RNA–Protein interactions for RNA: ENST00000598452.1

SNRPA-204, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-204ENST00000598452 HYPKQ9NX55 129 aa24.54■■□□□ 1.52
SNRPA-204ENST00000598452 LAMB2P55268 1798 aa24.54■■□□□ 1.52
SNRPA-204ENST00000598452 ELL2O00472 640 aaPredicted RBP24.53■■□□□ 1.52
SNRPA-204ENST00000598452 CXCL9Q07325 125 aa24.53■■□□□ 1.52
SNRPA-204ENST00000598452 RTL5Q5HYW3 569 aaPredicted RBP24.53■■□□□ 1.52
SNRPA-204ENST00000598452 VPS33BQ9H267 617 aa24.53■■□□□ 1.52
SNRPA-204ENST00000598452 ZNRF3Q9ULT6 936 aa24.53■■□□□ 1.52
SNRPA-204ENST00000598452 VEGFBP49765 207 aa24.52■■□□□ 1.52
SNRPA-204ENST00000598452 FMR1Q06787 632 aaKnown RBP eCLIP24.52■■□□□ 1.52
SNRPA-204ENST00000598452 TNS4Q8IZW8 715 aa24.52■■□□□ 1.52
SNRPA-204ENST00000598452 IFT57Q9NWB7 429 aa24.51■■□□□ 1.51
SNRPA-204ENST00000598452 KIAA2012Q0VF49 1180 aa24.5■■□□□ 1.51
SNRPA-204ENST00000598452 CELF1Q92879 486 aaKnown RBP24.5■■□□□ 1.51
SNRPA-204ENST00000598452 PHAXQ9H814 394 aaKnown RBP24.5■■□□□ 1.51
SNRPA-204ENST00000598452 GNAI1P63096 354 aa24.49■■□□□ 1.51
SNRPA-204ENST00000598452 USP50Q70EL3 339 aaPredicted RBP24.49■■□□□ 1.51
SNRPA-204ENST00000598452 GPRC5DQ9NZD1 345 aa24.49■■□□□ 1.51
SNRPA-204ENST00000598452 RAD17O75943 681 aa24.48■■□□□ 1.51
SNRPA-204ENST00000598452 TAF1P21675 1872 aa24.48■■□□□ 1.51
SNRPA-204ENST00000598452 GMPSP49915 693 aaPredicted RBP24.48■■□□□ 1.51
SNRPA-204ENST00000598452 SF3B3Q15393 1217 aaKnown RBP24.48■■□□□ 1.51
SNRPA-204ENST00000598452 RIC3Q7Z5B4 369 aa24.48■■□□□ 1.51
SNRPA-204ENST00000598452 C8orf58Q8NAV2 365 aa24.48■■□□□ 1.51
SNRPA-204ENST00000598452 CAPN15O75808 1086 aa24.47■■□□□ 1.51
SNRPA-204ENST00000598452 TRIM28Q13263 835 aaKnown RBP24.47■■□□□ 1.51
SNRPA-204ENST00000598452 CCDC184Q52MB2 194 aa24.47■■□□□ 1.51
SNRPA-204ENST00000598452 CIAPIN1Q6FI81 312 aa24.47■■□□□ 1.51
SNRPA-204ENST00000598452 DDX60Q8IY21 1712 aaKnown RBP24.47■■□□□ 1.51
SNRPA-204ENST00000598452 RASSF10A6NK89 507 aa24.46■■□□□ 1.51
SNRPA-204ENST00000598452 IRS4O14654 1257 aaPredicted RBP24.46■■□□□ 1.51
SNRPA-204ENST00000598452 CALD1Q05682 793 aaKnown RBP24.46■■□□□ 1.51
SNRPA-204ENST00000598452 GOLGA2Q08379 1002 aa24.46■■□□□ 1.51
SNRPA-204ENST00000598452 TMC4Q7Z404 712 aa24.46■■□□□ 1.51
SNRPA-204ENST00000598452 ADARB2Q9NS39 739 aaKnown RBP24.46■■□□□ 1.51
SNRPA-204ENST00000598452 ABT1Q9ULW3 272 aaKnown RBP24.46■■□□□ 1.51
SNRPA-204ENST00000598452 YDJCA8MPS7 323 aa24.45■■□□□ 1.5
SNRPA-204ENST00000598452 TRAF5O00463 557 aa24.45■■□□□ 1.5
SNRPA-204ENST00000598452 FOXN1O15353 648 aa24.45■■□□□ 1.5
SNRPA-204ENST00000598452 DEFB115Q30KQ5 88 aa24.45■■□□□ 1.5
SNRPA-204ENST00000598452 NSFL1CQ9UNZ2 370 aaKnown RBP24.45■■□□□ 1.5
SNRPA-204ENST00000598452 COL4A1P02462 1669 aa24.45■■□□□ 1.5
SNRPA-204ENST00000598452 DUOX1Q9NRD9 1551 aa24.45■■□□□ 1.5
SNRPA-204ENST00000598452 MYD88Q99836 296 aa24.44■■□□□ 1.5
SNRPA-204ENST00000598452 JARID2Q92833 1246 aaPredicted RBP24.43■■□□□ 1.5
SNRPA-204ENST00000598452 BCL2L13Q9BXK5 485 aa24.43■■□□□ 1.5
SNRPA-204ENST00000598452 SHTN1A0MZ66 631 aa24.42■■□□□ 1.5
SNRPA-204ENST00000598452 RIMBP2O15034 1052 aa24.42■■□□□ 1.5
SNRPA-204ENST00000598452 GPSM2P81274 684 aa24.42■■□□□ 1.5
SNRPA-204ENST00000598452 TNIP1Q15025 636 aa24.42■■□□□ 1.5
SNRPA-204ENST00000598452 TSPYL6Q8N831 410 aa24.42■■□□□ 1.5
SNRPA-204ENST00000598452 ZBTB38Q8NAP3 1195 aaPredicted RBP24.42■■□□□ 1.5
SNRPA-204ENST00000598452 CHMP4AQ9BY43 222 aa24.42■■□□□ 1.5
SNRPA-204ENST00000598452 WASHC4Q2M389 1173 aa24.41■■□□□ 1.5
SNRPA-204ENST00000598452 CST9Q5W186 159 aa24.41■■□□□ 1.5
SNRPA-204ENST00000598452 SEC31BQ9NQW1 1179 aa24.41■■□□□ 1.5
SNRPA-204ENST00000598452 POLLQ9UGP5 575 aa24.41■■□□□ 1.5
SNRPA-204ENST00000598452 C6orf229H3BNL8 230 aa24.4■■□□□ 1.5
SNRPA-204ENST00000598452 HIRAP54198 1017 aaPredicted RBP24.4■■□□□ 1.5
SNRPA-204ENST00000598452 RPS8P62241 208 aaKnown RBP24.4■■□□□ 1.5
SNRPA-204ENST00000598452 GPR101Q96P66 508 aaPredicted RBP24.4■■□□□ 1.5
SNRPA-204ENST00000598452 DBNDD1Q9H9R9 158 aa24.4■■□□□ 1.5
SNRPA-204ENST00000598452 LRRC37AA6NMS7 1700 aa24.4■■□□□ 1.5
SNRPA-204ENST00000598452 WDR33Q9C0J8 1336 aaKnown RBP24.39■■□□□ 1.5
SNRPA-204ENST00000598452 TRPM4Q8TD43 1214 aa24.39■■□□□ 1.49
SNRPA-204ENST00000598452 TSR2Q969E8 191 aaKnown RBP24.39■■□□□ 1.49
SNRPA-204ENST00000598452 AIDAQ96BJ3 306 aa24.39■■□□□ 1.49
SNRPA-204ENST00000598452 GLIS2Q9BZE0 524 aaPredicted RBP24.39■■□□□ 1.49
SNRPA-204ENST00000598452 WBP1LQ9NX94 342 aa24.39■■□□□ 1.49
SNRPA-204ENST00000598452 CNOT7Q9UIV1 285 aaKnown RBP24.39■■□□□ 1.49
SNRPA-204ENST00000598452 ZBTB12Q9Y330 459 aaPredicted RBP24.39■■□□□ 1.49
SNRPA-204ENST00000598452 CCDC30Q5VVM6 783 aa24.38■■□□□ 1.49
SNRPA-204ENST00000598452 PSMD14O00487 310 aa24.37■■□□□ 1.49
SNRPA-204ENST00000598452 DOK7Q18PE1 504 aa24.37■■□□□ 1.49
SNRPA-204ENST00000598452 PAXIP1Q6ZW49 1069 aaPredicted RBP24.37■■□□□ 1.49
SNRPA-204ENST00000598452 CCDC191Q8NCU4 936 aa24.37■■□□□ 1.49
SNRPA-204ENST00000598452 CCDC85AQ96PX6 553 aaPredicted RBP24.37■■□□□ 1.49
SNRPA-204ENST00000598452 METTL22Q9BUU2 404 aaPredicted RBP24.37■■□□□ 1.49
SNRPA-204ENST00000598452 KCNQ5Q9NR82 932 aa24.37■■□□□ 1.49
SNRPA-204ENST00000598452 CDHR2Q9BYE9 1310 aa24.36■■□□□ 1.49
SNRPA-204ENST00000598452 PCCAP05165 728 aaPredicted RBP24.36■■□□□ 1.49
SNRPA-204ENST00000598452 CTCFP49711 727 aaPredicted RBP24.36■■□□□ 1.49
SNRPA-204ENST00000598452 GRM1Q13255 1194 aa24.36■■□□□ 1.49
SNRPA-204ENST00000598452 MICALL2Q8IY33 904 aa24.36■■□□□ 1.49
SNRPA-204ENST00000598452 TBC1D16Q8TBP0 767 aa24.36■■□□□ 1.49
SNRPA-204ENST00000598452 CWC25Q9NXE8 425 aaPredicted RBP24.36■■□□□ 1.49
SNRPA-204ENST00000598452 PGAP2Q9UHJ9 254 aa24.36■■□□□ 1.49
SNRPA-204ENST00000598452 MAP3K2Q9Y2U5 619 aa24.36■■□□□ 1.49
SNRPA-204ENST00000598452 DDX58O95786 925 aaKnown RBP24.35■■□□□ 1.49
SNRPA-204ENST00000598452 CYP4F22Q6NT55 531 aa24.35■■□□□ 1.49
SNRPA-204ENST00000598452 CAPNS2Q96L46 248 aa24.35■■□□□ 1.49
SNRPA-204ENST00000598452 ECE2O60344 883 aa24.34■■□□□ 1.49
SNRPA-204ENST00000598452 CELF2O95319 508 aaKnown RBP24.34■■□□□ 1.49
SNRPA-204ENST00000598452 TLL2Q9Y6L7 1015 aa24.34■■□□□ 1.49
SNRPA-204ENST00000598452 H7C1D1 291 aa24.33■■□□□ 1.49
SNRPA-204ENST00000598452 PDE8AO60658 829 aa24.33■■□□□ 1.49
SNRPA-204ENST00000598452 HSP90B1P14625 803 aaKnown RBP24.33■■□□□ 1.49
SNRPA-204ENST00000598452 LBX1P52954 281 aa24.33■■□□□ 1.49
SNRPA-204ENST00000598452 CCDC152Q4G0S7 254 aa24.33■■□□□ 1.49
SNRPA-204ENST00000598452 SAMD7Q7Z3H4 446 aa24.33■■□□□ 1.49
SNRPA-204ENST00000598452 WWC1Q8IX03 1113 aa24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms