RNA–Protein interactions for RNA: ENST00000597756.1

NOTCH3-204, Transcript of notch 3, humanhuman

TSL 2

Gene NOTCH3, Length 559 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-204ENST00000597756 CCDC93Q567U6 631 aa15.97■□□□□ 0.15
NOTCH3-204ENST00000597756 DDX46Q7L014 1031 aaKnown RBP15.97■□□□□ 0.15
NOTCH3-204ENST00000597756 GRAPLQ8TC17 118 aaPredicted RBP15.97■□□□□ 0.15
NOTCH3-204ENST00000597756 COL4A1P02462 1669 aa15.96■□□□□ 0.15
NOTCH3-204ENST00000597756 ALDH1L1O75891 902 aa15.96■□□□□ 0.15
NOTCH3-204ENST00000597756 GRIPAP1Q4V328 841 aa15.96■□□□□ 0.15
NOTCH3-204ENST00000597756 SP8Q8IXZ3 490 aa15.96■□□□□ 0.15
NOTCH3-204ENST00000597756 RTKN2Q8IZC4 609 aa15.96■□□□□ 0.15
NOTCH3-204ENST00000597756 BCL2L13Q9BXK5 485 aa15.96■□□□□ 0.15
NOTCH3-204ENST00000597756 ATP6V0A2Q9Y487 856 aa15.96■□□□□ 0.15
NOTCH3-204ENST00000597756 UBE3BQ7Z3V4 1068 aa15.95■□□□□ 0.14
NOTCH3-204ENST00000597756 SLC51AQ86UW1 340 aa15.95■□□□□ 0.14
NOTCH3-204ENST00000597756 TTLL11Q8NHH1 800 aa15.95■□□□□ 0.14
NOTCH3-204ENST00000597756 PSMD1Q99460 953 aa15.95■□□□□ 0.14
NOTCH3-204ENST00000597756 TAOK3Q9H2K8 898 aa15.95■□□□□ 0.14
NOTCH3-204ENST00000597756 SMC4Q9NTJ3 1288 aa15.95■□□□□ 0.14
NOTCH3-204ENST00000597756 PPEF1O14829 653 aaPredicted RBP15.94■□□□□ 0.14
NOTCH3-204ENST00000597756 CSF1RP07333 972 aa15.94■□□□□ 0.14
NOTCH3-204ENST00000597756 FKBP4Q02790 459 aaKnown RBP eCLIP15.94■□□□□ 0.14
NOTCH3-204ENST00000597756 TMC4Q7Z404 712 aa15.94■□□□□ 0.14
NOTCH3-204ENST00000597756 CELF1Q92879 486 aaKnown RBP15.94■□□□□ 0.14
NOTCH3-204ENST00000597756 SRCIN1Q9C0H9 1055 aa15.94■□□□□ 0.14
NOTCH3-204ENST00000597756 RNF181Q9P0P0 153 aa15.94■□□□□ 0.14
NOTCH3-204ENST00000597756 LRRC37AA6NMS7 1700 aa15.94■□□□□ 0.14
NOTCH3-204ENST00000597756 ZC3H4Q9UPT8 1303 aaKnown RBP15.94■□□□□ 0.14
NOTCH3-204ENST00000597756 RTL9Q8NET4 1388 aa15.93■□□□□ 0.14
NOTCH3-204ENST00000597756 RPS8P62241 208 aaKnown RBP15.93■□□□□ 0.14
NOTCH3-204ENST00000597756 CCDC152Q4G0S7 254 aa15.93■□□□□ 0.14
NOTCH3-204ENST00000597756 SEC31BQ9NQW1 1179 aa15.93■□□□□ 0.14
NOTCH3-204ENST00000597756 UTYO14607 1347 aa15.93■□□□□ 0.14
NOTCH3-204ENST00000597756 CTSWP56202 376 aa15.92■□□□□ 0.14
NOTCH3-204ENST00000597756 SLC4A10Q6U841 1118 aa15.92■□□□□ 0.14
NOTCH3-204ENST00000597756 ARHGAP45Q92619 1136 aa15.92■□□□□ 0.14
NOTCH3-204ENST00000597756 RTFDC1Q9BY42 306 aaPredicted RBP15.92■□□□□ 0.14
NOTCH3-204ENST00000597756 NOB1Q9ULX3 412 aaKnown RBP15.92■□□□□ 0.14
NOTCH3-204ENST00000597756 GRM8O00222 908 aa15.91■□□□□ 0.14
NOTCH3-204ENST00000597756 FOXO4P98177 505 aa15.91■□□□□ 0.14
NOTCH3-204ENST00000597756 KAZALD1Q96I82 304 aa15.9■□□□□ 0.14
NOTCH3-204ENST00000597756 LTBP1Q14766 1721 aa15.9■□□□□ 0.14
NOTCH3-204ENST00000597756 TIAM2Q8IVF5 1701 aa15.9■□□□□ 0.14
NOTCH3-204ENST00000597756 BCAR3O75815 825 aa15.89■□□□□ 0.13
NOTCH3-204ENST00000597756 EPHA10Q5JZY3 1008 aa15.89■□□□□ 0.13
NOTCH3-204ENST00000597756 API5Q9BZZ5 524 aaKnown RBP15.89■□□□□ 0.13
NOTCH3-204ENST00000597756 USP44Q9H0E7 712 aa15.89■□□□□ 0.13
NOTCH3-204ENST00000597756 VPS33BQ9H267 617 aa15.89■□□□□ 0.13
NOTCH3-204ENST00000597756 GREM2Q9H772 168 aa15.89■□□□□ 0.13
NOTCH3-204ENST00000597756 ZNF277Q9NRM2 450 aaPredicted RBP15.89■□□□□ 0.13
NOTCH3-204ENST00000597756 NBPF7P0C2Y1 421 aaPredicted RBP15.88■□□□□ 0.13
NOTCH3-204ENST00000597756 IARSP41252 1262 aaKnown RBP15.88■□□□□ 0.13
NOTCH3-204ENST00000597756 MPNDQ8N594 471 aa15.88■□□□□ 0.13
NOTCH3-204ENST00000597756 CCDC85AQ96PX6 553 aaPredicted RBP15.88■□□□□ 0.13
NOTCH3-204ENST00000597756 C9orf78Q9NZ63 289 aaPredicted RBP15.88■□□□□ 0.13
NOTCH3-204ENST00000597756 KIF16BQ96L93 1317 aa15.88■□□□□ 0.13
NOTCH3-204ENST00000597756 DUOX1Q9NRD9 1551 aa15.87■□□□□ 0.13
NOTCH3-204ENST00000597756 COL4A5P29400 1685 aa15.87■□□□□ 0.13
NOTCH3-204ENST00000597756 GLTPD2A6NH11 291 aa15.87■□□□□ 0.13
NOTCH3-204ENST00000597756 PODXL2Q9NZ53 605 aa15.87■□□□□ 0.13
NOTCH3-204ENST00000597756 FZD9O00144 591 aa15.86■□□□□ 0.13
NOTCH3-204ENST00000597756 CCT4P50991 539 aaKnown RBP15.86■□□□□ 0.13
NOTCH3-204ENST00000597756 INTS3Q68E01 1043 aaKnown RBP15.86■□□□□ 0.13
NOTCH3-204ENST00000597756 DPP8Q6V1X1 898 aaPredicted RBP15.86■□□□□ 0.13
NOTCH3-204ENST00000597756 ANKRD18AQ8IVF6 992 aa15.86■□□□□ 0.13
NOTCH3-204ENST00000597756 TMX4Q9H1E5 349 aaPredicted RBP15.86■□□□□ 0.13
NOTCH3-204ENST00000597756 BSDC1Q9NW68 430 aaPredicted RBP15.86■□□□□ 0.13
NOTCH3-204ENST00000597756 IPO8O15397 1037 aaKnown RBP15.85■□□□□ 0.13
NOTCH3-204ENST00000597756 ITGA6P23229 1130 aa15.85■□□□□ 0.13
NOTCH3-204ENST00000597756 GPSM2P81274 684 aa15.85■□□□□ 0.13
NOTCH3-204ENST00000597756 FAM161AQ3B820 660 aa15.85■□□□□ 0.13
NOTCH3-204ENST00000597756 RABL6Q3YEC7 729 aaPredicted RBP15.85■□□□□ 0.13
NOTCH3-204ENST00000597756 LMBR1LQ6UX01 489 aa15.85■□□□□ 0.13
NOTCH3-204ENST00000597756 SUPT20HQ8NEM7 779 aa15.85■□□□□ 0.13
NOTCH3-204ENST00000597756 SUCLG2Q96I99 432 aa15.85■□□□□ 0.13
NOTCH3-204ENST00000597756 CDC5LQ99459 802 aaKnown RBP15.85■□□□□ 0.13
NOTCH3-204ENST00000597756 GPBP1L1Q9HC44 474 aaPredicted RBP15.85■□□□□ 0.13
NOTCH3-204ENST00000597756 SPEF2Q9C093 1822 aa15.84■□□□□ 0.13
NOTCH3-204ENST00000597756 KIF3CO14782 793 aa15.84■□□□□ 0.13
NOTCH3-204ENST00000597756 TRIM27P14373 513 aa15.84■□□□□ 0.13
NOTCH3-204ENST00000597756 KIAA2012Q0VF49 1180 aa15.84■□□□□ 0.13
NOTCH3-204ENST00000597756 ATF7IPQ6VMQ6 1270 aa15.84■□□□□ 0.13
NOTCH3-204ENST00000597756 POLLQ9UGP5 575 aa15.84■□□□□ 0.13
NOTCH3-204ENST00000597756 MINPP1Q9UNW1 487 aa15.84■□□□□ 0.13
NOTCH3-204ENST00000597756 NSFL1CQ9UNZ2 370 aaKnown RBP15.84■□□□□ 0.13
NOTCH3-204ENST00000597756 POTECB2RU33 542 aa15.83■□□□□ 0.12
NOTCH3-204ENST00000597756 ANKRD44Q8N8A2 993 aa15.83■□□□□ 0.12
NOTCH3-204ENST00000597756 TBC1D16Q8TBP0 767 aa15.83■□□□□ 0.12
NOTCH3-204ENST00000597756 ZNF526Q8TF50 670 aaPredicted RBP15.83■□□□□ 0.12
NOTCH3-204ENST00000597756 TNNQ9UQP3 1299 aa15.83■□□□□ 0.12
NOTCH3-204ENST00000597756 KDM2BQ8NHM5 1336 aa15.83■□□□□ 0.12
NOTCH3-204ENST00000597756 WDR90Q96KV7 1748 aa15.82■□□□□ 0.12
NOTCH3-204ENST00000597756 DPY19L2Q6NUT2 758 aa15.82■□□□□ 0.12
NOTCH3-204ENST00000597756 LARGE2Q8N3Y3 721 aa15.82■□□□□ 0.12
NOTCH3-204ENST00000597756 JDP2Q8WYK2 163 aa15.82■□□□□ 0.12
NOTCH3-204ENST00000597756 NMRK2Q9NPI5 230 aa15.82■□□□□ 0.12
NOTCH3-204ENST00000597756 ANKRD18BA2A2Z9 1011 aa15.81■□□□□ 0.12
NOTCH3-204ENST00000597756 PPIP5K2O43314 1243 aa15.81■□□□□ 0.12
NOTCH3-204ENST00000597756 IFIT5Q13325 482 aaKnown RBP15.81■□□□□ 0.12
NOTCH3-204ENST00000597756 AOC3Q16853 763 aa15.81■□□□□ 0.12
NOTCH3-204ENST00000597756 ZKSCAN2Q63HK3 967 aa15.81■□□□□ 0.12
NOTCH3-204ENST00000597756 BICC1Q9H694 974 aaKnown RBP15.81■□□□□ 0.12
NOTCH3-204ENST00000597756 XDHP47989 1333 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms