RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 BACH2Q9BYV9 841 aa28.8■■■□□ 2.2
SYMPK-212ENST00000598896 EZH2Q15910 746 aaKnown RBP28.79■■■□□ 2.2
SYMPK-212ENST00000598896 GREM2Q9H772 168 aa28.79■■■□□ 2.2
SYMPK-212ENST00000598896 TFCP2L1Q9NZI6 479 aa28.78■■■□□ 2.2
SYMPK-212ENST00000598896 GYS1P13807 737 aa28.78■■■□□ 2.2
SYMPK-212ENST00000598896 CCDC57Q2TAC2 916 aa28.78■■■□□ 2.2
SYMPK-212ENST00000598896 ERFEQ4G0M1 354 aa28.77■■■□□ 2.2
SYMPK-212ENST00000598896 CASZ1Q86V15 1759 aa28.76■■■□□ 2.2
SYMPK-212ENST00000598896 PDE1AP54750 535 aa28.76■■■□□ 2.2
SYMPK-212ENST00000598896 GSPT1P15170 499 aaKnown RBP28.76■■■□□ 2.19
SYMPK-212ENST00000598896 IFIT5Q13325 482 aaKnown RBP28.76■■■□□ 2.19
SYMPK-212ENST00000598896 NFIXQ14938 502 aa28.76■■■□□ 2.19
SYMPK-212ENST00000598896 BMP2KLQ5H9B9 411 aa28.76■■■□□ 2.19
SYMPK-212ENST00000598896 TSHZ3Q63HK5 1081 aa28.76■■■□□ 2.19
SYMPK-212ENST00000598896 ATG9AQ7Z3C6 839 aa28.76■■■□□ 2.19
SYMPK-212ENST00000598896 ABCC12Q96J65 1359 aa28.75■■■□□ 2.19
SYMPK-212ENST00000598896 MX1P20591 662 aa28.75■■■□□ 2.19
SYMPK-212ENST00000598896 ITGA6P23229 1130 aa28.75■■■□□ 2.19
SYMPK-212ENST00000598896 OSBPL3Q9H4L5 887 aa28.75■■■□□ 2.19
SYMPK-212ENST00000598896 CLASRPQ8N2M8 674 aaKnown RBP28.74■■■□□ 2.19
SYMPK-212ENST00000598896 LRRC24Q50LG9 513 aa28.74■■■□□ 2.19
SYMPK-212ENST00000598896 TTC22Q5TAA0 569 aa28.74■■■□□ 2.19
SYMPK-212ENST00000598896 NBPF5PQ86XG9 351 aaPredicted RBP28.74■■■□□ 2.19
SYMPK-212ENST00000598896 PUS3Q9BZE2 481 aaKnown RBP28.73■■■□□ 2.19
SYMPK-212ENST00000598896 CARMIL3Q8ND23 1372 aa28.73■■■□□ 2.19
SYMPK-212ENST00000598896 EYA2O00167 538 aa28.72■■■□□ 2.19
SYMPK-212ENST00000598896 TFCP2Q12800 502 aa28.72■■■□□ 2.19
SYMPK-212ENST00000598896 COL23A1Q86Y22 540 aaPredicted RBP28.72■■■□□ 2.19
SYMPK-212ENST00000598896 NYXQ9GZU5 481 aa28.72■■■□□ 2.19
SYMPK-212ENST00000598896 C3orf67Q6ZVT6 689 aa28.72■■■□□ 2.19
SYMPK-212ENST00000598896 EAF2Q96CJ1 260 aaPredicted RBP28.72■■■□□ 2.19
SYMPK-212ENST00000598896 ANO8Q9HCE9 1232 aaPredicted RBP28.72■■■□□ 2.19
SYMPK-212ENST00000598896 STAP2Q9UGK3 403 aa28.72■■■□□ 2.19
SYMPK-212ENST00000598896 DEFB132Q7Z7B7 95 aa28.71■■■□□ 2.19
SYMPK-212ENST00000598896 LRP5O75197 1615 aa28.7■■■□□ 2.19
SYMPK-212ENST00000598896 ANKRD18BA2A2Z9 1011 aa28.7■■■□□ 2.19
SYMPK-212ENST00000598896 CIAO1O76071 339 aa28.7■■■□□ 2.19
SYMPK-212ENST00000598896 HSP90B1P14625 803 aaKnown RBP28.7■■■□□ 2.19
SYMPK-212ENST00000598896 GTF2E1P29083 439 aaPredicted RBP28.7■■■□□ 2.18
SYMPK-212ENST00000598896 SLC10A5Q5PT55 438 aa28.7■■■□□ 2.18
SYMPK-212ENST00000598896 AACSQ86V21 672 aa28.7■■■□□ 2.18
SYMPK-212ENST00000598896 PNPLA7Q6ZV29 1317 aa28.69■■■□□ 2.18
SYMPK-212ENST00000598896 IL15P40933 162 aaPredicted RBP28.69■■■□□ 2.18
SYMPK-212ENST00000598896 SF3B2Q13435 895 aaKnown RBP28.69■■■□□ 2.18
SYMPK-212ENST00000598896 TAF7LQ5H9L4 462 aa28.69■■■□□ 2.18
SYMPK-212ENST00000598896 TPTE2Q6XPS3 522 aa28.69■■■□□ 2.18
SYMPK-212ENST00000598896 CCDC24Q8N4L8 307 aa28.68■■■□□ 2.18
SYMPK-212ENST00000598896 COL4A1P02462 1669 aa28.68■■■□□ 2.18
SYMPK-212ENST00000598896 RTL9Q8NET4 1388 aa28.68■■■□□ 2.18
SYMPK-212ENST00000598896 BAG6P46379 1132 aa28.68■■■□□ 2.18
SYMPK-212ENST00000598896 CCDC152Q4G0S7 254 aa28.68■■■□□ 2.18
SYMPK-212ENST00000598896 TLR7Q9NYK1 1049 aaKnown RBP28.68■■■□□ 2.18
SYMPK-212ENST00000598896 FBXO3Q9UK99 471 aa28.68■■■□□ 2.18
SYMPK-212ENST00000598896 TNRC6CQ9HCJ0 1690 aaKnown RBP28.67■■■□□ 2.18
SYMPK-212ENST00000598896 TM4SF1P30408 202 aa28.67■■■□□ 2.18
SYMPK-212ENST00000598896 SEC31BQ9NQW1 1179 aa28.67■■■□□ 2.18
SYMPK-212ENST00000598896 IFIT2P09913 472 aaKnown RBP28.66■■■□□ 2.18
SYMPK-212ENST00000598896 TNNI3KQ59H18 835 aa28.66■■■□□ 2.18
SYMPK-212ENST00000598896 CCDC8Q9H0W5 538 aaPredicted RBP28.66■■■□□ 2.18
SYMPK-212ENST00000598896 FPGT-TNNI3KV9GXZ4 949 aa28.66■■■□□ 2.18
SYMPK-212ENST00000598896 AOX1Q06278 1338 aa28.66■■■□□ 2.18
SYMPK-212ENST00000598896 PI4K2BQ8TCG2 481 aa28.66■■■□□ 2.18
SYMPK-212ENST00000598896 RIC1Q4ADV7 1423 aa28.65■■■□□ 2.18
SYMPK-212ENST00000598896 MSH5O43196 834 aa28.65■■■□□ 2.18
SYMPK-212ENST00000598896 FLAD1Q8NFF5 587 aa28.65■■■□□ 2.18
SYMPK-212ENST00000598896 RBM19Q9Y4C8 960 aaKnown RBP28.65■■■□□ 2.18
SYMPK-212ENST00000598896 SPEF2Q9C093 1822 aa28.64■■■□□ 2.18
SYMPK-212ENST00000598896 DDR1Q08345 913 aa28.64■■■□□ 2.18
SYMPK-212ENST00000598896 SF3B3Q15393 1217 aaKnown RBP28.64■■■□□ 2.18
SYMPK-212ENST00000598896 SLC15A2Q16348 729 aa28.64■■■□□ 2.18
SYMPK-212ENST00000598896 LDHAL6AQ6ZMR3 332 aa28.64■■■□□ 2.18
SYMPK-212ENST00000598896 RIPOR2Q9Y4F9 1068 aa28.64■■■□□ 2.18
SYMPK-212ENST00000598896 SDSP20132 328 aa28.63■■■□□ 2.17
SYMPK-212ENST00000598896 CNBD1Q8NA66 436 aa28.63■■■□□ 2.17
SYMPK-212ENST00000598896 TAF1P21675 1872 aa28.63■■■□□ 2.17
SYMPK-212ENST00000598896 SEC24BO95487 1268 aa28.62■■■□□ 2.17
SYMPK-212ENST00000598896 DBNLQ9UJU6 430 aaKnown RBP28.62■■■□□ 2.17
SYMPK-212ENST00000598896 TTC41PQ6P2S7 1318 aa28.62■■■□□ 2.17
SYMPK-212ENST00000598896 NPHP1O15259 732 aa28.61■■■□□ 2.17
SYMPK-212ENST00000598896 PRR5LQ6MZQ0 368 aa28.61■■■□□ 2.17
SYMPK-212ENST00000598896 ZNF609O15014 1411 aa28.61■■■□□ 2.17
SYMPK-212ENST00000598896 QSER1Q2KHR3 1735 aa28.61■■■□□ 2.17
SYMPK-212ENST00000598896 POLRMTO00411 1230 aaKnown RBP28.61■■■□□ 2.17
SYMPK-212ENST00000598896 SERPINB2P05120 415 aa28.61■■■□□ 2.17
SYMPK-212ENST00000598896 CNNM1Q9NRU3 951 aa28.61■■■□□ 2.17
SYMPK-212ENST00000598896 ECHDC1Q9NTX5 307 aa28.61■■■□□ 2.17
SYMPK-212ENST00000598896 NLRP3Q96P20 1036 aa28.6■■■□□ 2.17
SYMPK-212ENST00000598896 GPR108Q9NPR9 543 aa28.6■■■□□ 2.17
SYMPK-212ENST00000598896 STK32BQ9NY57 414 aa28.59■■■□□ 2.17
SYMPK-212ENST00000598896 CEP126Q9P2H0 1117 aa28.59■■■□□ 2.17
SYMPK-212ENST00000598896 NLGN1Q8N2Q7 840 aa28.59■■■□□ 2.17
SYMPK-212ENST00000598896 DBNDD2Q9BQY9 259 aa28.58■■■□□ 2.17
SYMPK-212ENST00000598896 TIMM10P62072 90 aa28.57■■■□□ 2.16
SYMPK-212ENST00000598896 METTL24Q5JXM2 366 aa28.57■■■□□ 2.16
SYMPK-212ENST00000598896 VGLL2Q8N8G2 317 aa28.57■■■□□ 2.16
SYMPK-212ENST00000598896 GPATCH3Q96I76 525 aa28.57■■■□□ 2.16
SYMPK-212ENST00000598896 A0A1B0GUL7 405 aa28.56■■■□□ 2.16
SYMPK-212ENST00000598896 GLRX3O76003 335 aaKnown RBP28.56■■■□□ 2.16
SYMPK-212ENST00000598896 TBC1D9Q6ZT07 1266 aa28.56■■■□□ 2.16
SYMPK-212ENST00000598896 MPHOSPH8Q99549 860 aa28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms