RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 CAPNS2Q96L46 248 aa22.45■■□□□ 1.18
SMG9-210ENST00000600097 TRAF5O00463 557 aa22.44■■□□□ 1.18
SMG9-210ENST00000600097 GMPSP49915 693 aaPredicted RBP22.44■■□□□ 1.18
SMG9-210ENST00000600097 TNIP1Q15025 636 aa22.44■■□□□ 1.18
SMG9-210ENST00000600097 NEUROD2Q15784 382 aa22.44■■□□□ 1.18
SMG9-210ENST00000600097 CST9Q5W186 159 aa22.44■■□□□ 1.18
SMG9-210ENST00000600097 PAXIP1Q6ZW49 1069 aaPredicted RBP22.44■■□□□ 1.18
SMG9-210ENST00000600097 BEGAINQ9BUH8 593 aa22.43■■□□□ 1.18
SMG9-210ENST00000600097 TLL2Q9Y6L7 1015 aa22.43■■□□□ 1.18
SMG9-210ENST00000600097 MYBBP1AQ9BQG0 1328 aaKnown RBP22.42■■□□□ 1.18
SMG9-210ENST00000600097 HOXB7P09629 217 aa22.42■■□□□ 1.18
SMG9-210ENST00000600097 PLBD2Q8NHP8 589 aa22.42■■□□□ 1.18
SMG9-210ENST00000600097 ZC3H15Q8WU90 426 aaKnown RBP22.42■■□□□ 1.18
SMG9-210ENST00000600097 RUNDC1Q96C34 613 aa22.42■■□□□ 1.18
SMG9-210ENST00000600097 GPR101Q96P66 508 aaPredicted RBP22.42■■□□□ 1.18
SMG9-210ENST00000600097 BCL2L13Q9BXK5 485 aa22.42■■□□□ 1.18
SMG9-210ENST00000600097 CHPF2Q9P2E5 772 aa22.42■■□□□ 1.18
SMG9-210ENST00000600097 PGAP2Q9UHJ9 254 aa22.42■■□□□ 1.18
SMG9-210ENST00000600097 ANKRD36CQ5JPF3 1778 aa22.42■■□□□ 1.18
SMG9-210ENST00000600097 KRT24Q2M2I5 525 aa22.41■■□□□ 1.18
SMG9-210ENST00000600097 HDGFL1Q5TGJ6 251 aa22.41■■□□□ 1.18
SMG9-210ENST00000600097 CYP4F22Q6NT55 531 aa22.41■■□□□ 1.18
SMG9-210ENST00000600097 CCDC146Q8IYE0 955 aa22.41■■□□□ 1.18
SMG9-210ENST00000600097 LAS1LQ9Y4W2 734 aaKnown RBP22.41■■□□□ 1.18
SMG9-210ENST00000600097 RAD17O75943 681 aa22.4■■□□□ 1.18
SMG9-210ENST00000600097 ANKRD13DQ6ZTN6 518 aa22.4■■□□□ 1.18
SMG9-210ENST00000600097 DBF4Q9UBU7 674 aaPredicted RBP22.4■■□□□ 1.18
SMG9-210ENST00000600097 TRIM35Q9UPQ4 493 aa22.4■■□□□ 1.18
SMG9-210ENST00000600097 MAP2K2P36507 400 aa22.39■■□□□ 1.17
SMG9-210ENST00000600097 GRM1Q13255 1194 aa22.39■■□□□ 1.17
SMG9-210ENST00000600097 WDR43Q15061 677 aaKnown RBP eCLIP22.39■■□□□ 1.17
SMG9-210ENST00000600097 LAMB2P55268 1798 aa22.38■■□□□ 1.17
SMG9-210ENST00000600097 CELF2O95319 508 aaKnown RBP22.38■■□□□ 1.17
SMG9-210ENST00000600097 SAPCD2Q86UD0 394 aa22.38■■□□□ 1.17
SMG9-210ENST00000600097 ISCA1Q9BUE6 129 aa22.38■■□□□ 1.17
SMG9-210ENST00000600097 THSD7BQ9C0I4 1608 aa22.38■■□□□ 1.17
SMG9-210ENST00000600097 TRPM7Q96QT4 1865 aa22.37■■□□□ 1.17
SMG9-210ENST00000600097 SF3B3Q15393 1217 aaKnown RBP22.37■■□□□ 1.17
SMG9-210ENST00000600097 CDC37L1Q7L3B6 337 aa22.37■■□□□ 1.17
SMG9-210ENST00000600097 HHIPL1Q96JK4 782 aa22.37■■□□□ 1.17
SMG9-210ENST00000600097 GLIS2Q9BZE0 524 aaPredicted RBP22.37■■□□□ 1.17
SMG9-210ENST00000600097 HYPKQ9NX55 129 aa22.37■■□□□ 1.17
SMG9-210ENST00000600097 CNOT7Q9UIV1 285 aaKnown RBP22.37■■□□□ 1.17
SMG9-210ENST00000600097 YDJCA8MPS7 323 aa22.36■■□□□ 1.17
SMG9-210ENST00000600097 H7C1D1 291 aa22.36■■□□□ 1.17
SMG9-210ENST00000600097 WASHC4Q2M389 1173 aa22.36■■□□□ 1.17
SMG9-210ENST00000600097 FAM89AQ96GI7 184 aa22.36■■□□□ 1.17
SMG9-210ENST00000600097 HIRAP54198 1017 aaPredicted RBP22.35■■□□□ 1.17
SMG9-210ENST00000600097 DPF2Q92785 391 aa22.35■■□□□ 1.17
SMG9-210ENST00000600097 ABHD8Q96I13 439 aa22.35■■□□□ 1.17
SMG9-210ENST00000600097 CFAP44Q96MT7 982 aa22.35■■□□□ 1.17
SMG9-210ENST00000600097 NSFL1CQ9UNZ2 370 aaKnown RBP22.35■■□□□ 1.17
SMG9-210ENST00000600097 DDX10Q13206 875 aaKnown RBP22.34■■□□□ 1.17
SMG9-210ENST00000600097 TRIM28Q13263 835 aaKnown RBP22.34■■□□□ 1.17
SMG9-210ENST00000600097 TRPM4Q8TD43 1214 aa22.34■■□□□ 1.17
SMG9-210ENST00000600097 DUOX1Q9NRD9 1551 aa22.33■■□□□ 1.17
SMG9-210ENST00000600097 ATP5J2-PTCD1G3V325 749 aa22.33■■□□□ 1.17
SMG9-210ENST00000600097 CA12O43570 354 aa22.33■■□□□ 1.17
SMG9-210ENST00000600097 DUSP27Q5VZP5 1158 aa22.33■■□□□ 1.17
SMG9-210ENST00000600097 MICALL2Q8IY33 904 aa22.33■■□□□ 1.17
SMG9-210ENST00000600097 CELF1Q92879 486 aaKnown RBP22.33■■□□□ 1.17
SMG9-210ENST00000600097 ZNF428Q96B54 188 aa22.33■■□□□ 1.17
SMG9-210ENST00000600097 ADAMTS8Q9UP79 889 aa22.33■■□□□ 1.17
SMG9-210ENST00000600097 LRRC37AA6NMS7 1700 aa22.32■■□□□ 1.16
SMG9-210ENST00000600097 AOC2O75106 756 aa22.32■■□□□ 1.16
SMG9-210ENST00000600097 EYA3Q99504 573 aa22.32■■□□□ 1.16
SMG9-210ENST00000600097 C6orf229H3BNL8 230 aa22.31■■□□□ 1.16
SMG9-210ENST00000600097 PSMD14O00487 310 aa22.31■■□□□ 1.16
SMG9-210ENST00000600097 IRS4O14654 1257 aaPredicted RBP22.31■■□□□ 1.16
SMG9-210ENST00000600097 HSP90B1P14625 803 aaKnown RBP22.31■■□□□ 1.16
SMG9-210ENST00000600097 RPS12P25398 132 aaKnown RBP22.31■■□□□ 1.16
SMG9-210ENST00000600097 ZNF408Q9H9D4 720 aa22.31■■□□□ 1.16
SMG9-210ENST00000600097 BRPF1P55201 1214 aaPredicted RBP22.3■■□□□ 1.16
SMG9-210ENST00000600097 DBNDD1Q9H9R9 158 aa22.3■■□□□ 1.16
SMG9-210ENST00000600097 POLLQ9UGP5 575 aa22.3■■□□□ 1.16
SMG9-210ENST00000600097 ZBTB12Q9Y330 459 aaPredicted RBP22.3■■□□□ 1.16
SMG9-210ENST00000600097 DDX60Q8IY21 1712 aaKnown RBP22.29■■□□□ 1.16
SMG9-210ENST00000600097 SHTN1A0MZ66 631 aa22.29■■□□□ 1.16
SMG9-210ENST00000600097 RIMBP2O15034 1052 aa22.29■■□□□ 1.16
SMG9-210ENST00000600097 RPS8P62241 208 aaKnown RBP22.29■■□□□ 1.16
SMG9-210ENST00000600097 GPSM2P81274 684 aa22.29■■□□□ 1.16
SMG9-210ENST00000600097 RTL5Q5HYW3 569 aaPredicted RBP22.29■■□□□ 1.16
SMG9-210ENST00000600097 RIC3Q7Z5B4 369 aa22.29■■□□□ 1.16
SMG9-210ENST00000600097 MBIPQ9NS73 344 aa22.29■■□□□ 1.16
SMG9-210ENST00000600097 TAF1P21675 1872 aa22.28■■□□□ 1.16
SMG9-210ENST00000600097 ECE2O60344 883 aa22.28■■□□□ 1.16
SMG9-210ENST00000600097 GOLGA2Q08379 1002 aa22.28■■□□□ 1.16
SMG9-210ENST00000600097 USP48Q86UV5 1035 aa22.28■■□□□ 1.16
SMG9-210ENST00000600097 ZBTB38Q8NAP3 1195 aaPredicted RBP22.28■■□□□ 1.16
SMG9-210ENST00000600097 NOGQ13253 232 aa22.27■■□□□ 1.16
SMG9-210ENST00000600097 SAMD7Q7Z3H4 446 aa22.27■■□□□ 1.16
SMG9-210ENST00000600097 TBC1D16Q8TBP0 767 aa22.27■■□□□ 1.16
SMG9-210ENST00000600097 ZNF853P0CG23 659 aa22.26■■□□□ 1.15
SMG9-210ENST00000600097 CALD1Q05682 793 aaKnown RBP22.26■■□□□ 1.15
SMG9-210ENST00000600097 KRT26Q7Z3Y9 468 aa22.26■■□□□ 1.15
SMG9-210ENST00000600097 ZC3H12CQ9C0D7 883 aaKnown RBP22.26■■□□□ 1.15
SMG9-210ENST00000600097 IFT57Q9NWB7 429 aa22.26■■□□□ 1.15
SMG9-210ENST00000600097 PODXL2Q9NZ53 605 aa22.26■■□□□ 1.15
SMG9-210ENST00000600097 TSKSQ9UJT2 592 aa22.26■■□□□ 1.15
SMG9-210ENST00000600097 HUNKP57058 714 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms