RNA–Protein interactions for RNA: ENST00000598895.5

ZNF548-209, Transcript of zinc finger protein 548, humanhuman

TSL 4 BASIC

Gene ZNF548, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-209ENST00000598895 LINS1Q8NG48 757 aa15.33■□□□□ 0.04
ZNF548-209ENST00000598895 ANP32EQ9BTT0 268 aa15.33■□□□□ 0.04
ZNF548-209ENST00000598895 GPBP1L1Q9HC44 474 aaPredicted RBP15.33■□□□□ 0.04
ZNF548-209ENST00000598895 ZNF277Q9NRM2 450 aaPredicted RBP15.33■□□□□ 0.04
ZNF548-209ENST00000598895 PDE8AO60658 829 aa15.32■□□□□ 0.04
ZNF548-209ENST00000598895 FKBP4Q02790 459 aaKnown RBP eCLIP15.32■□□□□ 0.04
ZNF548-209ENST00000598895 GRAPQ13588 217 aa15.32■□□□□ 0.04
ZNF548-209ENST00000598895 BEND3Q5T5X7 828 aa15.32■□□□□ 0.04
ZNF548-209ENST00000598895 RTKN2Q8IZC4 609 aa15.32■□□□□ 0.04
ZNF548-209ENST00000598895 GRAPLQ8TC17 118 aaPredicted RBP15.32■□□□□ 0.04
ZNF548-209ENST00000598895 CELF1Q92879 486 aaKnown RBP15.32■□□□□ 0.04
ZNF548-209ENST00000598895 SEC31BQ9NQW1 1179 aa15.32■□□□□ 0.04
ZNF548-209ENST00000598895 MYH3P11055 1940 aa15.32■□□□□ 0.04
ZNF548-209ENST00000598895 DICER1Q9UPY3 1922 aaKnown RBP15.32■□□□□ 0.04
ZNF548-209ENST00000598895 CDHR2Q9BYE9 1310 aa15.32■□□□□ 0.04
ZNF548-209ENST00000598895 SPEF2Q9C093 1822 aa15.31■□□□□ 0.04
ZNF548-209ENST00000598895 TMX4Q9H1E5 349 aaPredicted RBP15.31■□□□□ 0.04
ZNF548-209ENST00000598895 ATP6V0A2Q9Y487 856 aa15.31■□□□□ 0.04
ZNF548-209ENST00000598895 LTBP3Q9NS15 1303 aa15.31■□□□□ 0.04
ZNF548-209ENST00000598895 H7C1W4 665 aa15.3■□□□□ 0.04
ZNF548-209ENST00000598895 BBOX1O75936 387 aa15.3■□□□□ 0.04
ZNF548-209ENST00000598895 ALDH1L2Q3SY69 923 aa15.3■□□□□ 0.04
ZNF548-209ENST00000598895 SNED1Q8TER0 1413 aa15.3■□□□□ 0.04
ZNF548-209ENST00000598895 HSP90B1P14625 803 aaKnown RBP15.29■□□□□ 0.04
ZNF548-209ENST00000598895 CTSWP56202 376 aa15.29■□□□□ 0.04
ZNF548-209ENST00000598895 CCDC152Q4G0S7 254 aa15.29■□□□□ 0.04
ZNF548-209ENST00000598895 CC2D2BQ6DHV5 1058 aa15.29■□□□□ 0.04
ZNF548-209ENST00000598895 SRCIN1Q9C0H9 1055 aa15.29■□□□□ 0.04
ZNF548-209ENST00000598895 NMRK2Q9NPI5 230 aa15.29■□□□□ 0.04
ZNF548-209ENST00000598895 LRRC37AA6NMS7 1700 aa15.29■□□□□ 0.04
ZNF548-209ENST00000598895 PTPRCP08575 1304 aa15.28■□□□□ 0.04
ZNF548-209ENST00000598895 ZBED9Q6R2W3 1325 aa15.28■□□□□ 0.04
ZNF548-209ENST00000598895 IARSP41252 1262 aaKnown RBP15.28■□□□□ 0.04
ZNF548-209ENST00000598895 CASP7P55210 303 aa15.28■□□□□ 0.04
ZNF548-209ENST00000598895 SP8Q8IXZ3 490 aa15.28■□□□□ 0.04
ZNF548-209ENST00000598895 NOB1Q9ULX3 412 aaKnown RBP15.28■□□□□ 0.04
ZNF548-209ENST00000598895 CT47B1P0C2W7 299 aaPredicted RBP15.27■□□□□ 0.04
ZNF548-209ENST00000598895 RARSP54136 660 aaKnown RBP15.27■□□□□ 0.04
ZNF548-209ENST00000598895 DPP8Q6V1X1 898 aaPredicted RBP15.27■□□□□ 0.04
ZNF548-209ENST00000598895 MPNDQ8N594 471 aa15.27■□□□□ 0.04
ZNF548-209ENST00000598895 TTLL11Q8NHH1 800 aa15.27■□□□□ 0.04
ZNF548-209ENST00000598895 PSMD1Q99460 953 aa15.27■□□□□ 0.04
ZNF548-209ENST00000598895 GREM2Q9H772 168 aa15.27■□□□□ 0.04
ZNF548-209ENST00000598895 C9orf78Q9NZ63 289 aaPredicted RBP15.27■□□□□ 0.04
ZNF548-209ENST00000598895 COL4A5P29400 1685 aa15.27■□□□□ 0.03
ZNF548-209ENST00000598895 KDM2BQ8NHM5 1336 aa15.26■□□□□ 0.03
ZNF548-209ENST00000598895 GRM8O00222 908 aa15.26■□□□□ 0.03
ZNF548-209ENST00000598895 RPS8P62241 208 aaKnown RBP15.26■□□□□ 0.03
ZNF548-209ENST00000598895 AOC3Q16853 763 aa15.26■□□□□ 0.03
ZNF548-209ENST00000598895 RRAGCQ9HB90 399 aa15.26■□□□□ 0.03
ZNF548-209ENST00000598895 NSFL1CQ9UNZ2 370 aaKnown RBP15.26■□□□□ 0.03
ZNF548-209ENST00000598895 DUOX1Q9NRD9 1551 aa15.25■□□□□ 0.03
ZNF548-209ENST00000598895 PPIP5K2O43314 1243 aa15.25■□□□□ 0.03
ZNF548-209ENST00000598895 ALDH1L1O75891 902 aa15.25■□□□□ 0.03
ZNF548-209ENST00000598895 GPSM2P81274 684 aa15.25■□□□□ 0.03
ZNF548-209ENST00000598895 FAM161AQ3B820 660 aa15.25■□□□□ 0.03
ZNF548-209ENST00000598895 ANKRD18AQ8IVF6 992 aa15.25■□□□□ 0.03
ZNF548-209ENST00000598895 LARGE2Q8N3Y3 721 aa15.25■□□□□ 0.03
ZNF548-209ENST00000598895 CHMP3Q9Y3E7 222 aa15.25■□□□□ 0.03
ZNF548-209ENST00000598895 ZNF541Q9H0D2 1346 aa15.24■□□□□ 0.03
ZNF548-209ENST00000598895 ZC3H4Q9UPT8 1303 aaKnown RBP15.24■□□□□ 0.03
ZNF548-209ENST00000598895 GLTPD2A6NH11 291 aa15.24■□□□□ 0.03
ZNF548-209ENST00000598895 BCAR3O75815 825 aa15.24■□□□□ 0.03
ZNF548-209ENST00000598895 DDNO94850 711 aaPredicted RBP15.24■□□□□ 0.03
ZNF548-209ENST00000598895 GRIPAP1Q4V328 841 aa15.24■□□□□ 0.03
ZNF548-209ENST00000598895 EPHA10Q5JZY3 1008 aa15.24■□□□□ 0.03
ZNF548-209ENST00000598895 TMC4Q7Z404 712 aa15.24■□□□□ 0.03
ZNF548-209ENST00000598895 FRAT1Q92837 279 aaPredicted RBP15.24■□□□□ 0.03
ZNF548-209ENST00000598895 GPR101Q96P66 508 aaPredicted RBP15.24■□□□□ 0.03
ZNF548-209ENST00000598895 RBM19Q9Y4C8 960 aaKnown RBP15.24■□□□□ 0.03
ZNF548-209ENST00000598895 C6orf229H3BNL8 230 aa15.23■□□□□ 0.03
ZNF548-209ENST00000598895 KIF3CO14782 793 aa15.23■□□□□ 0.03
ZNF548-209ENST00000598895 NBPF7P0C2Y1 421 aaPredicted RBP15.23■□□□□ 0.03
ZNF548-209ENST00000598895 FOXO4P98177 505 aa15.23■□□□□ 0.03
ZNF548-209ENST00000598895 DPY19L2Q6NUT2 758 aa15.23■□□□□ 0.03
ZNF548-209ENST00000598895 SUPT20HQ8NEM7 779 aa15.23■□□□□ 0.03
ZNF548-209ENST00000598895 JDP2Q8WYK2 163 aa15.23■□□□□ 0.03
ZNF548-209ENST00000598895 CDC5LQ99459 802 aaKnown RBP15.23■□□□□ 0.03
ZNF548-209ENST00000598895 PLA2G12BQ9BX93 195 aa15.23■□□□□ 0.03
ZNF548-209ENST00000598895 PPP4R2Q9NY27 417 aa15.23■□□□□ 0.03
ZNF548-209ENST00000598895 LTBP1Q14766 1721 aa15.23■□□□□ 0.03
ZNF548-209ENST00000598895 RIMBP2O15034 1052 aa15.22■□□□□ 0.03
ZNF548-209ENST00000598895 ITGA6P23229 1130 aa15.22■□□□□ 0.03
ZNF548-209ENST00000598895 LMBR1LQ6UX01 489 aa15.22■□□□□ 0.03
ZNF548-209ENST00000598895 SUCLG2Q96I99 432 aa15.22■□□□□ 0.03
ZNF548-209ENST00000598895 ANKIB1Q9P2G1 1089 aa15.22■□□□□ 0.03
ZNF548-209ENST00000598895 TNNQ9UQP3 1299 aa15.22■□□□□ 0.03
ZNF548-209ENST00000598895 KIF16BQ96L93 1317 aa15.21■□□□□ 0.03
ZNF548-209ENST00000598895 CSF1RP07333 972 aa15.21■□□□□ 0.03
ZNF548-209ENST00000598895 NIM1KQ8IY84 436 aa15.21■□□□□ 0.03
ZNF548-209ENST00000598895 RTFDC1Q9BY42 306 aaPredicted RBP15.21■□□□□ 0.03
ZNF548-209ENST00000598895 API5Q9BZZ5 524 aaKnown RBP15.21■□□□□ 0.03
ZNF548-209ENST00000598895 POLLQ9UGP5 575 aa15.21■□□□□ 0.03
ZNF548-209ENST00000598895 RTL9Q8NET4 1388 aa15.21■□□□□ 0.02
ZNF548-209ENST00000598895 WDR90Q96KV7 1748 aa15.2■□□□□ 0.02
ZNF548-209ENST00000598895 ANKRD18BA2A2Z9 1011 aa15.2■□□□□ 0.02
ZNF548-209ENST00000598895 IGHMBP2P38935 993 aaKnown RBP15.2■□□□□ 0.02
ZNF548-209ENST00000598895 TBC1D16Q8TBP0 767 aa15.2■□□□□ 0.02
ZNF548-209ENST00000598895 GJA3Q9Y6H8 435 aa15.2■□□□□ 0.02
ZNF548-209ENST00000598895 WTIPA6NIX2 430 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms