RNA–Protein interactions for RNA: ENST00000598229.1

LINC00343-205, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-205ENST00000598229 ZNF541Q9H0D2 1346 aa12.64□□□□□ -0.39
LINC00343-205ENST00000598229 SCN11AQ9UI33 1791 aa12.64□□□□□ -0.39
LINC00343-205ENST00000598229 NPR1P16066 1061 aa12.64□□□□□ -0.39
LINC00343-205ENST00000598229 DMRTA1Q5VZB9 504 aa12.64□□□□□ -0.39
LINC00343-205ENST00000598229 HCSTQ9UBK5 93 aa12.64□□□□□ -0.39
LINC00343-205ENST00000598229 TBC1D2BQ9UPU7 963 aa12.64□□□□□ -0.39
LINC00343-205ENST00000598229 ADAMTSL1Q8N6G6 1762 aa12.64□□□□□ -0.39
LINC00343-205ENST00000598229 ANKRD31Q8N7Z5 1873 aa12.63□□□□□ -0.39
LINC00343-205ENST00000598229 NPHP1O15259 732 aa12.63□□□□□ -0.39
LINC00343-205ENST00000598229 CAMTA2O94983 1202 aa12.63□□□□□ -0.39
LINC00343-205ENST00000598229 TTC5Q8N0Z6 440 aa12.63□□□□□ -0.39
LINC00343-205ENST00000598229 ZNF277Q9NRM2 450 aaPredicted RBP12.63□□□□□ -0.39
LINC00343-205ENST00000598229 SLX4Q8IY92 1834 aa12.62□□□□□ -0.39
LINC00343-205ENST00000598229 HRO43593 1189 aa12.62□□□□□ -0.39
LINC00343-205ENST00000598229 CLEC4GQ6UXB4 293 aa12.62□□□□□ -0.39
LINC00343-205ENST00000598229 NPM2Q86SE8 214 aaKnown RBP12.62□□□□□ -0.39
LINC00343-205ENST00000598229 MORC1Q86VD1 984 aa12.62□□□□□ -0.39
LINC00343-205ENST00000598229 RNF123Q5XPI4 1314 aa12.62□□□□□ -0.39
LINC00343-205ENST00000598229 CST9Q5W186 159 aa12.61□□□□□ -0.39
LINC00343-205ENST00000598229 ZNF496Q96IT1 587 aaPredicted RBP12.61□□□□□ -0.39
LINC00343-205ENST00000598229 KCNK17Q96T54 332 aa12.61□□□□□ -0.39
LINC00343-205ENST00000598229 MCOLN1Q9GZU1 580 aa12.61□□□□□ -0.39
LINC00343-205ENST00000598229 TLL2Q9Y6L7 1015 aa12.61□□□□□ -0.39
LINC00343-205ENST00000598229 COL11A2P13942 1736 aaPredicted RBP12.6□□□□□ -0.39
LINC00343-205ENST00000598229 HEG1Q9ULI3 1381 aa12.6□□□□□ -0.39
LINC00343-205ENST00000598229 ALDH1B1P30837 517 aa12.6□□□□□ -0.39
LINC00343-205ENST00000598229 IARSP41252 1262 aaKnown RBP12.6□□□□□ -0.39
LINC00343-205ENST00000598229 MTHFSDQ2M296 383 aaKnown RBP12.6□□□□□ -0.39
LINC00343-205ENST00000598229 CYP4F22Q6NT55 531 aa12.6□□□□□ -0.39
LINC00343-205ENST00000598229 ZNF790Q6PG37 636 aa12.6□□□□□ -0.39
LINC00343-205ENST00000598229 NBPF5PQ86XG9 351 aaPredicted RBP12.6□□□□□ -0.39
LINC00343-205ENST00000598229 SYNE4Q8N205 404 aa12.6□□□□□ -0.39
LINC00343-205ENST00000598229 ZNF454Q8N9F8 522 aa12.6□□□□□ -0.39
LINC00343-205ENST00000598229 JDP2Q8WYK2 163 aa12.6□□□□□ -0.39
LINC00343-205ENST00000598229 HHIPL1Q96JK4 782 aa12.6□□□□□ -0.39
LINC00343-205ENST00000598229 PSMD1Q99460 953 aa12.6□□□□□ -0.39
LINC00343-205ENST00000598229 THSD7BQ9C0I4 1608 aa12.59□□□□□ -0.39
LINC00343-205ENST00000598229 TPTE2Q6XPS3 522 aa12.59□□□□□ -0.39
LINC00343-205ENST00000598229 USP50Q70EL3 339 aaPredicted RBP12.59□□□□□ -0.39
LINC00343-205ENST00000598229 DDX27Q96GQ7 796 aaKnown RBP12.59□□□□□ -0.39
LINC00343-205ENST00000598229 PANK3Q9H999 370 aa12.59□□□□□ -0.39
LINC00343-205ENST00000598229 A1BGP04217 495 aa12.58□□□□□ -0.4
LINC00343-205ENST00000598229 LMOD1P29536 600 aaPredicted RBP12.58□□□□□ -0.4
LINC00343-205ENST00000598229 BRPF1P55201 1214 aaPredicted RBP12.58□□□□□ -0.4
LINC00343-205ENST00000598229 GRIPAP1Q4V328 841 aa12.58□□□□□ -0.4
LINC00343-205ENST00000598229 CC2D2BQ6DHV5 1058 aa12.58□□□□□ -0.4
LINC00343-205ENST00000598229 PAXIP1Q6ZW49 1069 aaPredicted RBP12.58□□□□□ -0.4
LINC00343-205ENST00000598229 DZIP3Q86Y13 1208 aaKnown RBP12.58□□□□□ -0.4
LINC00343-205ENST00000598229 LARP6Q9BRS8 491 aaKnown RBP12.58□□□□□ -0.4
LINC00343-205ENST00000598229 ZNF330Q9Y3S2 320 aaPredicted RBP12.58□□□□□ -0.4
LINC00343-205ENST00000598229 TNRC18O15417 2968 aaPredicted RBP12.58□□□□□ -0.4
LINC00343-205ENST00000598229 ARFGEF2Q9Y6D5 1785 aa12.57□□□□□ -0.4
LINC00343-205ENST00000598229 EIF6P56537 245 aaKnown RBP12.57□□□□□ -0.4
LINC00343-205ENST00000598229 CFAP44Q96MT7 982 aa12.57□□□□□ -0.4
LINC00343-205ENST00000598229 FMNL2Q96PY5 1086 aa12.57□□□□□ -0.4
LINC00343-205ENST00000598229 ZNF652Q9Y2D9 606 aa12.57□□□□□ -0.4
LINC00343-205ENST00000598229 AOC2O75106 756 aa12.56□□□□□ -0.4
LINC00343-205ENST00000598229 EPS15P42566 896 aa12.56□□□□□ -0.4
LINC00343-205ENST00000598229 SCNN1DP51172 638 aa12.56□□□□□ -0.4
LINC00343-205ENST00000598229 FMR1Q06787 632 aaKnown RBP eCLIP12.56□□□□□ -0.4
LINC00343-205ENST00000598229 TEFQ10587 303 aa12.56□□□□□ -0.4
LINC00343-205ENST00000598229 DGKZQ13574 1117 aa12.56□□□□□ -0.4
LINC00343-205ENST00000598229 MFSD10Q14728 455 aa12.56□□□□□ -0.4
LINC00343-205ENST00000598229 OLFM4Q6UX06 510 aa12.56□□□□□ -0.4
LINC00343-205ENST00000598229 SAPCD2Q86UD0 394 aa12.56□□□□□ -0.4
LINC00343-205ENST00000598229 TSKSQ9UJT2 592 aa12.56□□□□□ -0.4
LINC00343-205ENST00000598229 SCN7AQ01118 1682 aa12.56□□□□□ -0.4
LINC00343-205ENST00000598229 UBR2Q8IWV8 1755 aa12.56□□□□□ -0.4
LINC00343-205ENST00000598229 HMOX1P09601 288 aa12.55□□□□□ -0.4
LINC00343-205ENST00000598229 FOSBP53539 338 aa12.55□□□□□ -0.4
LINC00343-205ENST00000598229 GRM1Q13255 1194 aa12.55□□□□□ -0.4
LINC00343-205ENST00000598229 IL17REQ8NFR9 667 aa12.55□□□□□ -0.4
LINC00343-205ENST00000598229 POLR3GLQ9BT43 218 aa12.55□□□□□ -0.4
LINC00343-205ENST00000598229 GJA3Q9Y6H8 435 aa12.55□□□□□ -0.4
LINC00343-205ENST00000598229 TRAF5O00463 557 aa12.54□□□□□ -0.4
LINC00343-205ENST00000598229 EVI5O60447 810 aa12.54□□□□□ -0.4
LINC00343-205ENST00000598229 SLC4A5Q9BY07 1137 aa12.54□□□□□ -0.4
LINC00343-205ENST00000598229 PGAP2Q9UHJ9 254 aa12.54□□□□□ -0.4
LINC00343-205ENST00000598229 TIMELESSQ9UNS1 1208 aa12.54□□□□□ -0.4
LINC00343-205ENST00000598229 SNED1Q8TER0 1413 aa12.54□□□□□ -0.4
LINC00343-205ENST00000598229 PDE4DIPQ5VU43 2346 aa12.53□□□□□ -0.4
LINC00343-205ENST00000598229 GNAT3A8MTJ3 354 aa12.53□□□□□ -0.4
LINC00343-205ENST00000598229 CRY2Q49AN0 593 aa12.53□□□□□ -0.4
LINC00343-205ENST00000598229 VPS9D1Q9Y2B5 631 aa12.53□□□□□ -0.4
LINC00343-205ENST00000598229 PTPREP23469 700 aa12.52□□□□□ -0.41
LINC00343-205ENST00000598229 HOXA10P31260 410 aaPredicted RBP12.52□□□□□ -0.41
LINC00343-205ENST00000598229 NOGQ13253 232 aa12.52□□□□□ -0.41
LINC00343-205ENST00000598229 PRPF38BQ5VTL8 546 aaKnown RBP12.52□□□□□ -0.41
LINC00343-205ENST00000598229 VPS33BQ9H267 617 aa12.52□□□□□ -0.41
LINC00343-205ENST00000598229 ADARB2Q9NS39 739 aaKnown RBP12.52□□□□□ -0.41
LINC00343-205ENST00000598229 NIP7Q9Y221 180 aaKnown RBP eCLIP12.52□□□□□ -0.41
LINC00343-205ENST00000598229 KNSTRNQ9Y448 316 aa12.52□□□□□ -0.41
LINC00343-205ENST00000598229 USP16Q9Y5T5 823 aa12.52□□□□□ -0.41
LINC00343-205ENST00000598229 LTBP1Q14766 1721 aa12.51□□□□□ -0.41
LINC00343-205ENST00000598229 DIAPH1O60610 1272 aaKnown RBP12.51□□□□□ -0.41
LINC00343-205ENST00000598229 CELF2O95319 508 aaKnown RBP12.51□□□□□ -0.41
LINC00343-205ENST00000598229 MAP3K9P80192 1104 aa12.51□□□□□ -0.41
LINC00343-205ENST00000598229 CIAPIN1Q6FI81 312 aa12.51□□□□□ -0.41
LINC00343-205ENST00000598229 LARGE2Q8N3Y3 721 aa12.51□□□□□ -0.41
LINC00343-205ENST00000598229 GAS2L2Q8NHY3 880 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms