RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 ZBTB38Q8NAP3 1195 aaPredicted RBP16.37■□□□□ 0.21
SH2D3A-208ENST00000599563 GRAPLQ8TC17 118 aaPredicted RBP16.37■□□□□ 0.21
SH2D3A-208ENST00000599563 FAM89AQ96GI7 184 aa16.37■□□□□ 0.21
SH2D3A-208ENST00000599563 L3MBTL3Q96JM7 780 aaPredicted RBP16.37■□□□□ 0.21
SH2D3A-208ENST00000599563 METTL22Q9BUU2 404 aaPredicted RBP16.37■□□□□ 0.21
SH2D3A-208ENST00000599563 LRRC37AA6NMS7 1700 aa16.36■□□□□ 0.21
SH2D3A-208ENST00000599563 MYD88Q99836 296 aa16.36■□□□□ 0.21
SH2D3A-208ENST00000599563 CWC25Q9NXE8 425 aaPredicted RBP16.36■□□□□ 0.21
SH2D3A-208ENST00000599563 TAF1P21675 1872 aa16.35■□□□□ 0.21
SH2D3A-208ENST00000599563 MYH3P11055 1940 aa16.35■□□□□ 0.21
SH2D3A-208ENST00000599563 FZD9O00144 591 aa16.35■□□□□ 0.21
SH2D3A-208ENST00000599563 IRS4O14654 1257 aaPredicted RBP16.35■□□□□ 0.21
SH2D3A-208ENST00000599563 TCERG1O14776 1098 aaKnown RBP16.35■□□□□ 0.21
SH2D3A-208ENST00000599563 VAMP4O75379 141 aa16.35■□□□□ 0.21
SH2D3A-208ENST00000599563 DDNO94850 711 aaPredicted RBP16.35■□□□□ 0.21
SH2D3A-208ENST00000599563 LARGE2Q8N3Y3 721 aa16.35■□□□□ 0.21
SH2D3A-208ENST00000599563 SLC4A2P04920 1241 aa16.34■□□□□ 0.21
SH2D3A-208ENST00000599563 PCCAP05165 728 aaPredicted RBP16.34■□□□□ 0.21
SH2D3A-208ENST00000599563 EIF6P56537 245 aaKnown RBP16.34■□□□□ 0.21
SH2D3A-208ENST00000599563 DPP8Q6V1X1 898 aaPredicted RBP16.34■□□□□ 0.21
SH2D3A-208ENST00000599563 GPC2Q8N158 579 aa16.34■□□□□ 0.21
SH2D3A-208ENST00000599563 MAP3K2Q9Y2U5 619 aa16.34■□□□□ 0.21
SH2D3A-208ENST00000599563 PI4KAP2A4QPH2 592 aa16.33■□□□□ 0.2
SH2D3A-208ENST00000599563 POTECB2RU33 542 aa16.33■□□□□ 0.2
SH2D3A-208ENST00000599563 NIM1KQ8IY84 436 aa16.33■□□□□ 0.2
SH2D3A-208ENST00000599563 MPNDQ8N594 471 aa16.33■□□□□ 0.2
SH2D3A-208ENST00000599563 PI4KAP1Q8N8J0 262 aa16.33■□□□□ 0.2
SH2D3A-208ENST00000599563 RTFDC1Q9BY42 306 aaPredicted RBP16.33■□□□□ 0.2
SH2D3A-208ENST00000599563 PPIP5K2O43314 1243 aa16.32■□□□□ 0.2
SH2D3A-208ENST00000599563 CCDC152Q4G0S7 254 aa16.32■□□□□ 0.2
SH2D3A-208ENST00000599563 CDHR2Q9BYE9 1310 aa16.32■□□□□ 0.2
SH2D3A-208ENST00000599563 ZNF541Q9H0D2 1346 aa16.32■□□□□ 0.2
SH2D3A-208ENST00000599563 PDE8AO60658 829 aa16.31■□□□□ 0.2
SH2D3A-208ENST00000599563 RTL5Q5HYW3 569 aaPredicted RBP16.31■□□□□ 0.2
SH2D3A-208ENST00000599563 HACL1Q9UJ83 578 aa16.31■□□□□ 0.2
SH2D3A-208ENST00000599563 FLIIQ13045 1269 aa16.3■□□□□ 0.2
SH2D3A-208ENST00000599563 CHADLQ6NUI6 762 aa16.3■□□□□ 0.2
SH2D3A-208ENST00000599563 PNMA8AQ86V59 439 aaPredicted RBP16.3■□□□□ 0.2
SH2D3A-208ENST00000599563 BCL2L13Q9BXK5 485 aa16.3■□□□□ 0.2
SH2D3A-208ENST00000599563 CEP350Q5VT06 3117 aa16.3■□□□□ 0.2
SH2D3A-208ENST00000599563 RPS8P62241 208 aaKnown RBP16.29■□□□□ 0.2
SH2D3A-208ENST00000599563 KIAA2012Q0VF49 1180 aa16.29■□□□□ 0.2
SH2D3A-208ENST00000599563 FKBP5Q13451 457 aaPredicted RBP16.29■□□□□ 0.2
SH2D3A-208ENST00000599563 LDHDQ86WU2 507 aa16.29■□□□□ 0.2
SH2D3A-208ENST00000599563 TAF1DQ9H5J8 278 aaPredicted RBP16.29■□□□□ 0.2
SH2D3A-208ENST00000599563 ZNRF3Q9ULT6 936 aa16.29■□□□□ 0.2
SH2D3A-208ENST00000599563 COL4A5P29400 1685 aa16.28■□□□□ 0.2
SH2D3A-208ENST00000599563 IGKV5-2P06315 115 aa16.28■□□□□ 0.2
SH2D3A-208ENST00000599563 LMOD1P29536 600 aaPredicted RBP16.28■□□□□ 0.2
SH2D3A-208ENST00000599563 SSH1Q8WYL5 1049 aa16.28■□□□□ 0.2
SH2D3A-208ENST00000599563 ZNF428Q96B54 188 aa16.28■□□□□ 0.2
SH2D3A-208ENST00000599563 LTBP1Q14766 1721 aa16.28■□□□□ 0.2
SH2D3A-208ENST00000599563 DUOX1Q9NRD9 1551 aa16.27■□□□□ 0.2
SH2D3A-208ENST00000599563 NEURL1BA8MQ27 555 aa16.27■□□□□ 0.2
SH2D3A-208ENST00000599563 EPHX2P34913 555 aa16.27■□□□□ 0.2
SH2D3A-208ENST00000599563 RARSP54136 660 aaKnown RBP16.27■□□□□ 0.2
SH2D3A-208ENST00000599563 AOC3Q16853 763 aa16.27■□□□□ 0.2
SH2D3A-208ENST00000599563 G2E3Q7L622 706 aa16.27■□□□□ 0.2
SH2D3A-208ENST00000599563 LINS1Q8NG48 757 aa16.27■□□□□ 0.2
SH2D3A-208ENST00000599563 DNAAF4Q8WXU2 420 aa16.27■□□□□ 0.2
SH2D3A-208ENST00000599563 CELF1Q92879 486 aaKnown RBP16.27■□□□□ 0.2
SH2D3A-208ENST00000599563 EYA3Q99504 573 aa16.27■□□□□ 0.2
SH2D3A-208ENST00000599563 GJA3Q9Y6H8 435 aa16.27■□□□□ 0.2
SH2D3A-208ENST00000599563 RTL9Q8NET4 1388 aa16.26■□□□□ 0.19
SH2D3A-208ENST00000599563 ADAMTSL1Q8N6G6 1762 aa16.26■□□□□ 0.19
SH2D3A-208ENST00000599563 BCAR3O75815 825 aa16.26■□□□□ 0.19
SH2D3A-208ENST00000599563 CT47B1P0C2W7 299 aaPredicted RBP16.26■□□□□ 0.19
SH2D3A-208ENST00000599563 TNIP1Q15025 636 aa16.26■□□□□ 0.19
SH2D3A-208ENST00000599563 MRPL50Q8N5N7 158 aaKnown RBP16.26■□□□□ 0.19
SH2D3A-208ENST00000599563 CDC5LQ99459 802 aaKnown RBP16.26■□□□□ 0.19
SH2D3A-208ENST00000599563 NSFL1CQ9UNZ2 370 aaKnown RBP16.26■□□□□ 0.19
SH2D3A-208ENST00000599563 CTSWP56202 376 aa16.25■□□□□ 0.19
SH2D3A-208ENST00000599563 WASHC4Q2M389 1173 aa16.25■□□□□ 0.19
SH2D3A-208ENST00000599563 C6orf229H3BNL8 230 aa16.24■□□□□ 0.19
SH2D3A-208ENST00000599563 H7C1W4 665 aa16.24■□□□□ 0.19
SH2D3A-208ENST00000599563 GCKRQ14397 625 aa16.24■□□□□ 0.19
SH2D3A-208ENST00000599563 CWF19L2Q2TBE0 894 aaKnown RBP16.24■□□□□ 0.19
SH2D3A-208ENST00000599563 EAPPQ56P03 285 aaPredicted RBP16.24■□□□□ 0.19
SH2D3A-208ENST00000599563 ANKRD18AQ8IVF6 992 aa16.24■□□□□ 0.19
SH2D3A-208ENST00000599563 SMC4Q9NTJ3 1288 aa16.24■□□□□ 0.19
SH2D3A-208ENST00000599563 PODXL2Q9NZ53 605 aa16.24■□□□□ 0.19
SH2D3A-208ENST00000599563 RCAN3Q9UKA8 241 aa16.24■□□□□ 0.19
SH2D3A-208ENST00000599563 ALDH1L2Q3SY69 923 aa16.23■□□□□ 0.19
SH2D3A-208ENST00000599563 CIAPIN1Q6FI81 312 aa16.23■□□□□ 0.19
SH2D3A-208ENST00000599563 UBE3BQ7Z3V4 1068 aa16.23■□□□□ 0.19
SH2D3A-208ENST00000599563 SLC51AQ86UW1 340 aa16.23■□□□□ 0.19
SH2D3A-208ENST00000599563 DNAJC5GQ8N7S2 189 aa16.23■□□□□ 0.19
SH2D3A-208ENST00000599563 CLEC11AQ9Y240 323 aa16.23■□□□□ 0.19
SH2D3A-208ENST00000599563 SPEF2Q9C093 1822 aa16.23■□□□□ 0.19
SH2D3A-208ENST00000599563 GPSM2P81274 684 aa16.22■□□□□ 0.19
SH2D3A-208ENST00000599563 CXCL9Q07325 125 aa16.22■□□□□ 0.19
SH2D3A-208ENST00000599563 USP50Q70EL3 339 aaPredicted RBP16.22■□□□□ 0.19
SH2D3A-208ENST00000599563 TTLL11Q8NHH1 800 aa16.22■□□□□ 0.19
SH2D3A-208ENST00000599563 PLA2G12BQ9BX93 195 aa16.22■□□□□ 0.19
SH2D3A-208ENST00000599563 SEC31BQ9NQW1 1179 aa16.22■□□□□ 0.19
SH2D3A-208ENST00000599563 ANKIB1Q9P2G1 1089 aa16.22■□□□□ 0.19
SH2D3A-208ENST00000599563 TNNQ9UQP3 1299 aa16.22■□□□□ 0.19
SH2D3A-208ENST00000599563 XDHP47989 1333 aa16.21■□□□□ 0.19
SH2D3A-208ENST00000599563 SCNN1DP51172 638 aa16.21■□□□□ 0.19
SH2D3A-208ENST00000599563 TBC1D16Q8TBP0 767 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms