RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 HCLS1P14317 486 aaPredicted RBP15.34■□□□□ 0.05
TGFB1-204ENST00000600196 CNKSR1Q969H4 720 aa15.34■□□□□ 0.05
TGFB1-204ENST00000600196 CRBNQ96SW2 442 aa15.34■□□□□ 0.05
TGFB1-204ENST00000600196 CDC5LQ99459 802 aaKnown RBP15.34■□□□□ 0.05
TGFB1-204ENST00000600196 IFIT5Q13325 482 aaKnown RBP15.33■□□□□ 0.04
TGFB1-204ENST00000600196 CCDC57Q2TAC2 916 aa15.33■□□□□ 0.04
TGFB1-204ENST00000600196 LMBR1LQ6UX01 489 aa15.33■□□□□ 0.04
TGFB1-204ENST00000600196 DDX46Q7L014 1031 aaKnown RBP15.33■□□□□ 0.04
TGFB1-204ENST00000600196 ANKRD44Q8N8A2 993 aa15.33■□□□□ 0.04
TGFB1-204ENST00000600196 SSH3Q8TE77 659 aa15.33■□□□□ 0.04
TGFB1-204ENST00000600196 BICC1Q9H694 974 aaKnown RBP15.33■□□□□ 0.04
TGFB1-204ENST00000600196 LRRFIP2Q9Y608 721 aaKnown RBP15.33■□□□□ 0.04
TGFB1-204ENST00000600196 KIF13BQ9NQT8 1826 aa15.33■□□□□ 0.04
TGFB1-204ENST00000600196 ABCC12Q96J65 1359 aa15.33■□□□□ 0.04
TGFB1-204ENST00000600196 LAMB2P55268 1798 aa15.32■□□□□ 0.04
TGFB1-204ENST00000600196 ANKRD18BA2A2Z9 1011 aa15.32■□□□□ 0.04
TGFB1-204ENST00000600196 HSP90AB4PQ58FF6 505 aa15.32■□□□□ 0.04
TGFB1-204ENST00000600196 CC2D2BQ6DHV5 1058 aa15.32■□□□□ 0.04
TGFB1-204ENST00000600196 SYNE4Q8N205 404 aa15.32■□□□□ 0.04
TGFB1-204ENST00000600196 RPGRQ92834 1020 aaKnown RBP15.32■□□□□ 0.04
TGFB1-204ENST00000600196 COPRSQ9NQ92 184 aa15.32■□□□□ 0.04
TGFB1-204ENST00000600196 POLA2Q14181 598 aa15.31■□□□□ 0.04
TGFB1-204ENST00000600196 CEP85Q6P2H3 762 aa15.31■□□□□ 0.04
TGFB1-204ENST00000600196 C2CD5Q86YS7 1000 aa15.31■□□□□ 0.04
TGFB1-204ENST00000600196 LRP5O75197 1615 aa15.31■□□□□ 0.04
TGFB1-204ENST00000600196 CIAO1O76071 339 aa15.3■□□□□ 0.04
TGFB1-204ENST00000600196 RPS8P62241 208 aaKnown RBP15.3■□□□□ 0.04
TGFB1-204ENST00000600196 HDAC1Q13547 482 aaPredicted RBP15.3■□□□□ 0.04
TGFB1-204ENST00000600196 GRAPQ13588 217 aa15.3■□□□□ 0.04
TGFB1-204ENST00000600196 RTL5Q5HYW3 569 aaPredicted RBP15.3■□□□□ 0.04
TGFB1-204ENST00000600196 EPHA10Q5JZY3 1008 aa15.3■□□□□ 0.04
TGFB1-204ENST00000600196 EXOC6Q8TAG9 804 aa15.3■□□□□ 0.04
TGFB1-204ENST00000600196 GRAPLQ8TC17 118 aaPredicted RBP15.3■□□□□ 0.04
TGFB1-204ENST00000600196 BSDC1Q9NW68 430 aaPredicted RBP15.3■□□□□ 0.04
TGFB1-204ENST00000600196 PIM2Q9P1W9 311 aa15.3■□□□□ 0.04
TGFB1-204ENST00000600196 PPP1R1BQ9UD71 204 aaPredicted RBP15.3■□□□□ 0.04
TGFB1-204ENST00000600196 NOP58Q9Y2X3 529 aaKnown RBP15.3■□□□□ 0.04
TGFB1-204ENST00000600196 SRGAP3O43295 1099 aa15.29■□□□□ 0.04
TGFB1-204ENST00000600196 ITGA6P23229 1130 aa15.29■□□□□ 0.04
TGFB1-204ENST00000600196 SOGA3Q5TF21 947 aa15.29■□□□□ 0.04
TGFB1-204ENST00000600196 ANKRD18AQ8IVF6 992 aa15.29■□□□□ 0.04
TGFB1-204ENST00000600196 JARID2Q92833 1246 aaPredicted RBP15.29■□□□□ 0.04
TGFB1-204ENST00000600196 RWDD1Q9H446 243 aaPredicted RBP15.29■□□□□ 0.04
TGFB1-204ENST00000600196 MYH3P11055 1940 aa15.29■□□□□ 0.04
TGFB1-204ENST00000600196 DDX60Q8IY21 1712 aaKnown RBP15.29■□□□□ 0.04
TGFB1-204ENST00000600196 IGHMBP2P38935 993 aaKnown RBP15.28■□□□□ 0.04
TGFB1-204ENST00000600196 RFX5P48382 616 aaPredicted RBP15.28■□□□□ 0.04
TGFB1-204ENST00000600196 TTLL6Q8N841 843 aa15.28■□□□□ 0.04
TGFB1-204ENST00000600196 TMX4Q9H1E5 349 aaPredicted RBP15.28■□□□□ 0.04
TGFB1-204ENST00000600196 GREM2Q9H772 168 aa15.28■□□□□ 0.04
TGFB1-204ENST00000600196 KCNA3P22001 575 aa15.27■□□□□ 0.04
TGFB1-204ENST00000600196 PTPN12Q05209 780 aaKnown RBP15.27■□□□□ 0.04
TGFB1-204ENST00000600196 SP8Q8IXZ3 490 aa15.27■□□□□ 0.04
TGFB1-204ENST00000600196 MPHOSPH8Q99549 860 aa15.27■□□□□ 0.04
TGFB1-204ENST00000600196 SYT17Q9BSW7 474 aa15.27■□□□□ 0.04
TGFB1-204ENST00000600196 RAB11FIP3O75154 756 aa15.26■□□□□ 0.03
TGFB1-204ENST00000600196 DPEP1P16444 411 aa15.26■□□□□ 0.03
TGFB1-204ENST00000600196 IL15P40933 162 aaPredicted RBP15.26■□□□□ 0.03
TGFB1-204ENST00000600196 FAM161AQ3B820 660 aa15.26■□□□□ 0.03
TGFB1-204ENST00000600196 TAF7LQ5H9L4 462 aa15.26■□□□□ 0.03
TGFB1-204ENST00000600196 C3orf67Q6ZVT6 689 aa15.26■□□□□ 0.03
TGFB1-204ENST00000600196 ERC1Q8IUD2 1116 aa15.26■□□□□ 0.03
TGFB1-204ENST00000600196 GCC1Q96CN9 775 aa15.26■□□□□ 0.03
TGFB1-204ENST00000600196 FHDC1Q9C0D6 1143 aaPredicted RBP15.26■□□□□ 0.03
TGFB1-204ENST00000600196 ANKRD2Q9GZV1 360 aa15.26■□□□□ 0.03
TGFB1-204ENST00000600196 ANKRD31Q8N7Z5 1873 aa15.26■□□□□ 0.03
TGFB1-204ENST00000600196 MROH5Q6ZUA9 1318 aa15.25■□□□□ 0.03
TGFB1-204ENST00000600196 EYA2O00167 538 aa15.25■□□□□ 0.03
TGFB1-204ENST00000600196 DALRD3Q5D0E6 543 aaKnown RBP15.25■□□□□ 0.03
TGFB1-204ENST00000600196 LDHAL6AQ6ZMR3 332 aa15.25■□□□□ 0.03
TGFB1-204ENST00000600196 SIRT2Q8IXJ6 389 aa15.25■□□□□ 0.03
TGFB1-204ENST00000600196 CCDC24Q8N4L8 307 aa15.25■□□□□ 0.03
TGFB1-204ENST00000600196 VPS33BQ9H267 617 aa15.25■□□□□ 0.03
TGFB1-204ENST00000600196 DCTPP1Q9H773 170 aa15.25■□□□□ 0.03
TGFB1-204ENST00000600196 ATP6V0A2Q9Y487 856 aa15.25■□□□□ 0.03
TGFB1-204ENST00000600196 PCDHB15Q9Y5E8 787 aa15.25■□□□□ 0.03
TGFB1-204ENST00000600196 PNMA6EA0A0J9YXQ4 647 aa15.24■□□□□ 0.03
TGFB1-204ENST00000600196 G3BP1Q13283 466 aaKnown RBP eCLIP15.24■□□□□ 0.03
TGFB1-204ENST00000600196 C7orf43Q8WVR3 580 aa15.24■□□□□ 0.03
TGFB1-204ENST00000600196 ZNF622Q969S3 477 aaKnown RBP eCLIP15.24■□□□□ 0.03
TGFB1-204ENST00000600196 PODXL2Q9NZ53 605 aa15.24■□□□□ 0.03
TGFB1-204ENST00000600196 CHMP3Q9Y3E7 222 aa15.24■□□□□ 0.03
TGFB1-204ENST00000600196 RIPOR2Q9Y4F9 1068 aa15.24■□□□□ 0.03
TGFB1-204ENST00000600196 A0A0G2JLW4 131 aa15.23■□□□□ 0.03
TGFB1-204ENST00000600196 ZBTB22O15209 634 aa15.23■□□□□ 0.03
TGFB1-204ENST00000600196 RTKN2Q8IZC4 609 aa15.23■□□□□ 0.03
TGFB1-204ENST00000600196 C1orf115Q9H7X2 142 aa15.23■□□□□ 0.03
TGFB1-204ENST00000600196 GPR108Q9NPR9 543 aa15.23■□□□□ 0.03
TGFB1-204ENST00000600196 SEC31BQ9NQW1 1179 aa15.23■□□□□ 0.03
TGFB1-204ENST00000600196 DLEC1Q9Y238 1755 aa15.22■□□□□ 0.03
TGFB1-204ENST00000600196 PPEF1O14829 653 aaPredicted RBP15.22■□□□□ 0.03
TGFB1-204ENST00000600196 CHRNA5P30532 468 aa15.22■□□□□ 0.03
TGFB1-204ENST00000600196 PRPF40BQ6NWY9 871 aaKnown RBP15.22■□□□□ 0.03
TGFB1-204ENST00000600196 CELF1Q92879 486 aaKnown RBP15.22■□□□□ 0.03
TGFB1-204ENST00000600196 PPP4R2Q9NY27 417 aa15.22■□□□□ 0.03
TGFB1-204ENST00000600196 SURF6O75683 361 aaKnown RBP15.21■□□□□ 0.03
TGFB1-204ENST00000600196 SUPT20HQ8NEM7 779 aa15.21■□□□□ 0.03
TGFB1-204ENST00000600196 CNNM1Q9NRU3 951 aa15.21■□□□□ 0.03
TGFB1-204ENST00000600196 MINPP1Q9UNW1 487 aa15.21■□□□□ 0.03
TGFB1-204ENST00000600196 AKAP2Q9Y2D5 859 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 107.2 ms