RNA–Protein interactions for RNA: ENST00000601809.5

IRF3-230, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-230ENST00000601809 ZNF277Q9NRM2 450 aaPredicted RBP22.4■■□□□ 1.18
IRF3-230ENST00000601809 MYH3P11055 1940 aa22.39■■□□□ 1.18
IRF3-230ENST00000601809 BBOX1O75936 387 aa22.39■■□□□ 1.17
IRF3-230ENST00000601809 FKBP5Q13451 457 aaPredicted RBP22.39■■□□□ 1.17
IRF3-230ENST00000601809 DNAAF4Q8WXU2 420 aa22.39■■□□□ 1.17
IRF3-230ENST00000601809 JARID2Q92833 1246 aaPredicted RBP22.39■■□□□ 1.17
IRF3-230ENST00000601809 H7C1W4 665 aa22.38■■□□□ 1.17
IRF3-230ENST00000601809 CASP7P55210 303 aa22.38■■□□□ 1.17
IRF3-230ENST00000601809 GRIPAP1Q4V328 841 aa22.38■■□□□ 1.17
IRF3-230ENST00000601809 DDX46Q7L014 1031 aaKnown RBP22.38■■□□□ 1.17
IRF3-230ENST00000601809 SP8Q8IXZ3 490 aa22.38■■□□□ 1.17
IRF3-230ENST00000601809 CELF1Q92879 486 aaKnown RBP22.38■■□□□ 1.17
IRF3-230ENST00000601809 KDM2BQ8NHM5 1336 aa22.37■■□□□ 1.17
IRF3-230ENST00000601809 POTECB2RU33 542 aa22.37■■□□□ 1.17
IRF3-230ENST00000601809 RTFDC1Q9BY42 306 aaPredicted RBP22.37■■□□□ 1.17
IRF3-230ENST00000601809 PDE8AO60658 829 aa22.36■■□□□ 1.17
IRF3-230ENST00000601809 IARSP41252 1262 aaKnown RBP22.36■■□□□ 1.17
IRF3-230ENST00000601809 NEXNQ0ZGT2 675 aa22.36■■□□□ 1.17
IRF3-230ENST00000601809 MRPL50Q8N5N7 158 aaKnown RBP22.36■■□□□ 1.17
IRF3-230ENST00000601809 LINS1Q8NG48 757 aa22.36■■□□□ 1.17
IRF3-230ENST00000601809 F6X3S4 739 aa22.35■■□□□ 1.17
IRF3-230ENST00000601809 GCKRQ14397 625 aa22.35■■□□□ 1.17
IRF3-230ENST00000601809 BEND3Q5T5X7 828 aa22.35■■□□□ 1.17
IRF3-230ENST00000601809 TMC4Q7Z404 712 aa22.34■■□□□ 1.17
IRF3-230ENST00000601809 SEC31BQ9NQW1 1179 aa22.34■■□□□ 1.17
IRF3-230ENST00000601809 FZD9O00144 591 aa22.33■■□□□ 1.17
IRF3-230ENST00000601809 SSH1Q8WYL5 1049 aa22.33■■□□□ 1.17
IRF3-230ENST00000601809 PLA2G12BQ9BX93 195 aa22.33■■□□□ 1.17
IRF3-230ENST00000601809 RRAGCQ9HB90 399 aa22.33■■□□□ 1.17
IRF3-230ENST00000601809 HSP90B1P14625 803 aaKnown RBP22.32■■□□□ 1.16
IRF3-230ENST00000601809 RTL9Q8NET4 1388 aa22.32■■□□□ 1.16
IRF3-230ENST00000601809 ZNF541Q9H0D2 1346 aa22.31■■□□□ 1.16
IRF3-230ENST00000601809 CTSWP56202 376 aa22.31■■□□□ 1.16
IRF3-230ENST00000601809 UBE3BQ7Z3V4 1068 aa22.31■■□□□ 1.16
IRF3-230ENST00000601809 TTLL11Q8NHH1 800 aa22.31■■□□□ 1.16
IRF3-230ENST00000601809 TOMM70O94826 608 aa22.3■■□□□ 1.16
IRF3-230ENST00000601809 DDNO94850 711 aaPredicted RBP22.3■■□□□ 1.16
IRF3-230ENST00000601809 RPS8P62241 208 aaKnown RBP22.3■■□□□ 1.16
IRF3-230ENST00000601809 CCDC152Q4G0S7 254 aa22.3■■□□□ 1.16
IRF3-230ENST00000601809 VPS33BQ9H267 617 aa22.3■■□□□ 1.16
IRF3-230ENST00000601809 ALDH1L2Q3SY69 923 aa22.29■■□□□ 1.16
IRF3-230ENST00000601809 DPY19L2Q6NUT2 758 aa22.29■■□□□ 1.16
IRF3-230ENST00000601809 MPNDQ8N594 471 aa22.29■■□□□ 1.16
IRF3-230ENST00000601809 L3MBTL3Q96JM7 780 aaPredicted RBP22.29■■□□□ 1.16
IRF3-230ENST00000601809 CT47B1P0C2W7 299 aaPredicted RBP22.28■■□□□ 1.16
IRF3-230ENST00000601809 SCN4AP35499 1836 aa22.28■■□□□ 1.16
IRF3-230ENST00000601809 SPEF2Q9C093 1822 aa22.27■■□□□ 1.16
IRF3-230ENST00000601809 CSF1RP07333 972 aa22.27■■□□□ 1.16
IRF3-230ENST00000601809 VEGFAP15692 232 aaPredicted RBP22.27■■□□□ 1.16
IRF3-230ENST00000601809 DPP8Q6V1X1 898 aaPredicted RBP22.27■■□□□ 1.16
IRF3-230ENST00000601809 BRPF1P55201 1214 aaPredicted RBP22.26■■□□□ 1.15
IRF3-230ENST00000601809 KIAA2012Q0VF49 1180 aa22.26■■□□□ 1.15
IRF3-230ENST00000601809 AOC3Q16853 763 aa22.26■■□□□ 1.15
IRF3-230ENST00000601809 RBM46Q8TBY0 533 aaKnown RBP22.26■■□□□ 1.15
IRF3-230ENST00000601809 CCDC85AQ96PX6 553 aaPredicted RBP22.26■■□□□ 1.15
IRF3-230ENST00000601809 GREM2Q9H772 168 aa22.26■■□□□ 1.15
IRF3-230ENST00000601809 PODXL2Q9NZ53 605 aa22.26■■□□□ 1.15
IRF3-230ENST00000601809 PTPRCP08575 1304 aa22.26■■□□□ 1.15
IRF3-230ENST00000601809 ALDH1L1O75891 902 aa22.25■■□□□ 1.15
IRF3-230ENST00000601809 GPSM2P81274 684 aa22.25■■□□□ 1.15
IRF3-230ENST00000601809 LARGE2Q8N3Y3 721 aa22.25■■□□□ 1.15
IRF3-230ENST00000601809 SUPT20HQ8NEM7 779 aa22.25■■□□□ 1.15
IRF3-230ENST00000601809 CEP350Q5VT06 3117 aa22.24■■□□□ 1.15
IRF3-230ENST00000601809 PPIP5K2O43314 1243 aa22.24■■□□□ 1.15
IRF3-230ENST00000601809 FOXO4P98177 505 aa22.24■■□□□ 1.15
IRF3-230ENST00000601809 JDP2Q8WYK2 163 aa22.24■■□□□ 1.15
IRF3-230ENST00000601809 BCL2L13Q9BXK5 485 aa22.24■■□□□ 1.15
IRF3-230ENST00000601809 TMX4Q9H1E5 349 aaPredicted RBP22.24■■□□□ 1.15
IRF3-230ENST00000601809 POLLQ9UGP5 575 aa22.24■■□□□ 1.15
IRF3-230ENST00000601809 ADAMTSL1Q8N6G6 1762 aa22.24■■□□□ 1.15
IRF3-230ENST00000601809 GRM8O00222 908 aa22.23■■□□□ 1.15
IRF3-230ENST00000601809 UTYO14607 1347 aa22.23■■□□□ 1.15
IRF3-230ENST00000601809 EPHA10Q5JZY3 1008 aa22.22■■□□□ 1.15
IRF3-230ENST00000601809 GPC2Q8N158 579 aa22.22■■□□□ 1.15
IRF3-230ENST00000601809 SRCIN1Q9C0H9 1055 aa22.22■■□□□ 1.15
IRF3-230ENST00000601809 A0A1B0GUL6 1792 aa22.21■■□□□ 1.15
IRF3-230ENST00000601809 ANKRD18AQ8IVF6 992 aa22.21■■□□□ 1.15
IRF3-230ENST00000601809 TBC1D16Q8TBP0 767 aa22.21■■□□□ 1.15
IRF3-230ENST00000601809 KAZALD1Q96I82 304 aa22.21■■□□□ 1.15
IRF3-230ENST00000601809 NSFL1CQ9UNZ2 370 aaKnown RBP22.21■■□□□ 1.15
IRF3-230ENST00000601809 RARSP54136 660 aaKnown RBP22.2■■□□□ 1.14
IRF3-230ENST00000601809 HNRNPUQ00839 825 aaKnown RBP eCLIP22.2■■□□□ 1.142e-8■□□□□ 8.3
IRF3-230ENST00000601809 FAM161AQ3B820 660 aa22.2■■□□□ 1.14
IRF3-230ENST00000601809 SLC4A10Q6U841 1118 aa22.2■■□□□ 1.14
IRF3-230ENST00000601809 NIM1KQ8IY84 436 aa22.2■■□□□ 1.14
IRF3-230ENST00000601809 CDC5LQ99459 802 aaKnown RBP22.2■■□□□ 1.14
IRF3-230ENST00000601809 SMC4Q9NTJ3 1288 aa22.2■■□□□ 1.14
IRF3-230ENST00000601809 BSDC1Q9NW68 430 aaPredicted RBP22.2■■□□□ 1.14
IRF3-230ENST00000601809 YDJCA8MPS7 323 aa22.19■■□□□ 1.14
IRF3-230ENST00000601809 HSPA6P17066 643 aa22.19■■□□□ 1.14
IRF3-230ENST00000601809 FSTL1Q12841 308 aa22.19■■□□□ 1.14
IRF3-230ENST00000601809 ZNRF3Q9ULT6 936 aa22.19■■□□□ 1.14
IRF3-230ENST00000601809 SCN9AQ15858 1988 aa22.18■■□□□ 1.14
IRF3-230ENST00000601809 POTEIP0CG38 1075 aa22.18■■□□□ 1.14
IRF3-230ENST00000601809 POTEJP0CG39 1038 aa22.18■■□□□ 1.14
IRF3-230ENST00000601809 ITGA6P23229 1130 aa22.18■■□□□ 1.14
IRF3-230ENST00000601809 EIF6P56537 245 aaKnown RBP22.18■■□□□ 1.14
IRF3-230ENST00000601809 CXCL9Q07325 125 aa22.18■■□□□ 1.14
IRF3-230ENST00000601809 TAF1DQ9H5J8 278 aaPredicted RBP22.18■■□□□ 1.14
IRF3-230ENST00000601809 MINPP1Q9UNW1 487 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms