RNA–Protein interactions for RNA: ENST00000601393.1

SNRPA-210, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-210ENST00000601393 BEND3Q5T5X7 828 aa21.41■■□□□ 1.02
SNRPA-210ENST00000601393 RTKN2Q8IZC4 609 aa21.41■■□□□ 1.02
SNRPA-210ENST00000601393 GRAPLQ8TC17 118 aaPredicted RBP21.41■■□□□ 1.02
SNRPA-210ENST00000601393 JARID2Q92833 1246 aaPredicted RBP21.41■■□□□ 1.02
SNRPA-210ENST00000601393 ATP6V0A2Q9Y487 856 aa21.41■■□□□ 1.02
SNRPA-210ENST00000601393 COL4A5P29400 1685 aa21.4■■□□□ 1.02
SNRPA-210ENST00000601393 HNRNPUQ00839 825 aaKnown RBP eCLIP21.4■■□□□ 1.02
SNRPA-210ENST00000601393 ALDH1L2Q3SY69 923 aa21.4■■□□□ 1.02
SNRPA-210ENST00000601393 DDX46Q7L014 1031 aaKnown RBP21.4■■□□□ 1.02
SNRPA-210ENST00000601393 PSMD1Q99460 953 aa21.4■■□□□ 1.02
SNRPA-210ENST00000601393 SPEF2Q9C093 1822 aa21.39■■□□□ 1.02
SNRPA-210ENST00000601393 PDE8AO60658 829 aa21.39■■□□□ 1.01
SNRPA-210ENST00000601393 BBOX1O75936 387 aa21.39■■□□□ 1.01
SNRPA-210ENST00000601393 HSP90B1P14625 803 aaKnown RBP21.38■■□□□ 1.01
SNRPA-210ENST00000601393 GRIPAP1Q4V328 841 aa21.38■■□□□ 1.01
SNRPA-210ENST00000601393 CELF1Q92879 486 aaKnown RBP21.38■■□□□ 1.01
SNRPA-210ENST00000601393 WDR90Q96KV7 1748 aa21.38■■□□□ 1.01
SNRPA-210ENST00000601393 PTPRCP08575 1304 aa21.37■■□□□ 1.01
SNRPA-210ENST00000601393 SP8Q8IXZ3 490 aa21.37■■□□□ 1.01
SNRPA-210ENST00000601393 GPBP1L1Q9HC44 474 aaPredicted RBP21.37■■□□□ 1.01
SNRPA-210ENST00000601393 RTL9Q8NET4 1388 aa21.36■■□□□ 1.01
SNRPA-210ENST00000601393 ZBED9Q6R2W3 1325 aa21.36■■□□□ 1.01
SNRPA-210ENST00000601393 BRPF1P55201 1214 aaPredicted RBP21.36■■□□□ 1.01
SNRPA-210ENST00000601393 UBE3BQ7Z3V4 1068 aa21.36■■□□□ 1.01
SNRPA-210ENST00000601393 TMC4Q7Z404 712 aa21.36■■□□□ 1.01
SNRPA-210ENST00000601393 ZNF526Q8TF50 670 aaPredicted RBP21.36■■□□□ 1.01
SNRPA-210ENST00000601393 PLA2G12BQ9BX93 195 aa21.36■■□□□ 1.01
SNRPA-210ENST00000601393 CTSWP56202 376 aa21.35■■□□□ 1.01
SNRPA-210ENST00000601393 BCL2L13Q9BXK5 485 aa21.35■■□□□ 1.01
SNRPA-210ENST00000601393 SEC31BQ9NQW1 1179 aa21.35■■□□□ 1.01
SNRPA-210ENST00000601393 ZNF277Q9NRM2 450 aaPredicted RBP21.35■■□□□ 1.01
SNRPA-210ENST00000601393 CCDC152Q4G0S7 254 aa21.34■■□□□ 1.01
SNRPA-210ENST00000601393 TTLL11Q8NHH1 800 aa21.34■■□□□ 1.01
SNRPA-210ENST00000601393 RTFDC1Q9BY42 306 aaPredicted RBP21.34■■□□□ 1.01
SNRPA-210ENST00000601393 A0A1B0GUL6 1792 aa21.33■■□□□ 1.01
SNRPA-210ENST00000601393 KIF3CO14782 793 aa21.33■■□□□ 1.01
SNRPA-210ENST00000601393 ALDH1L1O75891 902 aa21.33■■□□□ 1.01
SNRPA-210ENST00000601393 IARSP41252 1262 aaKnown RBP21.33■■□□□ 1.01
SNRPA-210ENST00000601393 SMC4Q9NTJ3 1288 aa21.33■■□□□ 1.01
SNRPA-210ENST00000601393 GLTPD2A6NH11 291 aa21.32■■□□□ 1
SNRPA-210ENST00000601393 RARSP54136 660 aaKnown RBP21.32■■□□□ 1
SNRPA-210ENST00000601393 RPS8P62241 208 aaKnown RBP21.31■■□□□ 1
SNRPA-210ENST00000601393 NMRK2Q9NPI5 230 aa21.31■■□□□ 1
SNRPA-210ENST00000601393 KDM2BQ8NHM5 1336 aa21.3■■□□□ 1
SNRPA-210ENST00000601393 CSF1RP07333 972 aa21.3■■□□□ 1
SNRPA-210ENST00000601393 SLC4A10Q6U841 1118 aa21.3■■□□□ 1
SNRPA-210ENST00000601393 CCDC85AQ96PX6 553 aaPredicted RBP21.3■■□□□ 1
SNRPA-210ENST00000601393 SRCIN1Q9C0H9 1055 aa21.3■■□□□ 1
SNRPA-210ENST00000601393 GREM2Q9H772 168 aa21.3■■□□□ 1
SNRPA-210ENST00000601393 UTYO14607 1347 aa21.29■■□□□ 1
SNRPA-210ENST00000601393 GRM8O00222 908 aa21.29■■□□□ 1
SNRPA-210ENST00000601393 MPNDQ8N594 471 aa21.29■■□□□ 1
SNRPA-210ENST00000601393 SCN4AP35499 1836 aa21.29■■□□□ 1
SNRPA-210ENST00000601393 FZD9O00144 591 aa21.28■■□□□ 1
SNRPA-210ENST00000601393 FOXO4P98177 505 aa21.28■■□□□ 1
SNRPA-210ENST00000601393 DPP8Q6V1X1 898 aaPredicted RBP21.28■■□□□ 1
SNRPA-210ENST00000601393 VPS33BQ9H267 617 aa21.28■■□□□ 1
SNRPA-210ENST00000601393 ZNF541Q9H0D2 1346 aa21.28■■□□□ 1
SNRPA-210ENST00000601393 TMX4Q9H1E5 349 aaPredicted RBP21.27■■□□□ 1
SNRPA-210ENST00000601393 POTECB2RU33 542 aa21.26■□□□□ 0.99
SNRPA-210ENST00000601393 GPSM2P81274 684 aa21.26■□□□□ 0.99
SNRPA-210ENST00000601393 FAM161AQ3B820 660 aa21.26■□□□□ 0.99
SNRPA-210ENST00000601393 EPHA10Q5JZY3 1008 aa21.26■□□□□ 0.99
SNRPA-210ENST00000601393 SUPT20HQ8NEM7 779 aa21.26■□□□□ 0.99
SNRPA-210ENST00000601393 KAZALD1Q96I82 304 aa21.26■□□□□ 0.99
SNRPA-210ENST00000601393 NOB1Q9ULX3 412 aaKnown RBP21.26■□□□□ 0.99
SNRPA-210ENST00000601393 KIAA2012Q0VF49 1180 aa21.25■□□□□ 0.99
SNRPA-210ENST00000601393 ANKRD18AQ8IVF6 992 aa21.25■□□□□ 0.99
SNRPA-210ENST00000601393 CDC5LQ99459 802 aaKnown RBP21.25■□□□□ 0.99
SNRPA-210ENST00000601393 PODXL2Q9NZ53 605 aa21.25■□□□□ 0.99
SNRPA-210ENST00000601393 PPIP5K2O43314 1243 aa21.24■□□□□ 0.99
SNRPA-210ENST00000601393 NBPF7P0C2Y1 421 aaPredicted RBP21.24■□□□□ 0.99
SNRPA-210ENST00000601393 C1QTNF8P60827 252 aa21.24■□□□□ 0.99
SNRPA-210ENST00000601393 AOC3Q16853 763 aa21.24■□□□□ 0.99
SNRPA-210ENST00000601393 POLLQ9UGP5 575 aa21.24■□□□□ 0.99
SNRPA-210ENST00000601393 PSME4Q14997 1843 aa21.24■□□□□ 0.99
SNRPA-210ENST00000601393 KIF16BQ96L93 1317 aa21.24■□□□□ 0.99
SNRPA-210ENST00000601393 DDNO94850 711 aaPredicted RBP21.23■□□□□ 0.99
SNRPA-210ENST00000601393 ITGA6P23229 1130 aa21.23■□□□□ 0.99
SNRPA-210ENST00000601393 DPY19L2Q6NUT2 758 aa21.23■□□□□ 0.99
SNRPA-210ENST00000601393 LARGE2Q8N3Y3 721 aa21.23■□□□□ 0.99
SNRPA-210ENST00000601393 ARHGAP45Q92619 1136 aa21.23■□□□□ 0.99
SNRPA-210ENST00000601393 L3MBTL3Q96JM7 780 aaPredicted RBP21.23■□□□□ 0.99
SNRPA-210ENST00000601393 RRAGCQ9HB90 399 aa21.23■□□□□ 0.99
SNRPA-210ENST00000601393 BSDC1Q9NW68 430 aaPredicted RBP21.23■□□□□ 0.99
SNRPA-210ENST00000601393 C9orf78Q9NZ63 289 aaPredicted RBP21.23■□□□□ 0.99
SNRPA-210ENST00000601393 NSFL1CQ9UNZ2 370 aaKnown RBP21.23■□□□□ 0.99
SNRPA-210ENST00000601393 SCN9AQ15858 1988 aa21.23■□□□□ 0.99
SNRPA-210ENST00000601393 TBC1D16Q8TBP0 767 aa21.22■□□□□ 0.99
SNRPA-210ENST00000601393 JDP2Q8WYK2 163 aa21.22■□□□□ 0.99
SNRPA-210ENST00000601393 SUCLG2Q96I99 432 aa21.22■□□□□ 0.99
SNRPA-210ENST00000601393 API5Q9BZZ5 524 aaKnown RBP21.22■□□□□ 0.99
SNRPA-210ENST00000601393 USP44Q9H0E7 712 aa21.22■□□□□ 0.99
SNRPA-210ENST00000601393 ZNF646O15015 1829 aaPredicted RBP21.22■□□□□ 0.99
SNRPA-210ENST00000601393 ADAMTSL1Q8N6G6 1762 aa21.21■□□□□ 0.99
SNRPA-210ENST00000601393 BCAR3O75815 825 aa21.2■□□□□ 0.98
SNRPA-210ENST00000601393 VEGFAP15692 232 aaPredicted RBP21.2■□□□□ 0.98
SNRPA-210ENST00000601393 RABL6Q3YEC7 729 aaPredicted RBP21.2■□□□□ 0.98
SNRPA-210ENST00000601393 LMBR1LQ6UX01 489 aa21.2■□□□□ 0.98
SNRPA-210ENST00000601393 NIM1KQ8IY84 436 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms