.29
CCDC12-208ENST00000603885 EYA3Q99504 573 aa23.12■■□□□ 1.29
CCDC12-208ENST00000603885 POLLQ9UGP5 575 aa23.12■■□□□ 1.29
CCDC12-208ENST00000603885 ZNF521Q96K83 1311 aa23.11■■□□□ 1.29
CCDC12-208ENST00000603885 GCKRQ14397 625 aa23.11■■□□□ 1.29
CCDC12-208ENST00000603885 TNIP1Q15025 636 aa23.11■■□□□ 1.29
CCDC12-208ENST00000603885 UBE3BQ7Z3V4 1068 aa23.11■■□□□ 1.29
CCDC12-208ENST00000603885 ANKRD18AQ8IVF6 992 aa23.11■■□□□ 1.29
CCDC12-208ENST00000603885 PASKQ96RG2 1323 aa23.1■■□□□ 1.29
CCDC12-208ENST00000603885 MYH3P11055 1940 aa23.1■■□□□ 1.29
CCDC12-208ENST00000603885 H7C1W4 665 aa23.1■■□□□ 1.29
CCDC12-208ENST00000603885 RAD17O75943 681 aa23.1■■□□□ 1.29
CCDC12-208ENST00000603885 LINS1Q8NG48 757 aa23.1■■□□□ 1.29
CCDC12-208ENST00000603885 TTLL11Q8NHH1 800 aa23.1■■□□□ 1.29
CCDC12-208ENST00000603885 TBC1D16Q8TBP0 767 aa23.1■■□□□ 1.29
CCDC12-208ENST00000603885 CDC5LQ99459 802 aaKnown RBP23.1■■□□□ 1.29
CCDC12-208ENST00000603885 CREBZFQ9NS37 354 aa23.1■■□□□ 1.29
CCDC12-208ENST00000603885 PODXL2Q9NZ53 605 aa23.1■■□□□ 1.29
CCDC12-208ENST00000603885 GPRC5DQ9NZD1 345 aa23.1■■□□□ 1.29
CCDC12-208ENST00000603885 ANKIB1Q9P2G1 1089 aa23.1■■□□□ 1.29
CCDC12-208ENST00000603885 RIMBP2O15034 1052 aa23.09■■□□□ 1.29
CCDC12-208ENST00000603885 ITGBL1O95965 494 aaPredicted RBP23.09■■□□□ 1.29
CCDC12-208ENST00000603885 USP50Q70EL3 339 aaPredicted RBP23.09■■□□□ 1.29
CCDC12-208ENST00000603885 YDJCA8MPS7 323 aa23.08■■□□□ 1.29
CCDC12-208ENST00000603885 GMPSP49915 693 aaPredicted RBP23.08■■□□□ 1.29
CCDC12-208ENST00000603885 MAP1SQ66K74 1059 aaPredicted RBP23.08■■□□□ 1.29
CCDC12-208ENST00000603885 CNTROBQ8N137 903 aa23.08■■□□□ 1.29
CCDC12-208ENST00000603885 JMYQ8N9B5 988 aa23.08■■□□□ 1.29
CCDC12-208ENST00000603885 BCL2L13Q9BXK5 485 aa23.08■■□□□ 1.29
CCDC12-208ENST00000603885 ADARB2Q9NS39 739 aaKnown RBP23.08■■□□□ 1.29
CCDC12-208ENST00000603885 RTL9Q8NET4 1388 aa23.07■■□□□ 1.28
CCDC12-208ENST00000603885 UFL1O94874 794 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms