RNA–Protein interactions for RNA: ENST00000600475.1

SHD-205, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

TSL 3

Gene SHD, Length 379 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-205ENST00000600475 COG6Q9Y2V7 657 aa12.76□□□□□ -0.37
SHD-205ENST00000600475 UBTFL1P0CB47 393 aaPredicted RBP12.75□□□□□ -0.37
SHD-205ENST00000600475 LAMB2P55268 1798 aa12.75□□□□□ -0.37
SHD-205ENST00000600475 RABL6Q3YEC7 729 aaPredicted RBP12.75□□□□□ -0.37
SHD-205ENST00000600475 CRAMP1Q96RY5 1269 aa12.75□□□□□ -0.37
SHD-205ENST00000600475 HDAC5Q9UQL6 1122 aa12.75□□□□□ -0.37
SHD-205ENST00000600475 RTL9Q8NET4 1388 aa12.74□□□□□ -0.37
SHD-205ENST00000600475 CCDC152Q4G0S7 254 aa12.74□□□□□ -0.37
SHD-205ENST00000600475 ANKRD44Q8N8A2 993 aa12.74□□□□□ -0.37
SHD-205ENST00000600475 RPGRQ92834 1020 aaKnown RBP12.74□□□□□ -0.37
SHD-205ENST00000600475 CNKSR1Q969H4 720 aa12.74□□□□□ -0.37
SHD-205ENST00000600475 PIM2Q9P1W9 311 aa12.74□□□□□ -0.37
SHD-205ENST00000600475 DDX19BQ9UMR2 479 aa12.74□□□□□ -0.37
SHD-205ENST00000600475 COL11A2P13942 1736 aaPredicted RBP12.74□□□□□ -0.37
SHD-205ENST00000600475 CENPBP07199 599 aaPredicted RBP12.73□□□□□ -0.37
SHD-205ENST00000600475 ALDH1B1P30837 517 aa12.73□□□□□ -0.37
SHD-205ENST00000600475 LMBR1LQ6UX01 489 aa12.73□□□□□ -0.37
SHD-205ENST00000600475 TTLL6Q8N841 843 aa12.73□□□□□ -0.37
SHD-205ENST00000600475 ZNF622Q969S3 477 aaKnown RBP eCLIP12.73□□□□□ -0.37
SHD-205ENST00000600475 RBM17Q96I25 401 aaKnown RBP12.73□□□□□ -0.37
SHD-205ENST00000600475 BICC1Q9H694 974 aaKnown RBP12.73□□□□□ -0.37
SHD-205ENST00000600475 ZBTB40Q9NUA8 1239 aa12.73□□□□□ -0.37
SHD-205ENST00000600475 LRRFIP2Q9Y608 721 aaKnown RBP12.73□□□□□ -0.37
SHD-205ENST00000600475 MYH3P11055 1940 aa12.72□□□□□ -0.37
SHD-205ENST00000600475 DLEC1Q9Y238 1755 aa12.72□□□□□ -0.37
SHD-205ENST00000600475 GNAI2P04899 355 aa12.72□□□□□ -0.37
SHD-205ENST00000600475 DDX46Q7L014 1031 aaKnown RBP12.72□□□□□ -0.37
SHD-205ENST00000600475 C7orf43Q8WVR3 580 aa12.72□□□□□ -0.37
SHD-205ENST00000600475 CHMP4BQ9H444 224 aaKnown RBP12.72□□□□□ -0.37
SHD-205ENST00000600475 GREM2Q9H772 168 aa12.72□□□□□ -0.37
SHD-205ENST00000600475 SEC31BQ9NQW1 1179 aa12.72□□□□□ -0.37
SHD-205ENST00000600475 BRCA1P38398 1863 aaKnown RBP12.72□□□□□ -0.37
SHD-205ENST00000600475 BBOX1O75936 387 aa12.71□□□□□ -0.37
SHD-205ENST00000600475 MTX1Q13505 466 aa12.71□□□□□ -0.37
SHD-205ENST00000600475 GRAPQ13588 217 aa12.71□□□□□ -0.37
SHD-205ENST00000600475 FAM161AQ3B820 660 aa12.71□□□□□ -0.37
SHD-205ENST00000600475 DALRD3Q5D0E6 543 aaKnown RBP12.71□□□□□ -0.37
SHD-205ENST00000600475 PRPF40BQ6NWY9 871 aaKnown RBP12.71□□□□□ -0.37
SHD-205ENST00000600475 GRAPLQ8TC17 118 aaPredicted RBP12.71□□□□□ -0.37
SHD-205ENST00000600475 CCDC85AQ96PX6 553 aaPredicted RBP12.71□□□□□ -0.37
SHD-205ENST00000600475 ITGA6P23229 1130 aa12.7□□□□□ -0.38
SHD-205ENST00000600475 RPS8P62241 208 aaKnown RBP12.7□□□□□ -0.38
SHD-205ENST00000600475 CELF1Q92879 486 aaKnown RBP12.7□□□□□ -0.38
SHD-205ENST00000600475 SLX4Q8IY92 1834 aa12.69□□□□□ -0.38
SHD-205ENST00000600475 IFIT5Q13325 482 aaKnown RBP12.69□□□□□ -0.38
SHD-205ENST00000600475 TMC4Q7Z404 712 aa12.69□□□□□ -0.38
SHD-205ENST00000600475 CRBNQ96SW2 442 aa12.69□□□□□ -0.38
SHD-205ENST00000600475 CDC5LQ99459 802 aaKnown RBP12.69□□□□□ -0.38
SHD-205ENST00000600475 TAF1P21675 1872 aa12.69□□□□□ -0.38
SHD-205ENST00000600475 GOLGB1Q14789 3259 aaKnown RBP12.69□□□□□ -0.38
SHD-205ENST00000600475 COL4A1P02462 1669 aa12.68□□□□□ -0.38
SHD-205ENST00000600475 ANKRD18BA2A2Z9 1011 aa12.68□□□□□ -0.38
SHD-205ENST00000600475 YBX3P16989 372 aaKnown RBP eCLIP12.68□□□□□ -0.38
SHD-205ENST00000600475 RFX5P48382 616 aaPredicted RBP12.68□□□□□ -0.38
SHD-205ENST00000600475 ATP8B2P98198 1209 aa12.68□□□□□ -0.38
SHD-205ENST00000600475 CCDC57Q2TAC2 916 aa12.68□□□□□ -0.38
SHD-205ENST00000600475 ANKRD18AQ8IVF6 992 aa12.68□□□□□ -0.38
SHD-205ENST00000600475 C1orf115Q9H7X2 142 aa12.68□□□□□ -0.38
SHD-205ENST00000600475 WWC3Q9ULE0 1092 aa12.68□□□□□ -0.38
SHD-205ENST00000600475 BCS1LQ9Y276 419 aa12.68□□□□□ -0.38
SHD-205ENST00000600475 CHMP3Q9Y3E7 222 aa12.68□□□□□ -0.38
SHD-205ENST00000600475 ATP6V0A2Q9Y487 856 aa12.68□□□□□ -0.38
SHD-205ENST00000600475 PPEF1O14829 653 aaPredicted RBP12.67□□□□□ -0.38
SHD-205ENST00000600475 CC2D2BQ6DHV5 1058 aa12.67□□□□□ -0.38
SHD-205ENST00000600475 SP8Q8IXZ3 490 aa12.67□□□□□ -0.38
SHD-205ENST00000600475 BSDC1Q9NW68 430 aaPredicted RBP12.67□□□□□ -0.38
SHD-205ENST00000600475 PNMA6EA0A0J9YXQ4 647 aa12.66□□□□□ -0.38
SHD-205ENST00000600475 C21orf2O43822 256 aa12.66□□□□□ -0.38
SHD-205ENST00000600475 IGHMBP2P38935 993 aaKnown RBP12.66□□□□□ -0.38
SHD-205ENST00000600475 PTPN12Q05209 780 aaKnown RBP12.66□□□□□ -0.38
SHD-205ENST00000600475 AAMPQ13685 434 aa12.66□□□□□ -0.38
SHD-205ENST00000600475 SOGA3Q5TF21 947 aa12.66□□□□□ -0.38
SHD-205ENST00000600475 CEP85Q6P2H3 762 aa12.66□□□□□ -0.38
SHD-205ENST00000600475 SSH3Q8TE77 659 aa12.66□□□□□ -0.38
SHD-205ENST00000600475 ARFGEF1Q9Y6D6 1849 aa12.65□□□□□ -0.38
SHD-205ENST00000600475 SNED1Q8TER0 1413 aa12.65□□□□□ -0.38
SHD-205ENST00000600475 SRGAP3O43295 1099 aa12.65□□□□□ -0.38
SHD-205ENST00000600475 POLA2Q14181 598 aa12.65□□□□□ -0.38
SHD-205ENST00000600475 GPR162Q16538 588 aa12.65□□□□□ -0.38
SHD-205ENST00000600475 GRIPAP1Q4V328 841 aa12.65□□□□□ -0.38
SHD-205ENST00000600475 OLFM4Q6UX06 510 aa12.65□□□□□ -0.38
SHD-205ENST00000600475 SLC51AQ86UW1 340 aa12.65□□□□□ -0.38
SHD-205ENST00000600475 RPAP2Q8IXW5 612 aaPredicted RBP12.65□□□□□ -0.38
SHD-205ENST00000600475 EXOC6Q8TAG9 804 aa12.65□□□□□ -0.38
SHD-205ENST00000600475 ZNF594Q96JF6 807 aaPredicted RBP12.65□□□□□ -0.38
SHD-205ENST00000600475 COPRSQ9NQ92 184 aa12.65□□□□□ -0.38
SHD-205ENST00000600475 GRIN3BO60391 1043 aa12.64□□□□□ -0.39
SHD-205ENST00000600475 CCDC93Q567U6 631 aa12.64□□□□□ -0.39
SHD-205ENST00000600475 TAF7LQ5H9L4 462 aa12.64□□□□□ -0.39
SHD-205ENST00000600475 LDHAL6AQ6ZMR3 332 aa12.64□□□□□ -0.39
SHD-205ENST00000600475 SIRT2Q8IXJ6 389 aa12.64□□□□□ -0.39
SHD-205ENST00000600475 KLHDC4Q8TBB5 520 aa12.64□□□□□ -0.39
SHD-205ENST00000600475 MPHOSPH8Q99549 860 aa12.64□□□□□ -0.39
SHD-205ENST00000600475 ZNF219Q9P2Y4 722 aaPredicted RBP12.64□□□□□ -0.39
SHD-205ENST00000600475 FBXO3Q9UK99 471 aa12.64□□□□□ -0.39
SHD-205ENST00000600475 MINPP1Q9UNW1 487 aa12.64□□□□□ -0.39
SHD-205ENST00000600475 RIPOR2Q9Y4F9 1068 aa12.64□□□□□ -0.39
SHD-205ENST00000600475 IRX6P78412 446 aaPredicted RBP12.63□□□□□ -0.39
SHD-205ENST00000600475 RTKN2Q8IZC4 609 aa12.63□□□□□ -0.39
SHD-205ENST00000600475 PELP1Q8IZL8 1130 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms