RNA–Protein interactions for RNA: ENST00000603334.1

DDX55P1-201, Transcript of DEAD-box helicase 55 pseudogene 1, humanhuman

BASIC

Gene DDX55P1, Length 1,414 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55P1-201ENST00000603334 PIM2Q9P1W9 311 aa12.84□□□□□ -0.35
DDX55P1-201ENST00000603334 ZBTB47Q9UFB7 747 aaPredicted RBP12.84□□□□□ -0.35
DDX55P1-201ENST00000603334 HDAC5Q9UQL6 1122 aa12.84□□□□□ -0.35
DDX55P1-201ENST00000603334 FER1L6Q2WGJ9 1857 aa12.84□□□□□ -0.35
DDX55P1-201ENST00000603334 SLX4Q8IY92 1834 aa12.83□□□□□ -0.36
DDX55P1-201ENST00000603334 RIC1Q4ADV7 1423 aa12.83□□□□□ -0.36
DDX55P1-201ENST00000603334 KLRG2A4D1S0 409 aaPredicted RBP12.83□□□□□ -0.36
DDX55P1-201ENST00000603334 H0YIN7 160 aa12.83□□□□□ -0.36
DDX55P1-201ENST00000603334 HMMRO75330 724 aa12.83□□□□□ -0.36
DDX55P1-201ENST00000603334 GTF2E1P29083 439 aaPredicted RBP12.83□□□□□ -0.36
DDX55P1-201ENST00000603334 SKAP1Q86WV1 359 aa12.83□□□□□ -0.36
DDX55P1-201ENST00000603334 CCDC24Q8N4L8 307 aa12.83□□□□□ -0.36
DDX55P1-201ENST00000603334 ANKRD44Q8N8A2 993 aa12.83□□□□□ -0.36
DDX55P1-201ENST00000603334 LINS1Q8NG48 757 aa12.83□□□□□ -0.36
DDX55P1-201ENST00000603334 ISCA1Q9BUE6 129 aa12.83□□□□□ -0.36
DDX55P1-201ENST00000603334 USP44Q9H0E7 712 aa12.83□□□□□ -0.36
DDX55P1-201ENST00000603334 ANKRD36CQ5JPF3 1778 aa12.83□□□□□ -0.36
DDX55P1-201ENST00000603334 HSP90B1P14625 803 aaKnown RBP12.82□□□□□ -0.36
DDX55P1-201ENST00000603334 CWF19L2Q2TBE0 894 aaKnown RBP12.82□□□□□ -0.36
DDX55P1-201ENST00000603334 SLC10A5Q5PT55 438 aa12.82□□□□□ -0.36
DDX55P1-201ENST00000603334 NLRP10Q86W26 655 aa12.82□□□□□ -0.36
DDX55P1-201ENST00000603334 UTP14AQ9BVJ6 771 aaKnown RBP12.82□□□□□ -0.36
DDX55P1-201ENST00000603334 LRRFIP2Q9Y608 721 aaKnown RBP12.82□□□□□ -0.36
DDX55P1-201ENST00000603334 CEP350Q5VT06 3117 aa12.82□□□□□ -0.36
DDX55P1-201ENST00000603334 ATP5J2-PTCD1G3V325 749 aa12.81□□□□□ -0.36
DDX55P1-201ENST00000603334 PRELPP51888 382 aa12.81□□□□□ -0.36
DDX55P1-201ENST00000603334 DALRD3Q5D0E6 543 aaKnown RBP12.81□□□□□ -0.36
DDX55P1-201ENST00000603334 SUSD4Q5VX71 490 aa12.81□□□□□ -0.36
DDX55P1-201ENST00000603334 CEP85Q6P2H3 762 aa12.81□□□□□ -0.36
DDX55P1-201ENST00000603334 GCC1Q96CN9 775 aa12.81□□□□□ -0.36
DDX55P1-201ENST00000603334 BCL11AQ9H165 835 aa12.81□□□□□ -0.36
DDX55P1-201ENST00000603334 UBN2Q6ZU65 1347 aa12.81□□□□□ -0.36
DDX55P1-201ENST00000603334 TIAM2Q8IVF5 1701 aa12.81□□□□□ -0.36
DDX55P1-201ENST00000603334 NTSR2O95665 410 aa12.8□□□□□ -0.36
DDX55P1-201ENST00000603334 GPTP24298 496 aa12.8□□□□□ -0.36
DDX55P1-201ENST00000603334 ATP8B2P98198 1209 aa12.8□□□□□ -0.36
DDX55P1-201ENST00000603334 ANKRD45Q5TZF3 282 aa12.8□□□□□ -0.36
DDX55P1-201ENST00000603334 STYK1Q6J9G0 422 aa12.8□□□□□ -0.36
DDX55P1-201ENST00000603334 C2CD5Q86YS7 1000 aa12.8□□□□□ -0.36
DDX55P1-201ENST00000603334 SIRT2Q8IXJ6 389 aa12.8□□□□□ -0.36
DDX55P1-201ENST00000603334 CCDC191Q8NCU4 936 aa12.8□□□□□ -0.36
DDX55P1-201ENST00000603334 DICER1Q9UPY3 1922 aaKnown RBP12.8□□□□□ -0.36
DDX55P1-201ENST00000603334 NEURL1BA8MQ27 555 aa12.79□□□□□ -0.36
DDX55P1-201ENST00000603334 NBPF7P0C2Y1 421 aaPredicted RBP12.79□□□□□ -0.36
DDX55P1-201ENST00000603334 SRGNP10124 158 aa12.79□□□□□ -0.36
DDX55P1-201ENST00000603334 CRY2Q49AN0 593 aa12.79□□□□□ -0.36
DDX55P1-201ENST00000603334 ARHGAP27Q6ZUM4 889 aa12.79□□□□□ -0.36
DDX55P1-201ENST00000603334 CNKSR1Q969H4 720 aa12.79□□□□□ -0.36
DDX55P1-201ENST00000603334 MASTLQ96GX5 879 aa12.79□□□□□ -0.36
DDX55P1-201ENST00000603334 SH3TC1Q8TE82 1336 aa12.79□□□□□ -0.36
DDX55P1-201ENST00000603334 APBB1O00213 710 aa12.79□□□□□ -0.36
DDX55P1-201ENST00000603334 GRM8O00222 908 aa12.79□□□□□ -0.36
DDX55P1-201ENST00000603334 IGKV5-2P06315 115 aa12.79□□□□□ -0.36
DDX55P1-201ENST00000603334 NPR1P16066 1061 aa12.79□□□□□ -0.36
DDX55P1-201ENST00000603334 SMC5Q8IY18 1101 aa12.79□□□□□ -0.36
DDX55P1-201ENST00000603334 TTLL6Q8N841 843 aa12.79□□□□□ -0.36
DDX55P1-201ENST00000603334 LAMB2P55268 1798 aa12.78□□□□□ -0.36
DDX55P1-201ENST00000603334 ALDH1B1P30837 517 aa12.78□□□□□ -0.36
DDX55P1-201ENST00000603334 GCKRQ14397 625 aa12.78□□□□□ -0.36
DDX55P1-201ENST00000603334 ERFEQ4G0M1 354 aa12.78□□□□□ -0.36
DDX55P1-201ENST00000603334 JARID2Q92833 1246 aaPredicted RBP12.78□□□□□ -0.36
DDX55P1-201ENST00000603334 NLRP3Q96P20 1036 aa12.78□□□□□ -0.36
DDX55P1-201ENST00000603334 DCTPP1Q9H773 170 aa12.78□□□□□ -0.36
DDX55P1-201ENST00000603334 TRMT112Q9UI30 125 aaKnown RBP12.78□□□□□ -0.36
DDX55P1-201ENST00000603334 ABCC12Q96J65 1359 aa12.77□□□□□ -0.37
DDX55P1-201ENST00000603334 HOXA10P31260 410 aaPredicted RBP12.77□□□□□ -0.37
DDX55P1-201ENST00000603334 C1QTNF8P60827 252 aa12.77□□□□□ -0.37
DDX55P1-201ENST00000603334 RASSF7Q02833 373 aa12.77□□□□□ -0.37
DDX55P1-201ENST00000603334 SOGA3Q5TF21 947 aa12.77□□□□□ -0.37
DDX55P1-201ENST00000603334 ZBTB38Q8NAP3 1195 aaPredicted RBP12.77□□□□□ -0.37
DDX55P1-201ENST00000603334 LNPKQ9C0E8 428 aa12.77□□□□□ -0.37
DDX55P1-201ENST00000603334 CWC25Q9NXE8 425 aaPredicted RBP12.77□□□□□ -0.37
DDX55P1-201ENST00000603334 FAM177BA6PVY3 158 aa12.76□□□□□ -0.37
DDX55P1-201ENST00000603334 NFKBIEO00221 500 aa12.76□□□□□ -0.37
DDX55P1-201ENST00000603334 PCCAP05165 728 aaPredicted RBP12.76□□□□□ -0.37
DDX55P1-201ENST00000603334 NUCB1Q02818 461 aa12.76□□□□□ -0.37
DDX55P1-201ENST00000603334 GRIPAP1Q4V328 841 aa12.76□□□□□ -0.37
DDX55P1-201ENST00000603334 CHD1LQ86WJ1 897 aa12.76□□□□□ -0.37
DDX55P1-201ENST00000603334 NUTM1Q86Y26 1132 aa12.76□□□□□ -0.37
DDX55P1-201ENST00000603334 ZNF526Q8TF50 670 aaPredicted RBP12.76□□□□□ -0.37
DDX55P1-201ENST00000603334 SUCLG2Q96I99 432 aa12.76□□□□□ -0.37
DDX55P1-201ENST00000603334 PNMA6EA0A0J9YXQ4 647 aa12.75□□□□□ -0.37
DDX55P1-201ENST00000603334 KIF3CO14782 793 aa12.75□□□□□ -0.37
DDX55P1-201ENST00000603334 SRGAP3O43295 1099 aa12.75□□□□□ -0.37
DDX55P1-201ENST00000603334 RTL5Q5HYW3 569 aaPredicted RBP12.75□□□□□ -0.37
DDX55P1-201ENST00000603334 C9orf131Q5VYM1 1079 aa12.75□□□□□ -0.37
DDX55P1-201ENST00000603334 ZNF622Q969S3 477 aaKnown RBP eCLIP12.75□□□□□ -0.37
DDX55P1-201ENST00000603334 CRAMP1Q96RY5 1269 aa12.75□□□□□ -0.37
DDX55P1-201ENST00000603334 SNED1Q8TER0 1413 aa12.74□□□□□ -0.37
DDX55P1-201ENST00000603334 CDHR2Q9BYE9 1310 aa12.74□□□□□ -0.37
DDX55P1-201ENST00000603334 OS9Q13438 667 aaPredicted RBP12.74□□□□□ -0.37
DDX55P1-201ENST00000603334 UBE3BQ7Z3V4 1068 aa12.74□□□□□ -0.37
DDX55P1-201ENST00000603334 RPGRQ92834 1020 aaKnown RBP12.74□□□□□ -0.37
DDX55P1-201ENST00000603334 RBM17Q96I25 401 aaKnown RBP12.74□□□□□ -0.37
DDX55P1-201ENST00000603334 GPBP1L1Q9HC44 474 aaPredicted RBP12.74□□□□□ -0.37
DDX55P1-201ENST00000603334 DDX60Q8IY21 1712 aaKnown RBP12.74□□□□□ -0.37
DDX55P1-201ENST00000603334 SURF6O75683 361 aaKnown RBP12.73□□□□□ -0.37
DDX55P1-201ENST00000603334 SF3B3Q15393 1217 aaKnown RBP12.73□□□□□ -0.37
DDX55P1-201ENST00000603334 CC2D2BQ6DHV5 1058 aa12.73□□□□□ -0.37
DDX55P1-201ENST00000603334 C7orf43Q8WVR3 580 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms