RNA–Protein interactions for RNA: ENST00000601763.1

CCDC61-208, Transcript of coiled-coil domain containing 61, humanhuman

TSL 3

Gene CCDC61, Length 291 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-208ENST00000601763 PDE8AO60658 829 aa20.44■□□□□ 0.86
CCDC61-208ENST00000601763 LMNB1P20700 586 aa20.44■□□□□ 0.86
CCDC61-208ENST00000601763 GRAPQ13588 217 aa20.44■□□□□ 0.86
CCDC61-208ENST00000601763 GRAPLQ8TC17 118 aaPredicted RBP20.44■□□□□ 0.86
CCDC61-208ENST00000601763 TAOK3Q9H2K8 898 aa20.44■□□□□ 0.86
CCDC61-208ENST00000601763 ZNF277Q9NRM2 450 aaPredicted RBP20.44■□□□□ 0.86
CCDC61-208ENST00000601763 TNNQ9UQP3 1299 aa20.44■□□□□ 0.86
CCDC61-208ENST00000601763 COL4A5P29400 1685 aa20.43■□□□□ 0.86
CCDC61-208ENST00000601763 BCAR3O75815 825 aa20.43■□□□□ 0.86
CCDC61-208ENST00000601763 NOB1Q9ULX3 412 aaKnown RBP20.43■□□□□ 0.86
CCDC61-208ENST00000601763 TIAM2Q8IVF5 1701 aa20.43■□□□□ 0.86
CCDC61-208ENST00000601763 LTBP3Q9NS15 1303 aa20.43■□□□□ 0.86
CCDC61-208ENST00000601763 CTSWP56202 376 aa20.42■□□□□ 0.86
CCDC61-208ENST00000601763 FKBP4Q02790 459 aaKnown RBP eCLIP20.42■□□□□ 0.86
CCDC61-208ENST00000601763 EPHA10Q5JZY3 1008 aa20.42■□□□□ 0.86
CCDC61-208ENST00000601763 ATP6V0A2Q9Y487 856 aa20.42■□□□□ 0.86
CCDC61-208ENST00000601763 CT47B1P0C2W7 299 aaPredicted RBP20.41■□□□□ 0.86
CCDC61-208ENST00000601763 TTLL11Q8NHH1 800 aa20.41■□□□□ 0.86
CCDC61-208ENST00000601763 GREM2Q9H772 168 aa20.41■□□□□ 0.86
CCDC61-208ENST00000601763 PTPRCP08575 1304 aa20.4■□□□□ 0.86
CCDC61-208ENST00000601763 SOGA3Q5TF21 947 aa20.4■□□□□ 0.86
CCDC61-208ENST00000601763 SRCIN1Q9C0H9 1055 aa20.4■□□□□ 0.86
CCDC61-208ENST00000601763 LRRC37AA6NMS7 1700 aa20.39■□□□□ 0.86
CCDC61-208ENST00000601763 DUOX1Q9NRD9 1551 aa20.39■□□□□ 0.85
CCDC61-208ENST00000601763 BBOX1O75936 387 aa20.39■□□□□ 0.85
CCDC61-208ENST00000601763 FOXO4P98177 505 aa20.39■□□□□ 0.85
CCDC61-208ENST00000601763 RTKN2Q8IZC4 609 aa20.39■□□□□ 0.85
CCDC61-208ENST00000601763 MYH3P11055 1940 aa20.39■□□□□ 0.85
CCDC61-208ENST00000601763 DICER1Q9UPY3 1922 aaKnown RBP20.39■□□□□ 0.85
CCDC61-208ENST00000601763 NBPF7P0C2Y1 421 aaPredicted RBP20.38■□□□□ 0.85
CCDC61-208ENST00000601763 SP8Q8IXZ3 490 aa20.38■□□□□ 0.85
CCDC61-208ENST00000601763 KAZALD1Q96I82 304 aa20.38■□□□□ 0.85
CCDC61-208ENST00000601763 SPEF2Q9C093 1822 aa20.37■□□□□ 0.85
CCDC61-208ENST00000601763 WTIPA6NIX2 430 aaPredicted RBP20.37■□□□□ 0.85
CCDC61-208ENST00000601763 GRM8O00222 908 aa20.37■□□□□ 0.85
CCDC61-208ENST00000601763 ALDH1L1O75891 902 aa20.37■□□□□ 0.85
CCDC61-208ENST00000601763 BRPF1P55201 1214 aaPredicted RBP20.37■□□□□ 0.85
CCDC61-208ENST00000601763 RPS8P62241 208 aaKnown RBP20.37■□□□□ 0.85
CCDC61-208ENST00000601763 FAM161AQ3B820 660 aa20.37■□□□□ 0.85
CCDC61-208ENST00000601763 CCDC152Q4G0S7 254 aa20.37■□□□□ 0.85
CCDC61-208ENST00000601763 PLA2G12BQ9BX93 195 aa20.37■□□□□ 0.85
CCDC61-208ENST00000601763 NMRK2Q9NPI5 230 aa20.37■□□□□ 0.85
CCDC61-208ENST00000601763 IARSP41252 1262 aaKnown RBP20.36■□□□□ 0.85
CCDC61-208ENST00000601763 GPSM2P81274 684 aa20.36■□□□□ 0.85
CCDC61-208ENST00000601763 SUCLG2Q96I99 432 aa20.36■□□□□ 0.85
CCDC61-208ENST00000601763 GPR101Q96P66 508 aaPredicted RBP20.36■□□□□ 0.85
CCDC61-208ENST00000601763 PSMD1Q99460 953 aa20.36■□□□□ 0.85
CCDC61-208ENST00000601763 CSF1RP07333 972 aa20.35■□□□□ 0.85
CCDC61-208ENST00000601763 CC2D2BQ6DHV5 1058 aa20.35■□□□□ 0.85
CCDC61-208ENST00000601763 C9orf78Q9NZ63 289 aaPredicted RBP20.35■□□□□ 0.85
CCDC61-208ENST00000601763 LTBP1Q14766 1721 aa20.34■□□□□ 0.85
CCDC61-208ENST00000601763 MPNDQ8N594 471 aa20.34■□□□□ 0.85
CCDC61-208ENST00000601763 USP44Q9H0E7 712 aa20.34■□□□□ 0.85
CCDC61-208ENST00000601763 GPBP1L1Q9HC44 474 aaPredicted RBP20.34■□□□□ 0.85
CCDC61-208ENST00000601763 UTYO14607 1347 aa20.33■□□□□ 0.85
CCDC61-208ENST00000601763 ZNF541Q9H0D2 1346 aa20.33■□□□□ 0.85
CCDC61-208ENST00000601763 HSP90B1P14625 803 aaKnown RBP20.33■□□□□ 0.85
CCDC61-208ENST00000601763 AOC3Q16853 763 aa20.33■□□□□ 0.85
CCDC61-208ENST00000601763 LMBR1LQ6UX01 489 aa20.33■□□□□ 0.85
CCDC61-208ENST00000601763 DPP8Q6V1X1 898 aaPredicted RBP20.33■□□□□ 0.85
CCDC61-208ENST00000601763 FRAT1Q92837 279 aaPredicted RBP20.33■□□□□ 0.85
CCDC61-208ENST00000601763 RTFDC1Q9BY42 306 aaPredicted RBP20.33■□□□□ 0.85
CCDC61-208ENST00000601763 RTL9Q8NET4 1388 aa20.33■□□□□ 0.84
CCDC61-208ENST00000601763 ITGA6P23229 1130 aa20.32■□□□□ 0.84
CCDC61-208ENST00000601763 POLLQ9UGP5 575 aa20.32■□□□□ 0.84
CCDC61-208ENST00000601763 NSFL1CQ9UNZ2 370 aaKnown RBP20.32■□□□□ 0.84
CCDC61-208ENST00000601763 KIF3CO14782 793 aa20.31■□□□□ 0.84
CCDC61-208ENST00000601763 DDNO94850 711 aaPredicted RBP20.31■□□□□ 0.84
CCDC61-208ENST00000601763 TRIM27P14373 513 aa20.31■□□□□ 0.84
CCDC61-208ENST00000601763 ANKRD18AQ8IVF6 992 aa20.31■□□□□ 0.84
CCDC61-208ENST00000601763 GLTPD2A6NH11 291 aa20.3■□□□□ 0.84
CCDC61-208ENST00000601763 POTECB2RU33 542 aa20.3■□□□□ 0.84
CCDC61-208ENST00000601763 PPIP5K2O43314 1243 aa20.3■□□□□ 0.84
CCDC61-208ENST00000601763 ANKRD44Q8N8A2 993 aa20.3■□□□□ 0.84
CCDC61-208ENST00000601763 CLUAP1Q96AJ1 413 aa20.3■□□□□ 0.84
CCDC61-208ENST00000601763 ZNF594Q96JF6 807 aaPredicted RBP20.3■□□□□ 0.84
CCDC61-208ENST00000601763 API5Q9BZZ5 524 aaKnown RBP20.3■□□□□ 0.84
CCDC61-208ENST00000601763 RRAGCQ9HB90 399 aa20.3■□□□□ 0.84
CCDC61-208ENST00000601763 KIF16BQ96L93 1317 aa20.29■□□□□ 0.84
CCDC61-208ENST00000601763 TMC4Q7Z404 712 aa20.29■□□□□ 0.84
CCDC61-208ENST00000601763 LARGE2Q8N3Y3 721 aa20.29■□□□□ 0.84
CCDC61-208ENST00000601763 BICC1Q9H694 974 aaKnown RBP20.29■□□□□ 0.84
CCDC61-208ENST00000601763 CHMP3Q9Y3E7 222 aa20.29■□□□□ 0.84
CCDC61-208ENST00000601763 ZC3H4Q9UPT8 1303 aaKnown RBP20.28■□□□□ 0.84
CCDC61-208ENST00000601763 RIMBP2O15034 1052 aa20.28■□□□□ 0.84
CCDC61-208ENST00000601763 TBC1D16Q8TBP0 767 aa20.28■□□□□ 0.84
CCDC61-208ENST00000601763 YTHDC1Q96MU7 727 aaKnown RBP20.28■□□□□ 0.84
CCDC61-208ENST00000601763 CDC5LQ99459 802 aaKnown RBP20.28■□□□□ 0.84
CCDC61-208ENST00000601763 MINPP1Q9UNW1 487 aa20.28■□□□□ 0.84
CCDC61-208ENST00000601763 FZD9O00144 591 aa20.27■□□□□ 0.84
CCDC61-208ENST00000601763 GRIPAP1Q4V328 841 aa20.27■□□□□ 0.84
CCDC61-208ENST00000601763 ATF7IPQ6VMQ6 1270 aa20.27■□□□□ 0.84
CCDC61-208ENST00000601763 ARHGAP45Q92619 1136 aa20.27■□□□□ 0.84
CCDC61-208ENST00000601763 MEIS3Q99687 375 aa20.27■□□□□ 0.84
CCDC61-208ENST00000601763 TMX4Q9H1E5 349 aaPredicted RBP20.27■□□□□ 0.84
CCDC61-208ENST00000601763 C6orf229H3BNL8 230 aa20.26■□□□□ 0.83
CCDC61-208ENST00000601763 SNAP23O00161 211 aa20.26■□□□□ 0.83
CCDC61-208ENST00000601763 CCT4P50991 539 aaKnown RBP20.26■□□□□ 0.83
CCDC61-208ENST00000601763 KIAA2012Q0VF49 1180 aa20.26■□□□□ 0.83
CCDC61-208ENST00000601763 BSDC1Q9NW68 430 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms