RNA–Protein interactions for RNA: ENST00000601656.5

FARP1-235, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 806 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-235ENST00000601656 C5P01031 1676 aa12.63□□□□□ -0.39
FARP1-235ENST00000601656 CICQ96RK0 1608 aaPredicted RBP12.62□□□□□ -0.39
FARP1-235ENST00000601656 RDH13Q8NBN7 331 aa12.62□□□□□ -0.39
FARP1-235ENST00000601656 ZCRB1Q8TBF4 217 aaKnown RBP12.62□□□□□ -0.39
FARP1-235ENST00000601656 EPS8L1Q8TE68 723 aa12.62□□□□□ -0.39
FARP1-235ENST00000601656 TAF1LQ8IZX4 1826 aa12.62□□□□□ -0.39
FARP1-235ENST00000601656 KIAA1210Q9ULL0 1709 aa12.62□□□□□ -0.39
FARP1-235ENST00000601656 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.61□□□□□ -0.39
FARP1-235ENST00000601656 LTV1Q96GA3 475 aaPredicted RBP12.61□□□□□ -0.39
FARP1-235ENST00000601656 RRAGCQ9HB90 399 aa12.61□□□□□ -0.39
FARP1-235ENST00000601656 EVC2Q86UK5 1308 aa12.61□□□□□ -0.39
FARP1-235ENST00000601656 USP54Q70EL1 1684 aa12.61□□□□□ -0.39
FARP1-235ENST00000601656 KTN1Q86UP2 1357 aaKnown RBP12.6□□□□□ -0.39
FARP1-235ENST00000601656 EIF5BO60841 1220 aaKnown RBP12.6□□□□□ -0.39
FARP1-235ENST00000601656 SMIM5Q71RC9 77 aa12.6□□□□□ -0.39
FARP1-235ENST00000601656 SLF2Q8IX21 1173 aa12.6□□□□□ -0.39
FARP1-235ENST00000601656 N4BP2Q86UW6 1770 aaPredicted RBP12.6□□□□□ -0.39
FARP1-235ENST00000601656 GCGRP47871 477 aa12.59□□□□□ -0.39
FARP1-235ENST00000601656 C9orf131Q5VYM1 1079 aa12.59□□□□□ -0.39
FARP1-235ENST00000601656 AMIGO3Q86WK7 504 aa12.59□□□□□ -0.39
FARP1-235ENST00000601656 NPAS4Q8IUM7 802 aa12.59□□□□□ -0.39
FARP1-235ENST00000601656 ZNF454Q8N9F8 522 aa12.59□□□□□ -0.39
FARP1-235ENST00000601656 TSC1Q92574 1164 aa12.59□□□□□ -0.39
FARP1-235ENST00000601656 KDM2BQ8NHM5 1336 aa12.59□□□□□ -0.39
FARP1-235ENST00000601656 A0A0G2JLW4 131 aa12.58□□□□□ -0.4
FARP1-235ENST00000601656 FAM196BA6NMK8 535 aa12.58□□□□□ -0.4
FARP1-235ENST00000601656 PSEN2P49810 448 aa12.58□□□□□ -0.4
FARP1-235ENST00000601656 TGFB2P61812 414 aa12.58□□□□□ -0.4
FARP1-235ENST00000601656 PLEKHM2Q8IWE5 1019 aa12.58□□□□□ -0.4
FARP1-235ENST00000601656 SMC1BQ8NDV3 1235 aa12.58□□□□□ -0.4
FARP1-235ENST00000601656 CLP1Q92989 425 aaKnown RBP12.58□□□□□ -0.4
FARP1-235ENST00000601656 ADAM33Q9BZ11 813 aa12.58□□□□□ -0.4
FARP1-235ENST00000601656 USP31Q70CQ4 1352 aa12.57□□□□□ -0.4
FARP1-235ENST00000601656 ANKRD33BA6NCL7 494 aa12.57□□□□□ -0.4
FARP1-235ENST00000601656 NME9Q86XW9 330 aa12.57□□□□□ -0.4
FARP1-235ENST00000601656 IP6K1Q92551 441 aa12.57□□□□□ -0.4
FARP1-235ENST00000601656 SPATA32Q96LK8 384 aa12.57□□□□□ -0.4
FARP1-235ENST00000601656 UBR3Q6ZT12 1888 aa12.57□□□□□ -0.4
FARP1-235ENST00000601656 USP17L3A6NCW0 530 aa12.56□□□□□ -0.4
FARP1-235ENST00000601656 USP17L4A6NCW7 530 aa12.56□□□□□ -0.4
FARP1-235ENST00000601656 CFAP99D6REC4 459 aa12.56□□□□□ -0.4
FARP1-235ENST00000601656 USP17L2Q6R6M4 530 aa12.56□□□□□ -0.4
FARP1-235ENST00000601656 NUDT18Q6ZVK8 323 aa12.56□□□□□ -0.4
FARP1-235ENST00000601656 USP17L1Q7RTZ2 530 aa12.56□□□□□ -0.4
FARP1-235ENST00000601656 C4BP0C0L5 1744 aa12.56□□□□□ -0.4
FARP1-235ENST00000601656 KCPQ6ZWJ8 1503 aa12.56□□□□□ -0.4
FARP1-235ENST00000601656 PXDNLA1KZ92 1463 aa12.55□□□□□ -0.4
FARP1-235ENST00000601656 PPM1GO15355 546 aaPredicted RBP12.55□□□□□ -0.4
FARP1-235ENST00000601656 DMRTA1Q5VZB9 504 aa12.55□□□□□ -0.4
FARP1-235ENST00000601656 MPRIPQ6WCQ1 1025 aa12.55□□□□□ -0.4
FARP1-235ENST00000601656 KCNK17Q96T54 332 aa12.55□□□□□ -0.4
FARP1-235ENST00000601656 CHMP4AQ9BY43 222 aa12.55□□□□□ -0.4
FARP1-235ENST00000601656 BCL2L12Q9HB09 334 aa12.55□□□□□ -0.4
FARP1-235ENST00000601656 HCSTQ9UBK5 93 aa12.55□□□□□ -0.4
FARP1-235ENST00000601656 KIF13BQ9NQT8 1826 aa12.55□□□□□ -0.4
FARP1-235ENST00000601656 PALLDQ8WX93 1383 aa12.55□□□□□ -0.4
FARP1-235ENST00000601656 PLEKHG2Q9H7P9 1386 aa12.55□□□□□ -0.4
FARP1-235ENST00000601656 KIAA1551Q9HCM1 1747 aa12.54□□□□□ -0.4
FARP1-235ENST00000601656 TOGARAM1Q9Y4F4 1720 aa12.54□□□□□ -0.4
FARP1-235ENST00000601656 RGPD2P0DJD1 1756 aa12.54□□□□□ -0.4
FARP1-235ENST00000601656 NBPF26B4DH59 902 aa12.54□□□□□ -0.4
FARP1-235ENST00000601656 MMP10P09238 476 aa12.54□□□□□ -0.4
FARP1-235ENST00000601656 SERPINB4P48594 390 aa12.54□□□□□ -0.4
FARP1-235ENST00000601656 NR6A1Q15406 480 aa12.54□□□□□ -0.4
FARP1-235ENST00000601656 UBXN4Q92575 508 aa12.54□□□□□ -0.4
FARP1-235ENST00000601656 BIN2Q9UBW5 565 aaPredicted RBP12.54□□□□□ -0.4
FARP1-235ENST00000601656 FAM208AQ9UK61 1670 aaKnown RBP12.54□□□□□ -0.4
FARP1-235ENST00000601656 USP17L15C9J2P7 530 aa12.53□□□□□ -0.4
FARP1-235ENST00000601656 USP17L10C9JJH3 530 aa12.53□□□□□ -0.4
FARP1-235ENST00000601656 USP17L13C9JLJ4 530 aa12.53□□□□□ -0.4
FARP1-235ENST00000601656 USP17L12C9JPN9 530 aa12.53□□□□□ -0.4
FARP1-235ENST00000601656 USP17L11C9JVI0 530 aa12.53□□□□□ -0.4
FARP1-235ENST00000601656 USP17L21D6R901 530 aa12.53□□□□□ -0.4
FARP1-235ENST00000601656 USP17L18D6R9N7 530 aa12.53□□□□□ -0.4
FARP1-235ENST00000601656 USP17L22D6RA61 530 aa12.53□□□□□ -0.4
FARP1-235ENST00000601656 USP17L17D6RBQ6 530 aa12.53□□□□□ -0.4
FARP1-235ENST00000601656 USP17L19D6RCP7 530 aa12.53□□□□□ -0.4
FARP1-235ENST00000601656 USP17L20D6RJB6 530 aa12.53□□□□□ -0.4
FARP1-235ENST00000601656 HRO43593 1189 aa12.53□□□□□ -0.4
FARP1-235ENST00000601656 DPEP1P16444 411 aa12.53□□□□□ -0.4
FARP1-235ENST00000601656 USP17L24Q0WX57 530 aa12.53□□□□□ -0.4
FARP1-235ENST00000601656 NR1H3Q13133 447 aa12.53□□□□□ -0.4
FARP1-235ENST00000601656 C10orf71Q711Q0 1435 aa12.53□□□□□ -0.4
FARP1-235ENST00000601656 NSD3Q9BZ95 1437 aa12.53□□□□□ -0.4
FARP1-235ENST00000601656 MON2Q7Z3U7 1717 aa12.52□□□□□ -0.41
FARP1-235ENST00000601656 PKD1L3Q7Z443 1732 aa12.52□□□□□ -0.41
FARP1-235ENST00000601656 PIK3CDO00329 1044 aa12.52□□□□□ -0.41
FARP1-235ENST00000601656 SMARCA5O60264 1052 aaPredicted RBP12.52□□□□□ -0.41
FARP1-235ENST00000601656 GUCA2AQ02747 115 aa12.52□□□□□ -0.41
FARP1-235ENST00000601656 SMARCC1Q92922 1105 aaPredicted RBP12.52□□□□□ -0.41
FARP1-235ENST00000601656 RNF181Q9P0P0 153 aa12.52□□□□□ -0.41
FARP1-235ENST00000601656 TSKSQ9UJT2 592 aa12.52□□□□□ -0.41
FARP1-235ENST00000601656 TNRC6CQ9HCJ0 1690 aaKnown RBP12.51□□□□□ -0.41
FARP1-235ENST00000601656 USP17L5A8MUK1 530 aa12.51□□□□□ -0.41
FARP1-235ENST00000601656 PTPREP23469 700 aa12.51□□□□□ -0.41
FARP1-235ENST00000601656 SF3A1Q15459 793 aaKnown RBP12.51□□□□□ -0.41
FARP1-235ENST00000601656 FAM200AQ8TCP9 573 aa12.51□□□□□ -0.41
FARP1-235ENST00000601656 MEGF6O75095 1541 aa12.51□□□□□ -0.41
FARP1-235ENST00000601656 ARFGEF1Q9Y6D6 1849 aa12.51□□□□□ -0.41
FARP1-235ENST00000601656 SBF1O95248 1867 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms