RNA–Protein interactions for RNA: ENST00000602897.1

PPFIA3-212, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 1,615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-212ENST00000602897 YY1P25490 414 aa27.48■■□□□ 1.99
PPFIA3-212ENST00000602897 RHPN1Q8TCX5 695 aa27.48■■□□□ 1.99
PPFIA3-212ENST00000602897 TBC1D9BQ66K14 1250 aa27.47■■□□□ 1.99
PPFIA3-212ENST00000602897 UPF2Q9HAU5 1272 aaKnown RBP27.47■■□□□ 1.99
PPFIA3-212ENST00000602897 A0A0G2JLW4 131 aa27.46■■□□□ 1.99
PPFIA3-212ENST00000602897 SERPINB2P05120 415 aa27.46■■□□□ 1.99
PPFIA3-212ENST00000602897 STAP2Q9UGK3 403 aa27.46■■□□□ 1.99
PPFIA3-212ENST00000602897 AOX1Q06278 1338 aa27.46■■□□□ 1.99
PPFIA3-212ENST00000602897 SALL3Q9BXA9 1300 aa27.46■■□□□ 1.99
PPFIA3-212ENST00000602897 GRIN3BO60391 1043 aa27.45■■□□□ 1.99
PPFIA3-212ENST00000602897 SCN7AQ01118 1682 aa27.45■■□□□ 1.98
PPFIA3-212ENST00000602897 KIF13BQ9NQT8 1826 aa27.45■■□□□ 1.98
PPFIA3-212ENST00000602897 PDE1AP54750 535 aa27.45■■□□□ 1.98
PPFIA3-212ENST00000602897 DPEP1P16444 411 aa27.44■■□□□ 1.98
PPFIA3-212ENST00000602897 G3BP1Q13283 466 aaKnown RBP eCLIP27.42■■□□□ 1.98
PPFIA3-212ENST00000602897 OS9Q13438 667 aaPredicted RBP27.42■■□□□ 1.98
PPFIA3-212ENST00000602897 EPHA10Q5JZY3 1008 aa27.42■■□□□ 1.98
PPFIA3-212ENST00000602897 OTUD7AQ8TE49 926 aaPredicted RBP27.42■■□□□ 1.98
PPFIA3-212ENST00000602897 COPRSQ9NQ92 184 aa27.42■■□□□ 1.98
PPFIA3-212ENST00000602897 ZNF652Q9Y2D9 606 aa27.42■■□□□ 1.98
PPFIA3-212ENST00000602897 PCCAP05165 728 aaPredicted RBP27.41■■□□□ 1.98
PPFIA3-212ENST00000602897 MX1P20591 662 aa27.41■■□□□ 1.98
PPFIA3-212ENST00000602897 CLEC4GQ6UXB4 293 aa27.41■■□□□ 1.98
PPFIA3-212ENST00000602897 SETDB2Q96T68 719 aa27.41■■□□□ 1.98
PPFIA3-212ENST00000602897 GSPT1P15170 499 aaKnown RBP27.41■■□□□ 1.98
PPFIA3-212ENST00000602897 CARMIL3Q8ND23 1372 aa27.4■■□□□ 1.98
PPFIA3-212ENST00000602897 RGL2O15211 777 aa27.4■■□□□ 1.98
PPFIA3-212ENST00000602897 CDC45O75419 566 aa27.4■■□□□ 1.98
PPFIA3-212ENST00000602897 FOXO4P98177 505 aa27.4■■□□□ 1.98
PPFIA3-212ENST00000602897 CLASRPQ8N2M8 674 aaKnown RBP27.39■■□□□ 1.98
PPFIA3-212ENST00000602897 ZBTB38Q8NAP3 1195 aaPredicted RBP27.39■■□□□ 1.98
PPFIA3-212ENST00000602897 PLA2G12BQ9BX93 195 aa27.39■■□□□ 1.98
PPFIA3-212ENST00000602897 ANKRD36CQ5JPF3 1778 aa27.39■■□□□ 1.97
PPFIA3-212ENST00000602897 KIAA1551Q9HCM1 1747 aa27.38■■□□□ 1.97
PPFIA3-212ENST00000602897 CDHR2Q9BYE9 1310 aa27.38■■□□□ 1.97
PPFIA3-212ENST00000602897 SEC24BO95487 1268 aa27.38■■□□□ 1.97
PPFIA3-212ENST00000602897 RFX5P48382 616 aaPredicted RBP27.38■■□□□ 1.97
PPFIA3-212ENST00000602897 BCS1LQ9Y276 419 aa27.38■■□□□ 1.97
PPFIA3-212ENST00000602897 BCORQ6W2J9 1755 aa27.37■■□□□ 1.97
PPFIA3-212ENST00000602897 KCNA3P22001 575 aa27.37■■□□□ 1.97
PPFIA3-212ENST00000602897 CHRNA5P30532 468 aa27.37■■□□□ 1.97
PPFIA3-212ENST00000602897 HLFQ16534 295 aa27.37■■□□□ 1.97
PPFIA3-212ENST00000602897 NLRP10Q86W26 655 aa27.37■■□□□ 1.97
PPFIA3-212ENST00000602897 DDRGK1Q96HY6 314 aa27.37■■□□□ 1.97
PPFIA3-212ENST00000602897 IPO9Q96P70 1041 aaKnown RBP27.37■■□□□ 1.97
PPFIA3-212ENST00000602897 IL1RAPL2Q9NP60 686 aa27.37■■□□□ 1.97
PPFIA3-212ENST00000602897 NRXN2Q9P2S2 1712 aa27.36■■□□□ 1.97
PPFIA3-212ENST00000602897 LMBR1LQ6UX01 489 aa27.36■■□□□ 1.97
PPFIA3-212ENST00000602897 ZNF34Q8IZ26 560 aa27.36■■□□□ 1.97
PPFIA3-212ENST00000602897 PA2G4Q9UQ80 394 aaKnown RBP27.36■■□□□ 1.97
PPFIA3-212ENST00000602897 NUP98P52948 1817 aa27.35■■□□□ 1.97
PPFIA3-212ENST00000602897 NPHP1O15259 732 aa27.35■■□□□ 1.97
PPFIA3-212ENST00000602897 JARID2Q92833 1246 aaPredicted RBP27.35■■□□□ 1.97
PPFIA3-212ENST00000602897 PIM2Q9P1W9 311 aa27.35■■□□□ 1.97
PPFIA3-212ENST00000602897 TTC41PQ6P2S7 1318 aa27.35■■□□□ 1.97
PPFIA3-212ENST00000602897 PRR5LQ6MZQ0 368 aa27.34■■□□□ 1.97
PPFIA3-212ENST00000602897 SDSP20132 328 aa27.34■■□□□ 1.97
PPFIA3-212ENST00000602897 PTPN12Q05209 780 aaKnown RBP27.34■■□□□ 1.97
PPFIA3-212ENST00000602897 CASC1Q6TDU7 716 aa27.34■■□□□ 1.97
PPFIA3-212ENST00000602897 CNBD1Q8NA66 436 aa27.34■■□□□ 1.97
PPFIA3-212ENST00000602897 NIP7Q9Y221 180 aaKnown RBP eCLIP27.34■■□□□ 1.97
PPFIA3-212ENST00000602897 TBC1D9Q6ZT07 1266 aa27.33■■□□□ 1.97
PPFIA3-212ENST00000602897 CCDC24Q8N4L8 307 aa27.33■■□□□ 1.97
PPFIA3-212ENST00000602897 BCL11AQ9H165 835 aa27.33■■□□□ 1.97
PPFIA3-212ENST00000602897 SASH1O94885 1247 aa27.32■■□□□ 1.96
PPFIA3-212ENST00000602897 NBPF5PQ86XG9 351 aaPredicted RBP27.32■■□□□ 1.96
PPFIA3-212ENST00000602897 GPATCH3Q96I76 525 aa27.32■■□□□ 1.96
PPFIA3-212ENST00000602897 TBC1D32Q96NH3 1257 aa27.32■■□□□ 1.96
PPFIA3-212ENST00000602897 CHD4Q14839 1912 aa27.31■■□□□ 1.96
PPFIA3-212ENST00000602897 PARP10Q53GL7 1025 aa27.31■■□□□ 1.96
PPFIA3-212ENST00000602897 FBXO3Q9UK99 471 aa27.31■■□□□ 1.96
PPFIA3-212ENST00000602897 DALRD3Q5D0E6 543 aaKnown RBP27.3■■□□□ 1.96
PPFIA3-212ENST00000602897 NUTM1Q86Y26 1132 aa27.3■■□□□ 1.96
PPFIA3-212ENST00000602897 BRIP1Q9BX63 1249 aa27.3■■□□□ 1.96
PPFIA3-212ENST00000602897 CSF1RP07333 972 aa27.3■■□□□ 1.96
PPFIA3-212ENST00000602897 IFIT2P09913 472 aaKnown RBP27.3■■□□□ 1.96
PPFIA3-212ENST00000602897 ST5P78524 1137 aa27.3■■□□□ 1.96
PPFIA3-212ENST00000602897 C2CD5Q86YS7 1000 aa27.3■■□□□ 1.96
PPFIA3-212ENST00000602897 H0YIN7 160 aa27.29■■□□□ 1.96
PPFIA3-212ENST00000602897 ERC2O15083 957 aa27.29■■□□□ 1.96
PPFIA3-212ENST00000602897 HSP90B1P14625 803 aaKnown RBP27.28■■□□□ 1.96
PPFIA3-212ENST00000602897 PDE6BP35913 854 aa27.28■■□□□ 1.96
PPFIA3-212ENST00000602897 FAM89AQ96GI7 184 aa27.28■■□□□ 1.96
PPFIA3-212ENST00000602897 FAM177BA6PVY3 158 aa27.27■■□□□ 1.96
PPFIA3-212ENST00000602897 GPTP24298 496 aa27.27■■□□□ 1.96
PPFIA3-212ENST00000602897 TPTE2Q6XPS3 522 aa27.27■■□□□ 1.96
PPFIA3-212ENST00000602897 TRMT112Q9UI30 125 aaKnown RBP27.27■■□□□ 1.96
PPFIA3-212ENST00000602897 GLRX3O76003 335 aaKnown RBP27.27■■□□□ 1.96
PPFIA3-212ENST00000602897 CIAO1O76071 339 aa27.27■■□□□ 1.96
PPFIA3-212ENST00000602897 MFAP1P55081 439 aaKnown RBP27.27■■□□□ 1.96
PPFIA3-212ENST00000602897 RTL5Q5HYW3 569 aaPredicted RBP27.27■■□□□ 1.96
PPFIA3-212ENST00000602897 SIL1Q9H173 461 aa27.27■■□□□ 1.96
PPFIA3-212ENST00000602897 ECHDC1Q9NTX5 307 aa27.27■■□□□ 1.96
PPFIA3-212ENST00000602897 CHMP3Q9Y3E7 222 aa27.27■■□□□ 1.96
PPFIA3-212ENST00000602897 PI4K2BQ8TCG2 481 aa27.26■■□□□ 1.95
PPFIA3-212ENST00000602897 C22orf23Q9BZE7 217 aa27.26■■□□□ 1.95
PPFIA3-212ENST00000602897 BRCA1P38398 1863 aaKnown RBP27.25■■□□□ 1.95
PPFIA3-212ENST00000602897 IL15P40933 162 aaPredicted RBP27.25■■□□□ 1.95
PPFIA3-212ENST00000602897 CCDC57Q2TAC2 916 aa27.25■■□□□ 1.95
PPFIA3-212ENST00000602897 ARHGAP27Q6ZUM4 889 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms