RNA–Protein interactions for RNA: ENST00000602544.5

SFXN2-206, Transcript of sideroflexin 2, humanhuman

TSL 4

Gene SFXN2, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-206ENST00000602544 CT47B1P0C2W7 299 aaPredicted RBP18.74■□□□□ 0.59
SFXN2-206ENST00000602544 IARSP41252 1262 aaKnown RBP18.74■□□□□ 0.59
SFXN2-206ENST00000602544 MPNDQ8N594 471 aa18.74■□□□□ 0.59
SFXN2-206ENST00000602544 CCDC85AQ96PX6 553 aaPredicted RBP18.74■□□□□ 0.59
SFXN2-206ENST00000602544 SMC4Q9NTJ3 1288 aa18.74■□□□□ 0.59
SFXN2-206ENST00000602544 TNRC6CQ9HCJ0 1690 aaKnown RBP18.73■□□□□ 0.59
SFXN2-206ENST00000602544 SLX4Q8IY92 1834 aa18.73■□□□□ 0.59
SFXN2-206ENST00000602544 RPS8P62241 208 aaKnown RBP18.73■□□□□ 0.59
SFXN2-206ENST00000602544 LARGE2Q8N3Y3 721 aa18.73■□□□□ 0.59
SFXN2-206ENST00000602544 MRPL50Q8N5N7 158 aaKnown RBP18.73■□□□□ 0.59
SFXN2-206ENST00000602544 SSH1Q8WYL5 1049 aa18.73■□□□□ 0.59
SFXN2-206ENST00000602544 H7C1W4 665 aa18.72■□□□□ 0.59
SFXN2-206ENST00000602544 CTSWP56202 376 aa18.72■□□□□ 0.59
SFXN2-206ENST00000602544 ALDH1L2Q3SY69 923 aa18.72■□□□□ 0.59
SFXN2-206ENST00000602544 TRMT2AQ8IZ69 625 aaKnown RBP18.72■□□□□ 0.59
SFXN2-206ENST00000602544 CELF1Q92879 486 aaKnown RBP18.72■□□□□ 0.59
SFXN2-206ENST00000602544 BCL2L13Q9BXK5 485 aa18.72■□□□□ 0.59
SFXN2-206ENST00000602544 RRAGCQ9HB90 399 aa18.72■□□□□ 0.59
SFXN2-206ENST00000602544 NMRK2Q9NPI5 230 aa18.72■□□□□ 0.59
SFXN2-206ENST00000602544 C9orf78Q9NZ63 289 aaPredicted RBP18.72■□□□□ 0.59
SFXN2-206ENST00000602544 C1QTNF8P60827 252 aa18.71■□□□□ 0.59
SFXN2-206ENST00000602544 BEND3Q5T5X7 828 aa18.71■□□□□ 0.59
SFXN2-206ENST00000602544 ANKRD18AQ8IVF6 992 aa18.71■□□□□ 0.59
SFXN2-206ENST00000602544 CDC5LQ99459 802 aaKnown RBP18.71■□□□□ 0.59
SFXN2-206ENST00000602544 SRCIN1Q9C0H9 1055 aa18.71■□□□□ 0.59
SFXN2-206ENST00000602544 PTPRCP08575 1304 aa18.71■□□□□ 0.59
SFXN2-206ENST00000602544 ANKRD36CQ5JPF3 1778 aa18.7■□□□□ 0.58
SFXN2-206ENST00000602544 PPIP5K2O43314 1243 aa18.7■□□□□ 0.58
SFXN2-206ENST00000602544 EIF6P56537 245 aaKnown RBP18.7■□□□□ 0.58
SFXN2-206ENST00000602544 NIM1KQ8IY84 436 aa18.7■□□□□ 0.58
SFXN2-206ENST00000602544 SEC31BQ9NQW1 1179 aa18.7■□□□□ 0.58
SFXN2-206ENST00000602544 NSFL1CQ9UNZ2 370 aaKnown RBP18.7■□□□□ 0.58
SFXN2-206ENST00000602544 ARFGEF2Q9Y6D5 1785 aa18.7■□□□□ 0.58
SFXN2-206ENST00000602544 KIF3CO14782 793 aa18.69■□□□□ 0.58
SFXN2-206ENST00000602544 ALDH1L1O75891 902 aa18.69■□□□□ 0.58
SFXN2-206ENST00000602544 VPS33BQ9H267 617 aa18.69■□□□□ 0.58
SFXN2-206ENST00000602544 C6orf229H3BNL8 230 aa18.68■□□□□ 0.58
SFXN2-206ENST00000602544 VEGFAP15692 232 aaPredicted RBP18.68■□□□□ 0.58
SFXN2-206ENST00000602544 TTLL11Q8NHH1 800 aa18.68■□□□□ 0.58
SFXN2-206ENST00000602544 ANKIB1Q9P2G1 1089 aa18.68■□□□□ 0.58
SFXN2-206ENST00000602544 IGHMBP2P38935 993 aaKnown RBP18.67■□□□□ 0.58
SFXN2-206ENST00000602544 AOC3Q16853 763 aa18.67■□□□□ 0.58
SFXN2-206ENST00000602544 PLA2G12BQ9BX93 195 aa18.67■□□□□ 0.58
SFXN2-206ENST00000602544 RTFDC1Q9BY42 306 aaPredicted RBP18.67■□□□□ 0.58
SFXN2-206ENST00000602544 CHMP3Q9Y3E7 222 aa18.67■□□□□ 0.58
SFXN2-206ENST00000602544 GRM8O00222 908 aa18.66■□□□□ 0.58
SFXN2-206ENST00000602544 TOMM70O94826 608 aa18.66■□□□□ 0.58
SFXN2-206ENST00000602544 DDNO94850 711 aaPredicted RBP18.66■□□□□ 0.58
SFXN2-206ENST00000602544 SLC51AQ86UW1 340 aa18.66■□□□□ 0.58
SFXN2-206ENST00000602544 EYA3Q99504 573 aa18.66■□□□□ 0.58
SFXN2-206ENST00000602544 GREM2Q9H772 168 aa18.66■□□□□ 0.58
SFXN2-206ENST00000602544 G3V3G9 751 aa18.65■□□□□ 0.58
SFXN2-206ENST00000602544 GPSM2P81274 684 aa18.65■□□□□ 0.58
SFXN2-206ENST00000602544 WASHC4Q2M389 1173 aa18.65■□□□□ 0.58
SFXN2-206ENST00000602544 DCAF8Q5TAQ9 597 aa18.65■□□□□ 0.58
SFXN2-206ENST00000602544 MPHOSPH8Q99549 860 aa18.65■□□□□ 0.58
SFXN2-206ENST00000602544 IQCA1LA6NCM1 817 aa18.64■□□□□ 0.57
SFXN2-206ENST00000602544 FZD9O00144 591 aa18.64■□□□□ 0.57
SFXN2-206ENST00000602544 ITGA6P23229 1130 aa18.64■□□□□ 0.57
SFXN2-206ENST00000602544 CASP7P55210 303 aa18.64■□□□□ 0.57
SFXN2-206ENST00000602544 GGA1Q9UJY5 639 aa18.64■□□□□ 0.57
SFXN2-206ENST00000602544 NOB1Q9ULX3 412 aaKnown RBP18.64■□□□□ 0.57
SFXN2-206ENST00000602544 GJA3Q9Y6H8 435 aa18.64■□□□□ 0.57
SFXN2-206ENST00000602544 ANKRD18BA2A2Z9 1011 aa18.63■□□□□ 0.57
SFXN2-206ENST00000602544 RARSP54136 660 aaKnown RBP18.63■□□□□ 0.57
SFXN2-206ENST00000602544 KIAA2012Q0VF49 1180 aa18.63■□□□□ 0.57
SFXN2-206ENST00000602544 TAF7LQ5H9L4 462 aa18.63■□□□□ 0.57
SFXN2-206ENST00000602544 API5Q9BZZ5 524 aaKnown RBP18.63■□□□□ 0.57
SFXN2-206ENST00000602544 ZNF541Q9H0D2 1346 aa18.63■□□□□ 0.57
SFXN2-206ENST00000602544 RIMBP2O15034 1052 aa18.62■□□□□ 0.57
SFXN2-206ENST00000602544 UFL1O94874 794 aa18.62■□□□□ 0.57
SFXN2-206ENST00000602544 IFIT5Q13325 482 aaKnown RBP18.62■□□□□ 0.57
SFXN2-206ENST00000602544 FAM161AQ3B820 660 aa18.62■□□□□ 0.57
SFXN2-206ENST00000602544 GPC2Q8N158 579 aa18.62■□□□□ 0.57
SFXN2-206ENST00000602544 RBM46Q8TBY0 533 aaKnown RBP18.62■□□□□ 0.57
SFXN2-206ENST00000602544 ZC3H12CQ9C0D7 883 aaKnown RBP18.62■□□□□ 0.57
SFXN2-206ENST00000602544 BSDC1Q9NW68 430 aaPredicted RBP18.62■□□□□ 0.57
SFXN2-206ENST00000602544 ZNRF3Q9ULT6 936 aa18.62■□□□□ 0.57
SFXN2-206ENST00000602544 CACNA1SQ13698 1873 aa18.62■□□□□ 0.57
SFXN2-206ENST00000602544 FER1L6Q2WGJ9 1857 aa18.62■□□□□ 0.57
SFXN2-206ENST00000602544 SNED1Q8TER0 1413 aa18.61■□□□□ 0.57
SFXN2-206ENST00000602544 RTL9Q8NET4 1388 aa18.61■□□□□ 0.57
SFXN2-206ENST00000602544 ZBED9Q6R2W3 1325 aa18.61■□□□□ 0.57
SFXN2-206ENST00000602544 IPO8O15397 1037 aaKnown RBP18.61■□□□□ 0.57
SFXN2-206ENST00000602544 CSF1RP07333 972 aa18.61■□□□□ 0.57
SFXN2-206ENST00000602544 LMOD1P29536 600 aaPredicted RBP18.61■□□□□ 0.57
SFXN2-206ENST00000602544 CCDC57Q2TAC2 916 aa18.61■□□□□ 0.57
SFXN2-206ENST00000602544 POLLQ9UGP5 575 aa18.61■□□□□ 0.57
SFXN2-206ENST00000602544 XDHP47989 1333 aa18.6■□□□□ 0.57
SFXN2-206ENST00000602544 KIF16BQ96L93 1317 aa18.6■□□□□ 0.57
SFXN2-206ENST00000602544 ATP2B4P23634 1241 aa18.6■□□□□ 0.57
SFXN2-206ENST00000602544 CCT4P50991 539 aaKnown RBP18.6■□□□□ 0.57
SFXN2-206ENST00000602544 LMBR1LQ6UX01 489 aa18.6■□□□□ 0.57
SFXN2-206ENST00000602544 SMC1BQ8NDV3 1235 aa18.6■□□□□ 0.57
SFXN2-206ENST00000602544 TBC1D16Q8TBP0 767 aa18.6■□□□□ 0.57
SFXN2-206ENST00000602544 PODXL2Q9NZ53 605 aa18.6■□□□□ 0.57
SFXN2-206ENST00000602544 SBF1O95248 1867 aa18.59■□□□□ 0.57
SFXN2-206ENST00000602544 BRPF1P55201 1214 aaPredicted RBP18.59■□□□□ 0.57
SFXN2-206ENST00000602544 FOXO4P98177 505 aa18.59■□□□□ 0.57
SFXN2-206ENST00000602544 TNIP1Q15025 636 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms