RNA–Protein interactions for RNA: ENST00000601222.1

SIPA1L3-211, Transcript of signal induced proliferation associated 1 like 3, human

TSL 4

Gene SIPA1L3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIPA1L3-211	ENST00000601222	TMC4	Q7Z404	712 aa		11.68	□□□□□ -0.54
SIPA1L3-211	ENST00000601222	TRMT2A	Q8IZ69	625 aa	Known RBP	11.68	□□□□□ -0.54
SIPA1L3-211	ENST00000601222	TMX4	Q9H1E5	349 aa	Predicted RBP	11.68	□□□□□ -0.54
SIPA1L3-211	ENST00000601222	LRRC37A	A6NMS7	1700 aa		11.67	□□□□□ -0.54
SIPA1L3-211	ENST00000601222	PDE8A	O60658	829 aa		11.67	□□□□□ -0.54
SIPA1L3-211	ENST00000601222	IARS	P41252	1262 aa	Known RBP	11.67	□□□□□ -0.54
SIPA1L3-211	ENST00000601222	CWF19L2	Q2TBE0	894 aa	Known RBP	11.67	□□□□□ -0.54
SIPA1L3-211	ENST00000601222	DPY19L2	Q6NUT2	758 aa		11.67	□□□□□ -0.54
SIPA1L3-211	ENST00000601222	SLC51A	Q86UW1	340 aa		11.67	□□□□□ -0.54
SIPA1L3-211	ENST00000601222	SP8	Q8IXZ3	490 aa		11.67	□□□□□ -0.54
SIPA1L3-211	ENST00000601222	LINS1	Q8NG48	757 aa		11.67	□□□□□ -0.54
SIPA1L3-211	ENST00000601222	JARID2	Q92833	1246 aa	Predicted RBP	11.67	□□□□□ -0.54
SIPA1L3-211	ENST00000601222	CDCA7L	Q96GN5	454 aa		11.67	□□□□□ -0.54
SIPA1L3-211	ENST00000601222	WDR90	Q96KV7	1748 aa		11.66	□□□□□ -0.54
SIPA1L3-211	ENST00000601222	GCKR	Q14397	625 aa		11.66	□□□□□ -0.54
SIPA1L3-211	ENST00000601222	CCDC152	Q4G0S7	254 aa		11.66	□□□□□ -0.54
SIPA1L3-211	ENST00000601222	RRAGC	Q9HB90	399 aa		11.66	□□□□□ -0.54
SIPA1L3-211	ENST00000601222		F6X3S4	739 aa		11.65	□□□□□ -0.54
SIPA1L3-211	ENST00000601222		H7C1W4	665 aa		11.65	□□□□□ -0.54
SIPA1L3-211	ENST00000601222	RPS8	P62241	208 aa	Known RBP	11.65	□□□□□ -0.54
SIPA1L3-211	ENST00000601222	CELF1	Q92879	486 aa	Known RBP	11.65	□□□□□ -0.54
SIPA1L3-211	ENST00000601222	RTFDC1	Q9BY42	306 aa	Predicted RBP	11.65	□□□□□ -0.54
SIPA1L3-211	ENST00000601222	VPS33B	Q9H267	617 aa		11.65	□□□□□ -0.54
SIPA1L3-211	ENST00000601222	CEP350	Q5VT06	3117 aa		11.65	□□□□□ -0.54
SIPA1L3-211	ENST00000601222	COL4A1	P02462	1669 aa		11.65	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	FZD9	O00144	591 aa		11.64	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	TOMM70	O94826	608 aa		11.64	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	CT47B1	P0C2W7	299 aa	Predicted RBP	11.64	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	VEGFA	P15692	232 aa	Predicted RBP	11.64	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	CTSW	P56202	376 aa		11.64	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	BEND3	Q5T5X7	828 aa		11.64	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	DPP8	Q6V1X1	898 aa	Predicted RBP	11.64	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	UBE3B	Q7Z3V4	1068 aa		11.64	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	C16orf71	Q8IYS4	520 aa	Predicted RBP	11.64	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	MPND	Q8N594	471 aa		11.64	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	MRPL50	Q8N5N7	158 aa	Known RBP	11.64	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	SUPT20H	Q8NEM7	779 aa		11.64	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	JDP2	Q8WYK2	163 aa		11.64	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	PLA2G12B	Q9BX93	195 aa		11.64	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	SEC31B	Q9NQW1	1179 aa		11.64	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	SCN4A	P35499	1836 aa		11.64	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	COL4A5	P29400	1685 aa		11.64	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	POTEC	B2RU33	542 aa		11.63	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	DDN	O94850	711 aa	Predicted RBP	11.63	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	CASP7	P55210	303 aa		11.63	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	ALDH1L2	Q3SY69	923 aa		11.63	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	LARGE2	Q8N3Y3	721 aa		11.63	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	TTLL11	Q8NHH1	800 aa		11.63	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	RBM46	Q8TBY0	533 aa	Known RBP	11.63	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	SSH1	Q8WYL5	1049 aa		11.63	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	RTL9	Q8NET4	1388 aa		11.63	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	LTBP1	Q14766	1721 aa		11.63	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	DUOX1	Q9NRD9	1551 aa		11.62	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	PTPRC	P08575	1304 aa		11.62	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	ZNF541	Q9H0D2	1346 aa		11.62	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	PPIP5K2	O43314	1243 aa		11.62	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	AOC3	Q16853	763 aa		11.62	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.62	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	SPEF2	Q9C093	1822 aa		11.61	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	ALDH1L1	O75891	902 aa		11.61	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	KIAA2012	Q0VF49	1180 aa		11.61	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	SLC4A10	Q6U841	1118 aa		11.61	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	ANKRD18A	Q8IVF6	992 aa		11.61	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	NIM1K	Q8IY84	436 aa		11.61	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.61	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	CDC5L	Q99459	802 aa	Known RBP	11.61	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	SRCIN1	Q9C0H9	1055 aa		11.61	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	GREM2	Q9H772	168 aa		11.61	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.61	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	CSF1R	P07333	972 aa		11.6	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	EIF6	P56537	245 aa	Known RBP	11.6	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	GPSM2	P81274	684 aa		11.6	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	FSTL1	Q12841	308 aa		11.6	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	GPC2	Q8N158	579 aa		11.6	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	BCL2L13	Q9BXK5	485 aa		11.6	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	PODXL2	Q9NZ53	605 aa		11.6	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	IQCA1L	A6NCM1	817 aa		11.59	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	GRM8	O00222	908 aa		11.59	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	HSPA6	P17066	643 aa		11.59	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	BRPF1	P55201	1214 aa	Predicted RBP	11.59	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	HNRNPU	Q00839	825 aa	Known RBP eCLIP	11.59	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	SMC4	Q9NTJ3	1288 aa		11.59	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	BSDC1	Q9NW68	430 aa	Predicted RBP	11.59	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.59	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	POLL	Q9UGP5	575 aa		11.59	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	ZNRF3	Q9ULT6	936 aa		11.59	□□□□□ -0.55
SIPA1L3-211	ENST00000601222	C6orf229	H3BNL8	230 aa		11.58	□□□□□ -0.56
SIPA1L3-211	ENST00000601222	ITGA6	P23229	1130 aa		11.58	□□□□□ -0.56
SIPA1L3-211	ENST00000601222	FOXO4	P98177	505 aa		11.58	□□□□□ -0.56
SIPA1L3-211	ENST00000601222	WASHC4	Q2M389	1173 aa		11.58	□□□□□ -0.56
SIPA1L3-211	ENST00000601222	FAM161A	Q3B820	660 aa		11.58	□□□□□ -0.56
SIPA1L3-211	ENST00000601222	SMC1B	Q8NDV3	1235 aa		11.58	□□□□□ -0.56
SIPA1L3-211	ENST00000601222	TBC1D16	Q8TBP0	767 aa		11.58	□□□□□ -0.56
SIPA1L3-211	ENST00000601222	EYA3	Q99504	573 aa		11.58	□□□□□ -0.56
SIPA1L3-211	ENST00000601222	ANKIB1	Q9P2G1	1089 aa		11.58	□□□□□ -0.56
SIPA1L3-211	ENST00000601222	IGHMBP2	P38935	993 aa	Known RBP	11.57	□□□□□ -0.56
SIPA1L3-211	ENST00000601222	RARS	P54136	660 aa	Known RBP	11.57	□□□□□ -0.56
SIPA1L3-211	ENST00000601222	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.57	□□□□□ -0.56
SIPA1L3-211	ENST00000601222	HACL1	Q9UJ83	578 aa		11.57	□□□□□ -0.56
SIPA1L3-211	ENST00000601222	GGA1	Q9UJY5	639 aa		11.57	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms