RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 RTFDC1Q9BY42 306 aaPredicted RBP27.5■■□□□ 1.99
PPFIA3-209ENST00000602783 FAM89AQ96GI7 184 aa27.49■■□□□ 1.99
PPFIA3-209ENST00000602783 IFT57Q9NWB7 429 aa27.49■■□□□ 1.99
PPFIA3-209ENST00000602783 LAMB2P55268 1798 aa27.49■■□□□ 1.99
PPFIA3-209ENST00000602783 ELL2O00472 640 aaPredicted RBP27.48■■□□□ 1.99
PPFIA3-209ENST00000602783 GNAI1P63096 354 aa27.48■■□□□ 1.99
PPFIA3-209ENST00000602783 ADAMTSL1Q8N6G6 1762 aa27.48■■□□□ 1.99
PPFIA3-209ENST00000602783 CALD1Q05682 793 aaKnown RBP27.47■■□□□ 1.99
PPFIA3-209ENST00000602783 ZNRF3Q9ULT6 936 aa27.47■■□□□ 1.99
PPFIA3-209ENST00000602783 CNTNAP1P78357 1384 aa27.47■■□□□ 1.99
PPFIA3-209ENST00000602783 CXCL9Q07325 125 aa27.45■■□□□ 1.98
PPFIA3-209ENST00000602783 RTL5Q5HYW3 569 aaPredicted RBP27.45■■□□□ 1.98
PPFIA3-209ENST00000602783 RIC3Q7Z5B4 369 aa27.45■■□□□ 1.98
PPFIA3-209ENST00000602783 LTBP1Q14766 1721 aa27.44■■□□□ 1.98
PPFIA3-209ENST00000602783 KIAA2012Q0VF49 1180 aa27.44■■□□□ 1.98
PPFIA3-209ENST00000602783 SF3B3Q15393 1217 aaKnown RBP27.44■■□□□ 1.98
PPFIA3-209ENST00000602783 TMC4Q7Z404 712 aa27.44■■□□□ 1.98
PPFIA3-209ENST00000602783 PHAXQ9H814 394 aaKnown RBP27.44■■□□□ 1.98
PPFIA3-209ENST00000602783 TAF1P21675 1872 aa27.43■■□□□ 1.98
PPFIA3-209ENST00000602783 GOLGA2Q08379 1002 aa27.43■■□□□ 1.98
PPFIA3-209ENST00000602783 TRIM28Q13263 835 aaKnown RBP27.43■■□□□ 1.98
PPFIA3-209ENST00000602783 USP50Q70EL3 339 aaPredicted RBP27.43■■□□□ 1.98
PPFIA3-209ENST00000602783 VEGFBP49765 207 aa27.42■■□□□ 1.98
PPFIA3-209ENST00000602783 IRS4O14654 1257 aaPredicted RBP27.41■■□□□ 1.98
PPFIA3-209ENST00000602783 ANP32CO43423 234 aa27.41■■□□□ 1.98
PPFIA3-209ENST00000602783 TNS4Q8IZW8 715 aa27.41■■□□□ 1.98
PPFIA3-209ENST00000602783 C8orf58Q8NAV2 365 aa27.41■■□□□ 1.98
PPFIA3-209ENST00000602783 CELF1Q92879 486 aaKnown RBP27.41■■□□□ 1.98
PPFIA3-209ENST00000602783 GPRC5DQ9NZD1 345 aa27.41■■□□□ 1.98
PPFIA3-209ENST00000602783 CIAPIN1Q6FI81 312 aa27.4■■□□□ 1.98
PPFIA3-209ENST00000602783 DDX60Q8IY21 1712 aaKnown RBP27.39■■□□□ 1.98
PPFIA3-209ENST00000602783 RAD17O75943 681 aa27.39■■□□□ 1.98
PPFIA3-209ENST00000602783 GMPSP49915 693 aaPredicted RBP27.39■■□□□ 1.98
PPFIA3-209ENST00000602783 MRS2Q9HD23 443 aa27.39■■□□□ 1.98
PPFIA3-209ENST00000602783 ADARB2Q9NS39 739 aaKnown RBP27.39■■□□□ 1.98
PPFIA3-209ENST00000602783 NSFL1CQ9UNZ2 370 aaKnown RBP27.39■■□□□ 1.98
PPFIA3-209ENST00000602783 FMR1Q06787 632 aaKnown RBP eCLIP27.38■■□□□ 1.97
PPFIA3-209ENST00000602783 TNIP1Q15025 636 aa27.38■■□□□ 1.97
PPFIA3-209ENST00000602783 DEFB115Q30KQ5 88 aa27.38■■□□□ 1.97
PPFIA3-209ENST00000602783 MYD88Q99836 296 aa27.38■■□□□ 1.97
PPFIA3-209ENST00000602783 ZBTB38Q8NAP3 1195 aaPredicted RBP27.37■■□□□ 1.97
PPFIA3-209ENST00000602783 BCL2L13Q9BXK5 485 aa27.37■■□□□ 1.97
PPFIA3-209ENST00000602783 ABT1Q9ULW3 272 aaKnown RBP27.37■■□□□ 1.97
PPFIA3-209ENST00000602783 RASSF10A6NK89 507 aa27.36■■□□□ 1.97
PPFIA3-209ENST00000602783 YDJCA8MPS7 323 aa27.35■■□□□ 1.97
PPFIA3-209ENST00000602783 WASHC4Q2M389 1173 aa27.35■■□□□ 1.97
PPFIA3-209ENST00000602783 CCDC30Q5VVM6 783 aa27.35■■□□□ 1.97
PPFIA3-209ENST00000602783 CHMP4AQ9BY43 222 aa27.35■■□□□ 1.97
PPFIA3-209ENST00000602783 C6orf229H3BNL8 230 aa27.34■■□□□ 1.97
PPFIA3-209ENST00000602783 RPS8P62241 208 aaKnown RBP27.34■■□□□ 1.97
PPFIA3-209ENST00000602783 TSPYL6Q8N831 410 aa27.34■■□□□ 1.97
PPFIA3-209ENST00000602783 TRAF5O00463 557 aa27.33■■□□□ 1.97
PPFIA3-209ENST00000602783 RIMBP2O15034 1052 aa27.33■■□□□ 1.97
PPFIA3-209ENST00000602783 FOXN1O15353 648 aa27.33■■□□□ 1.97
PPFIA3-209ENST00000602783 HSP90B1P14625 803 aaKnown RBP27.33■■□□□ 1.97
PPFIA3-209ENST00000602783 GPSM2P81274 684 aa27.33■■□□□ 1.97
PPFIA3-209ENST00000602783 CCDC191Q8NCU4 936 aa27.33■■□□□ 1.97
PPFIA3-209ENST00000602783 POLLQ9UGP5 575 aa27.33■■□□□ 1.97
PPFIA3-209ENST00000602783 DUOX1Q9NRD9 1551 aa27.32■■□□□ 1.96
PPFIA3-209ENST00000602783 DDX58O95786 925 aaKnown RBP27.32■■□□□ 1.96
PPFIA3-209ENST00000602783 LRRC37AA6NMS7 1700 aa27.31■■□□□ 1.96
PPFIA3-209ENST00000602783 PCCAP05165 728 aaPredicted RBP27.31■■□□□ 1.96
PPFIA3-209ENST00000602783 CCDC27Q2M243 656 aa27.31■■□□□ 1.96
PPFIA3-209ENST00000602783 JARID2Q92833 1246 aaPredicted RBP27.31■■□□□ 1.96
PPFIA3-209ENST00000602783 TSR2Q969E8 191 aaKnown RBP27.31■■□□□ 1.96
PPFIA3-209ENST00000602783 AIDAQ96BJ3 306 aa27.31■■□□□ 1.96
PPFIA3-209ENST00000602783 METTL22Q9BUU2 404 aaPredicted RBP27.31■■□□□ 1.96
PPFIA3-209ENST00000602783 DBNDD1Q9H9R9 158 aa27.31■■□□□ 1.96
PPFIA3-209ENST00000602783 SEC31BQ9NQW1 1179 aa27.31■■□□□ 1.96
PPFIA3-209ENST00000602783 CWC25Q9NXE8 425 aaPredicted RBP27.31■■□□□ 1.96
PPFIA3-209ENST00000602783 CNOT7Q9UIV1 285 aaKnown RBP27.31■■□□□ 1.96
PPFIA3-209ENST00000602783 CDHR2Q9BYE9 1310 aa27.31■■□□□ 1.96
PPFIA3-209ENST00000602783 CAPN15O75808 1086 aa27.3■■□□□ 1.96
PPFIA3-209ENST00000602783 CST9Q5W186 159 aa27.3■■□□□ 1.96
PPFIA3-209ENST00000602783 WDR33Q9C0J8 1336 aaKnown RBP27.3■■□□□ 1.96
PPFIA3-209ENST00000602783 COL4A1P02462 1669 aa27.3■■□□□ 1.96
PPFIA3-209ENST00000602783 HIRAP54198 1017 aaPredicted RBP27.29■■□□□ 1.96
PPFIA3-209ENST00000602783 WWC1Q8IX03 1113 aa27.29■■□□□ 1.96
PPFIA3-209ENST00000602783 EYA3Q99504 573 aa27.29■■□□□ 1.96
PPFIA3-209ENST00000602783 MAP3K2Q9Y2U5 619 aa27.29■■□□□ 1.96
PPFIA3-209ENST00000602783 H7C1D1 291 aa27.28■■□□□ 1.96
PPFIA3-209ENST00000602783 PDE8AO60658 829 aa27.28■■□□□ 1.96
PPFIA3-209ENST00000602783 TBC1D16Q8TBP0 767 aa27.28■■□□□ 1.96
PPFIA3-209ENST00000602783 WBP1LQ9NX94 342 aa27.28■■□□□ 1.96
PPFIA3-209ENST00000602783 PGAP2Q9UHJ9 254 aa27.28■■□□□ 1.96
PPFIA3-209ENST00000602783 ZBTB12Q9Y330 459 aaPredicted RBP27.28■■□□□ 1.96
PPFIA3-209ENST00000602783 SHTN1A0MZ66 631 aa27.27■■□□□ 1.96
PPFIA3-209ENST00000602783 PSMD14O00487 310 aa27.27■■□□□ 1.96
PPFIA3-209ENST00000602783 DOK7Q18PE1 504 aa27.27■■□□□ 1.96
PPFIA3-209ENST00000602783 CCDC152Q4G0S7 254 aa27.27■■□□□ 1.96
PPFIA3-209ENST00000602783 PAXIP1Q6ZW49 1069 aaPredicted RBP27.27■■□□□ 1.96
PPFIA3-209ENST00000602783 TRPM4Q8TD43 1214 aa27.27■■□□□ 1.96
PPFIA3-209ENST00000602783 GPR101Q96P66 508 aaPredicted RBP27.27■■□□□ 1.96
PPFIA3-209ENST00000602783 CCDC85AQ96PX6 553 aaPredicted RBP27.27■■□□□ 1.96
PPFIA3-209ENST00000602783 GLIS2Q9BZE0 524 aaPredicted RBP27.27■■□□□ 1.96
PPFIA3-209ENST00000602783 CTCFP49711 727 aaPredicted RBP27.26■■□□□ 1.95
PPFIA3-209ENST00000602783 KSR2Q6VAB6 950 aa27.26■■□□□ 1.95
PPFIA3-209ENST00000602783 MICALL2Q8IY33 904 aa27.26■■□□□ 1.95
PPFIA3-209ENST00000602783 ZC3H15Q8WU90 426 aaKnown RBP27.26■■□□□ 1.95
PPFIA3-209ENST00000602783 PI4KAP2A4QPH2 592 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms