RNA–Protein interactions for RNA: ENST00000600646.5

FKRP-220, Transcript of fukutin related protein, humanhuman

TSL 3

Gene FKRP, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-220ENST00000600646 COL11A2P13942 1736 aaPredicted RBP9.72□□□□□ -0.85
FKRP-220ENST00000600646 CACNA1SQ13698 1873 aa9.71□□□□□ -0.85
FKRP-220ENST00000600646 H7C1W4 665 aa9.71□□□□□ -0.86
FKRP-220ENST00000600646 GRM8O00222 908 aa9.71□□□□□ -0.86
FKRP-220ENST00000600646 MS4A1P11836 297 aa9.71□□□□□ -0.86
FKRP-220ENST00000600646 CTSWP56202 376 aa9.71□□□□□ -0.86
FKRP-220ENST00000600646 SP8Q8IXZ3 490 aa9.71□□□□□ -0.86
FKRP-220ENST00000600646 SYNE4Q8N205 404 aa9.71□□□□□ -0.86
FKRP-220ENST00000600646 FRAT1Q92837 279 aaPredicted RBP9.71□□□□□ -0.86
FKRP-220ENST00000600646 TNRC6CQ9HCJ0 1690 aaKnown RBP9.71□□□□□ -0.86
FKRP-220ENST00000600646 RPS8P62241 208 aaKnown RBP9.7□□□□□ -0.86
FKRP-220ENST00000600646 ZKSCAN2Q63HK3 967 aa9.7□□□□□ -0.86
FKRP-220ENST00000600646 DPY19L2Q6NUT2 758 aa9.7□□□□□ -0.86
FKRP-220ENST00000600646 ANKRD18AQ8IVF6 992 aa9.7□□□□□ -0.86
FKRP-220ENST00000600646 PLA2G12BQ9BX93 195 aa9.7□□□□□ -0.86
FKRP-220ENST00000600646 RNF181Q9P0P0 153 aa9.7□□□□□ -0.86
FKRP-220ENST00000600646 CHMP3Q9Y3E7 222 aa9.7□□□□□ -0.86
FKRP-220ENST00000600646 ATP6V0A2Q9Y487 856 aa9.7□□□□□ -0.86
FKRP-220ENST00000600646 ABCC4O15439 1325 aa9.7□□□□□ -0.86
FKRP-220ENST00000600646 LTBP3Q9NS15 1303 aa9.7□□□□□ -0.86
FKRP-220ENST00000600646 ZC3H4Q9UPT8 1303 aaKnown RBP9.7□□□□□ -0.86
FKRP-220ENST00000600646 LAMB2P55268 1798 aa9.7□□□□□ -0.86
FKRP-220ENST00000600646 IGHMBP2P38935 993 aaKnown RBP9.69□□□□□ -0.86
FKRP-220ENST00000600646 FKBP4Q02790 459 aaKnown RBP eCLIP9.69□□□□□ -0.86
FKRP-220ENST00000600646 CCDC57Q2TAC2 916 aa9.69□□□□□ -0.86
FKRP-220ENST00000600646 TAF7LQ5H9L4 462 aa9.69□□□□□ -0.86
FKRP-220ENST00000600646 C9orf131Q5VYM1 1079 aa9.69□□□□□ -0.86
FKRP-220ENST00000600646 DPP8Q6V1X1 898 aaPredicted RBP9.69□□□□□ -0.86
FKRP-220ENST00000600646 DDX60Q8IY21 1712 aaKnown RBP9.69□□□□□ -0.86
FKRP-220ENST00000600646 FTSJ3Q8IY81 847 aaKnown RBP9.69□□□□□ -0.86
FKRP-220ENST00000600646 MPNDQ8N594 471 aa9.69□□□□□ -0.86
FKRP-220ENST00000600646 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.69□□□□□ -0.86
FKRP-220ENST00000600646 JDP2Q8WYK2 163 aa9.69□□□□□ -0.86
FKRP-220ENST00000600646 JARID2Q92833 1246 aaPredicted RBP9.69□□□□□ -0.86
FKRP-220ENST00000600646 PSMD1Q99460 953 aa9.69□□□□□ -0.86
FKRP-220ENST00000600646 MPHOSPH8Q99549 860 aa9.69□□□□□ -0.86
FKRP-220ENST00000600646 VPS33BQ9H267 617 aa9.69□□□□□ -0.86
FKRP-220ENST00000600646 SLX4Q8IY92 1834 aa9.68□□□□□ -0.86
FKRP-220ENST00000600646 KDM2BQ8NHM5 1336 aa9.68□□□□□ -0.86
FKRP-220ENST00000600646 ANKRD18BA2A2Z9 1011 aa9.68□□□□□ -0.86
FKRP-220ENST00000600646 IFIT5Q13325 482 aaKnown RBP9.68□□□□□ -0.86
FKRP-220ENST00000600646 ATF7IPQ6VMQ6 1270 aa9.68□□□□□ -0.86
FKRP-220ENST00000600646 C3orf67Q6ZVT6 689 aa9.68□□□□□ -0.86
FKRP-220ENST00000600646 TTLL11Q8NHH1 800 aa9.68□□□□□ -0.86
FKRP-220ENST00000600646 C7orf43Q8WVR3 580 aa9.68□□□□□ -0.86
FKRP-220ENST00000600646 YTHDC1Q96MU7 727 aaKnown RBP9.68□□□□□ -0.86
FKRP-220ENST00000600646 RTL9Q8NET4 1388 aa9.67□□□□□ -0.86
FKRP-220ENST00000600646 G3V3G9 751 aa9.67□□□□□ -0.86
FKRP-220ENST00000600646 UBTFL1P0CB47 393 aaPredicted RBP9.67□□□□□ -0.86
FKRP-220ENST00000600646 IARSP41252 1262 aaKnown RBP9.67□□□□□ -0.86
FKRP-220ENST00000600646 RASSF7Q02833 373 aa9.67□□□□□ -0.86
FKRP-220ENST00000600646 DCAF8Q5TAQ9 597 aa9.67□□□□□ -0.86
FKRP-220ENST00000600646 CCDC85AQ96PX6 553 aaPredicted RBP9.67□□□□□ -0.86
FKRP-220ENST00000600646 EYA3Q99504 573 aa9.67□□□□□ -0.86
FKRP-220ENST00000600646 CHMP4BQ9H444 224 aaKnown RBP9.67□□□□□ -0.86
FKRP-220ENST00000600646 GPBP1L1Q9HC44 474 aaPredicted RBP9.67□□□□□ -0.86
FKRP-220ENST00000600646 ANKIB1Q9P2G1 1089 aa9.67□□□□□ -0.86
FKRP-220ENST00000600646 NSFL1CQ9UNZ2 370 aaKnown RBP9.67□□□□□ -0.86
FKRP-220ENST00000600646 MYH3P11055 1940 aa9.66□□□□□ -0.86
FKRP-220ENST00000600646 FER1L6Q2WGJ9 1857 aa9.66□□□□□ -0.86
FKRP-220ENST00000600646 NFKBIEO00221 500 aa9.66□□□□□ -0.86
FKRP-220ENST00000600646 BCAR3O75815 825 aa9.66□□□□□ -0.86
FKRP-220ENST00000600646 CSF1RP07333 972 aa9.66□□□□□ -0.86
FKRP-220ENST00000600646 GNAI3P08754 354 aa9.66□□□□□ -0.86
FKRP-220ENST00000600646 ITGA6P23229 1130 aa9.66□□□□□ -0.86
FKRP-220ENST00000600646 LARGE2Q8N3Y3 721 aa9.66□□□□□ -0.86
FKRP-220ENST00000600646 CELF1Q92879 486 aaKnown RBP9.66□□□□□ -0.86
FKRP-220ENST00000600646 GREM2Q9H772 168 aa9.66□□□□□ -0.86
FKRP-220ENST00000600646 SEC31BQ9NQW1 1179 aa9.66□□□□□ -0.86
FKRP-220ENST00000600646 BSDC1Q9NW68 430 aaPredicted RBP9.66□□□□□ -0.86
FKRP-220ENST00000600646 UTYO14607 1347 aa9.65□□□□□ -0.86
FKRP-220ENST00000600646 C6orf229H3BNL8 230 aa9.65□□□□□ -0.86
FKRP-220ENST00000600646 PPIP5K2O43314 1243 aa9.65□□□□□ -0.86
FKRP-220ENST00000600646 NBPF7P0C2Y1 421 aaPredicted RBP9.65□□□□□ -0.86
FKRP-220ENST00000600646 CASP7P55210 303 aa9.65□□□□□ -0.86
FKRP-220ENST00000600646 EIF6P56537 245 aaKnown RBP9.65□□□□□ -0.86
FKRP-220ENST00000600646 INTS3Q68E01 1043 aaKnown RBP9.65□□□□□ -0.86
FKRP-220ENST00000600646 LMBR1LQ6UX01 489 aa9.65□□□□□ -0.86
FKRP-220ENST00000600646 NIM1KQ8IY84 436 aa9.65□□□□□ -0.86
FKRP-220ENST00000600646 ZC3H12CQ9C0D7 883 aaKnown RBP9.65□□□□□ -0.86
FKRP-220ENST00000600646 ANKRD2Q9GZV1 360 aa9.65□□□□□ -0.86
FKRP-220ENST00000600646 ZNF277Q9NRM2 450 aaPredicted RBP9.65□□□□□ -0.86
FKRP-220ENST00000600646 RCAN3Q9UKA8 241 aa9.65□□□□□ -0.86
FKRP-220ENST00000600646 XDHP47989 1333 aa9.64□□□□□ -0.87
FKRP-220ENST00000600646 TRIM27P14373 513 aa9.64□□□□□ -0.87
FKRP-220ENST00000600646 KCNJ4P48050 445 aa9.64□□□□□ -0.87
FKRP-220ENST00000600646 FOXO4P98177 505 aa9.64□□□□□ -0.87
FKRP-220ENST00000600646 WASHC4Q2M389 1173 aa9.64□□□□□ -0.87
FKRP-220ENST00000600646 FAM161AQ3B820 660 aa9.64□□□□□ -0.87
FKRP-220ENST00000600646 C16orf71Q8IYS4 520 aaPredicted RBP9.64□□□□□ -0.87
FKRP-220ENST00000600646 DZIP1LQ8IYY4 767 aaKnown RBP9.64□□□□□ -0.87
FKRP-220ENST00000600646 ZNF784Q8NCA9 323 aaPredicted RBP9.64□□□□□ -0.87
FKRP-220ENST00000600646 CLUAP1Q96AJ1 413 aa9.64□□□□□ -0.87
FKRP-220ENST00000600646 RTFDC1Q9BY42 306 aaPredicted RBP9.64□□□□□ -0.87
FKRP-220ENST00000600646 USP44Q9H0E7 712 aa9.64□□□□□ -0.87
FKRP-220ENST00000600646 CNNM1Q9NRU3 951 aa9.64□□□□□ -0.87
FKRP-220ENST00000600646 GGA1Q9UJY5 639 aa9.64□□□□□ -0.87
FKRP-220ENST00000600646 ATP2B4P23634 1241 aa9.63□□□□□ -0.87
FKRP-220ENST00000600646 OLFM4Q6UX06 510 aa9.63□□□□□ -0.87
FKRP-220ENST00000600646 LDHAL6AQ6ZMR3 332 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms