RNA–Protein interactions for RNA: ENST00000601194.1

PSMC4-205, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 3

Gene PSMC4, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-205ENST00000601194 BBOX1O75936 387 aa18.16■□□□□ 0.5
PSMC4-205ENST00000601194 FKBP4Q02790 459 aaKnown RBP eCLIP18.16■□□□□ 0.5
PSMC4-205ENST00000601194 UBE3BQ7Z3V4 1068 aa18.16■□□□□ 0.5
PSMC4-205ENST00000601194 SMC4Q9NTJ3 1288 aa18.16■□□□□ 0.5
PSMC4-205ENST00000601194 ATP6V0A2Q9Y487 856 aa18.16■□□□□ 0.5
PSMC4-205ENST00000601194 ZC3H4Q9UPT8 1303 aaKnown RBP18.16■□□□□ 0.5
PSMC4-205ENST00000601194 CASP7P55210 303 aa18.15■□□□□ 0.5
PSMC4-205ENST00000601194 COL4A1P02462 1669 aa18.15■□□□□ 0.5
PSMC4-205ENST00000601194 CTSWP56202 376 aa18.14■□□□□ 0.49
PSMC4-205ENST00000601194 CCDC152Q4G0S7 254 aa18.14■□□□□ 0.49
PSMC4-205ENST00000601194 GRIPAP1Q4V328 841 aa18.14■□□□□ 0.49
PSMC4-205ENST00000601194 ZNF526Q8TF50 670 aaPredicted RBP18.14■□□□□ 0.49
PSMC4-205ENST00000601194 CELF1Q92879 486 aaKnown RBP18.14■□□□□ 0.49
PSMC4-205ENST00000601194 PSMD1Q99460 953 aa18.14■□□□□ 0.49
PSMC4-205ENST00000601194 RARSP54136 660 aaKnown RBP18.13■□□□□ 0.49
PSMC4-205ENST00000601194 BRPF1P55201 1214 aaPredicted RBP18.13■□□□□ 0.49
PSMC4-205ENST00000601194 SLC4A10Q6U841 1118 aa18.13■□□□□ 0.49
PSMC4-205ENST00000601194 TMC4Q7Z404 712 aa18.13■□□□□ 0.49
PSMC4-205ENST00000601194 SP8Q8IXZ3 490 aa18.13■□□□□ 0.49
PSMC4-205ENST00000601194 PLA2G12BQ9BX93 195 aa18.13■□□□□ 0.49
PSMC4-205ENST00000601194 ZNF277Q9NRM2 450 aaPredicted RBP18.13■□□□□ 0.49
PSMC4-205ENST00000601194 TIAM2Q8IVF5 1701 aa18.12■□□□□ 0.49
PSMC4-205ENST00000601194 ALDH1L1O75891 902 aa18.12■□□□□ 0.49
PSMC4-205ENST00000601194 TTLL11Q8NHH1 800 aa18.12■□□□□ 0.49
PSMC4-205ENST00000601194 SRCIN1Q9C0H9 1055 aa18.12■□□□□ 0.49
PSMC4-205ENST00000601194 GPBP1L1Q9HC44 474 aaPredicted RBP18.12■□□□□ 0.49
PSMC4-205ENST00000601194 SEC31BQ9NQW1 1179 aa18.12■□□□□ 0.49
PSMC4-205ENST00000601194 TAF1P21675 1872 aa18.12■□□□□ 0.49
PSMC4-205ENST00000601194 GRM8O00222 908 aa18.11■□□□□ 0.49
PSMC4-205ENST00000601194 CCDC85AQ96PX6 553 aaPredicted RBP18.11■□□□□ 0.49
PSMC4-205ENST00000601194 TMX4Q9H1E5 349 aaPredicted RBP18.11■□□□□ 0.49
PSMC4-205ENST00000601194 RTL9Q8NET4 1388 aa18.11■□□□□ 0.49
PSMC4-205ENST00000601194 LRRC37AA6NMS7 1700 aa18.11■□□□□ 0.49
PSMC4-205ENST00000601194 CCDC88AQ3V6T2 1871 aa18.1■□□□□ 0.49
PSMC4-205ENST00000601194 IARSP41252 1262 aaKnown RBP18.1■□□□□ 0.49
PSMC4-205ENST00000601194 RPS8P62241 208 aaKnown RBP18.1■□□□□ 0.49
PSMC4-205ENST00000601194 RTFDC1Q9BY42 306 aaPredicted RBP18.09■□□□□ 0.49
PSMC4-205ENST00000601194 GREM2Q9H772 168 aa18.09■□□□□ 0.49
PSMC4-205ENST00000601194 NOB1Q9ULX3 412 aaKnown RBP18.09■□□□□ 0.49
PSMC4-205ENST00000601194 DICER1Q9UPY3 1922 aaKnown RBP18.09■□□□□ 0.49
PSMC4-205ENST00000601194 KDM2BQ8NHM5 1336 aa18.08■□□□□ 0.49
PSMC4-205ENST00000601194 DPP8Q6V1X1 898 aaPredicted RBP18.08■□□□□ 0.48
PSMC4-205ENST00000601194 MPNDQ8N594 471 aa18.08■□□□□ 0.48
PSMC4-205ENST00000601194 C9orf78Q9NZ63 289 aaPredicted RBP18.08■□□□□ 0.48
PSMC4-205ENST00000601194 DUOX1Q9NRD9 1551 aa18.08■□□□□ 0.48
PSMC4-205ENST00000601194 MYH3P11055 1940 aa18.08■□□□□ 0.48
PSMC4-205ENST00000601194 UTYO14607 1347 aa18.07■□□□□ 0.48
PSMC4-205ENST00000601194 KIF16BQ96L93 1317 aa18.07■□□□□ 0.48
PSMC4-205ENST00000601194 COL4A5P29400 1685 aa18.07■□□□□ 0.48
PSMC4-205ENST00000601194 CSF1RP07333 972 aa18.07■□□□□ 0.48
PSMC4-205ENST00000601194 CDC5LQ99459 802 aaKnown RBP18.07■□□□□ 0.48
PSMC4-205ENST00000601194 GLTPD2A6NH11 291 aa18.06■□□□□ 0.48
PSMC4-205ENST00000601194 FOXO4P98177 505 aa18.06■□□□□ 0.48
PSMC4-205ENST00000601194 FAM161AQ3B820 660 aa18.06■□□□□ 0.48
PSMC4-205ENST00000601194 ANKRD18AQ8IVF6 992 aa18.06■□□□□ 0.48
PSMC4-205ENST00000601194 NMRK2Q9NPI5 230 aa18.06■□□□□ 0.48
PSMC4-205ENST00000601194 NBPF7P0C2Y1 421 aaPredicted RBP18.05■□□□□ 0.48
PSMC4-205ENST00000601194 EPHA10Q5JZY3 1008 aa18.05■□□□□ 0.48
PSMC4-205ENST00000601194 SUPT20HQ8NEM7 779 aa18.05■□□□□ 0.48
PSMC4-205ENST00000601194 API5Q9BZZ5 524 aaKnown RBP18.05■□□□□ 0.48
PSMC4-205ENST00000601194 VPS33BQ9H267 617 aa18.05■□□□□ 0.48
PSMC4-205ENST00000601194 LTBP1Q14766 1721 aa18.04■□□□□ 0.48
PSMC4-205ENST00000601194 KIF3CO14782 793 aa18.04■□□□□ 0.48
PSMC4-205ENST00000601194 PPIP5K2O43314 1243 aa18.04■□□□□ 0.48
PSMC4-205ENST00000601194 BCAR3O75815 825 aa18.04■□□□□ 0.48
PSMC4-205ENST00000601194 ITGA6P23229 1130 aa18.04■□□□□ 0.48
PSMC4-205ENST00000601194 GPSM2P81274 684 aa18.04■□□□□ 0.48
PSMC4-205ENST00000601194 AOC3Q16853 763 aa18.04■□□□□ 0.48
PSMC4-205ENST00000601194 LARGE2Q8N3Y3 721 aa18.04■□□□□ 0.48
PSMC4-205ENST00000601194 ARHGAP45Q92619 1136 aa18.04■□□□□ 0.48
PSMC4-205ENST00000601194 NSFL1CQ9UNZ2 370 aaKnown RBP18.04■□□□□ 0.48
PSMC4-205ENST00000601194 ZNF541Q9H0D2 1346 aa18.03■□□□□ 0.48
PSMC4-205ENST00000601194 FZD9O00144 591 aa18.03■□□□□ 0.48
PSMC4-205ENST00000601194 CCT4P50991 539 aaKnown RBP18.03■□□□□ 0.48
PSMC4-205ENST00000601194 DPY19L2Q6NUT2 758 aa18.03■□□□□ 0.48
PSMC4-205ENST00000601194 JDP2Q8WYK2 163 aa18.03■□□□□ 0.48
PSMC4-205ENST00000601194 KAZALD1Q96I82 304 aa18.03■□□□□ 0.48
PSMC4-205ENST00000601194 SUCLG2Q96I99 432 aa18.03■□□□□ 0.48
PSMC4-205ENST00000601194 USP44Q9H0E7 712 aa18.03■□□□□ 0.48
PSMC4-205ENST00000601194 BSDC1Q9NW68 430 aaPredicted RBP18.03■□□□□ 0.48
PSMC4-205ENST00000601194 PODXL2Q9NZ53 605 aa18.03■□□□□ 0.48
PSMC4-205ENST00000601194 KIAA2012Q0VF49 1180 aa18.02■□□□□ 0.48
PSMC4-205ENST00000601194 LMBR1LQ6UX01 489 aa18.02■□□□□ 0.48
PSMC4-205ENST00000601194 POLLQ9UGP5 575 aa18.02■□□□□ 0.48
PSMC4-205ENST00000601194 DDNO94850 711 aaPredicted RBP18.01■□□□□ 0.47
PSMC4-205ENST00000601194 NIM1KQ8IY84 436 aa18.01■□□□□ 0.47
PSMC4-205ENST00000601194 TBC1D16Q8TBP0 767 aa18.01■□□□□ 0.47
PSMC4-205ENST00000601194 RRAGCQ9HB90 399 aa18.01■□□□□ 0.47
PSMC4-205ENST00000601194 ANKRD18BA2A2Z9 1011 aa18■□□□□ 0.47
PSMC4-205ENST00000601194 IPO8O15397 1037 aaKnown RBP18■□□□□ 0.47
PSMC4-205ENST00000601194 TRIM27P14373 513 aa18■□□□□ 0.47
PSMC4-205ENST00000601194 IGHMBP2P38935 993 aaKnown RBP18■□□□□ 0.47
PSMC4-205ENST00000601194 IFIT5Q13325 482 aaKnown RBP18■□□□□ 0.47
PSMC4-205ENST00000601194 ANKIB1Q9P2G1 1089 aa18■□□□□ 0.47
PSMC4-205ENST00000601194 MINPP1Q9UNW1 487 aa18■□□□□ 0.47
PSMC4-205ENST00000601194 CHMP3Q9Y3E7 222 aa18■□□□□ 0.47
PSMC4-205ENST00000601194 WDR90Q96KV7 1748 aa18■□□□□ 0.47
PSMC4-205ENST00000601194 XDHP47989 1333 aa17.99■□□□□ 0.47
PSMC4-205ENST00000601194 C6orf229H3BNL8 230 aa17.99■□□□□ 0.47
PSMC4-205ENST00000601194 RABL6Q3YEC7 729 aaPredicted RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms