RNA–Protein interactions for RNA: ENST00000597651.5

SOX2-OT-227, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 629 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-227ENST00000597651 COL13A1Q5TAT6 717 aaPredicted RBP17.62■□□□□ 0.41
SOX2-OT-227ENST00000597651 LARGE2Q8N3Y3 721 aa17.62■□□□□ 0.41
SOX2-OT-227ENST00000597651 JDP2Q8WYK2 163 aa17.62■□□□□ 0.41
SOX2-OT-227ENST00000597651 FAM89AQ96GI7 184 aa17.62■□□□□ 0.41
SOX2-OT-227ENST00000597651 CREBZFQ9NS37 354 aa17.62■□□□□ 0.41
SOX2-OT-227ENST00000597651 EPS15P42566 896 aa17.61■□□□□ 0.41
SOX2-OT-227ENST00000597651 FMR1Q06787 632 aaKnown RBP eCLIP17.61■□□□□ 0.41
SOX2-OT-227ENST00000597651 SP8Q8IXZ3 490 aa17.61■□□□□ 0.41
SOX2-OT-227ENST00000597651 TSPYL6Q8N831 410 aa17.61■□□□□ 0.41
SOX2-OT-227ENST00000597651 GJA3Q9Y6H8 435 aa17.61■□□□□ 0.41
SOX2-OT-227ENST00000597651 FANCIQ9NVI1 1328 aa17.61■□□□□ 0.41
SOX2-OT-227ENST00000597651 GRAPQ13588 217 aa17.6■□□□□ 0.41
SOX2-OT-227ENST00000597651 GRIPAP1Q4V328 841 aa17.6■□□□□ 0.41
SOX2-OT-227ENST00000597651 RTL5Q5HYW3 569 aaPredicted RBP17.6■□□□□ 0.41
SOX2-OT-227ENST00000597651 MAP1SQ66K74 1059 aaPredicted RBP17.6■□□□□ 0.41
SOX2-OT-227ENST00000597651 GRAPLQ8TC17 118 aaPredicted RBP17.6■□□□□ 0.41
SOX2-OT-227ENST00000597651 CELF1Q92879 486 aaKnown RBP17.6■□□□□ 0.41
SOX2-OT-227ENST00000597651 HYPKQ9NX55 129 aa17.6■□□□□ 0.41
SOX2-OT-227ENST00000597651 MKRN1Q9UHC7 482 aaKnown RBP17.6■□□□□ 0.41
SOX2-OT-227ENST00000597651 PPIP5K2O43314 1243 aa17.59■□□□□ 0.41
SOX2-OT-227ENST00000597651 BBOX1O75936 387 aa17.59■□□□□ 0.41
SOX2-OT-227ENST00000597651 HSPA1AP0DMV8 641 aaKnown RBP17.58■□□□□ 0.4
SOX2-OT-227ENST00000597651 HSPA1BP0DMV9 641 aaKnown RBP17.58■□□□□ 0.4
SOX2-OT-227ENST00000597651 EIF6P56537 245 aaKnown RBP17.58■□□□□ 0.4
SOX2-OT-227ENST00000597651 CXCL9Q07325 125 aa17.58■□□□□ 0.4
SOX2-OT-227ENST00000597651 TRIM28Q13263 835 aaKnown RBP17.58■□□□□ 0.4
SOX2-OT-227ENST00000597651 SF3B3Q15393 1217 aaKnown RBP17.58■□□□□ 0.4
SOX2-OT-227ENST00000597651 CNTNAP1P78357 1384 aa17.57■□□□□ 0.4
SOX2-OT-227ENST00000597651 YDJCA8MPS7 323 aa17.57■□□□□ 0.4
SOX2-OT-227ENST00000597651 DDX46Q7L014 1031 aaKnown RBP17.57■□□□□ 0.4
SOX2-OT-227ENST00000597651 CNTROBQ8N137 903 aa17.57■□□□□ 0.4
SOX2-OT-227ENST00000597651 KIAA2012Q0VF49 1180 aa17.56■□□□□ 0.4
SOX2-OT-227ENST00000597651 DPP8Q6V1X1 898 aaPredicted RBP17.56■□□□□ 0.4
SOX2-OT-227ENST00000597651 PNMA8AQ86V59 439 aaPredicted RBP17.56■□□□□ 0.4
SOX2-OT-227ENST00000597651 NIM1KQ8IY84 436 aa17.56■□□□□ 0.4
SOX2-OT-227ENST00000597651 MPNDQ8N594 471 aa17.56■□□□□ 0.4
SOX2-OT-227ENST00000597651 CLEC11AQ9Y240 323 aa17.56■□□□□ 0.4
SOX2-OT-227ENST00000597651 SHTN1A0MZ66 631 aa17.55■□□□□ 0.4
SOX2-OT-227ENST00000597651 JARID2Q92833 1246 aaPredicted RBP17.55■□□□□ 0.4
SOX2-OT-227ENST00000597651 VPS33BQ9H267 617 aa17.55■□□□□ 0.4
SOX2-OT-227ENST00000597651 MYH16Q9H6N6 1097 aa17.55■□□□□ 0.4
SOX2-OT-227ENST00000597651 ZNRF3Q9ULT6 936 aa17.55■□□□□ 0.4
SOX2-OT-227ENST00000597651 TMEM88BA6NKF7 163 aa17.54■□□□□ 0.4
SOX2-OT-227ENST00000597651 IRS4O14654 1257 aaPredicted RBP17.54■□□□□ 0.4
SOX2-OT-227ENST00000597651 GOLGA2Q08379 1002 aa17.54■□□□□ 0.4
SOX2-OT-227ENST00000597651 TWISTNBQ3B726 338 aaPredicted RBP17.54■□□□□ 0.4
SOX2-OT-227ENST00000597651 MYD88Q99836 296 aa17.54■□□□□ 0.4
SOX2-OT-227ENST00000597651 SEC31BQ9NQW1 1179 aa17.54■□□□□ 0.4
SOX2-OT-227ENST00000597651 GPRC5DQ9NZD1 345 aa17.54■□□□□ 0.4
SOX2-OT-227ENST00000597651 VEGFBP49765 207 aa17.53■□□□□ 0.4
SOX2-OT-227ENST00000597651 EXOSC9Q06265 439 aaKnown RBP17.53■□□□□ 0.4
SOX2-OT-227ENST00000597651 RIC3Q7Z5B4 369 aa17.53■□□□□ 0.4
SOX2-OT-227ENST00000597651 POLLQ9UGP5 575 aa17.53■□□□□ 0.4
SOX2-OT-227ENST00000597651 TRAF5O00463 557 aa17.52■□□□□ 0.4
SOX2-OT-227ENST00000597651 RAD17O75943 681 aa17.52■□□□□ 0.4
SOX2-OT-227ENST00000597651 GMPSP49915 693 aaPredicted RBP17.52■□□□□ 0.4
SOX2-OT-227ENST00000597651 HIRAP54198 1017 aaPredicted RBP17.52■□□□□ 0.4
SOX2-OT-227ENST00000597651 GPSM2P81274 684 aa17.52■□□□□ 0.4
SOX2-OT-227ENST00000597651 CCDC30Q5VVM6 783 aa17.52■□□□□ 0.4
SOX2-OT-227ENST00000597651 ZBTB38Q8NAP3 1195 aaPredicted RBP17.52■□□□□ 0.4
SOX2-OT-227ENST00000597651 SUPT20HQ8NEM7 779 aa17.52■□□□□ 0.4
SOX2-OT-227ENST00000597651 GPR101Q96P66 508 aaPredicted RBP17.52■□□□□ 0.4
SOX2-OT-227ENST00000597651 KCNQ5Q9NR82 932 aa17.52■□□□□ 0.4
SOX2-OT-227ENST00000597651 SCN9AQ15858 1988 aa17.51■□□□□ 0.39
SOX2-OT-227ENST00000597651 IGKV5-2P06315 115 aa17.51■□□□□ 0.39
SOX2-OT-227ENST00000597651 CST9Q5W186 159 aa17.51■□□□□ 0.39
SOX2-OT-227ENST00000597651 USP50Q70EL3 339 aaPredicted RBP17.51■□□□□ 0.39
SOX2-OT-227ENST00000597651 G2E3Q7L622 706 aa17.51■□□□□ 0.39
SOX2-OT-227ENST00000597651 METTL22Q9BUU2 404 aaPredicted RBP17.51■□□□□ 0.39
SOX2-OT-227ENST00000597651 RASSF10A6NK89 507 aa17.5■□□□□ 0.39
SOX2-OT-227ENST00000597651 E9PSI1 815 aa17.5■□□□□ 0.39
SOX2-OT-227ENST00000597651 VAMP4O75379 141 aa17.5■□□□□ 0.39
SOX2-OT-227ENST00000597651 LMOD1P29536 600 aaPredicted RBP17.5■□□□□ 0.39
SOX2-OT-227ENST00000597651 SLFN5Q08AF3 891 aa17.5■□□□□ 0.39
SOX2-OT-227ENST00000597651 CIAPIN1Q6FI81 312 aa17.5■□□□□ 0.39
SOX2-OT-227ENST00000597651 CDCA7LQ96GN5 454 aa17.5■□□□□ 0.39
SOX2-OT-227ENST00000597651 PCCAP05165 728 aaPredicted RBP17.49■□□□□ 0.39
SOX2-OT-227ENST00000597651 RPS8P62241 208 aaKnown RBP17.49■□□□□ 0.39
SOX2-OT-227ENST00000597651 TMC4Q7Z404 712 aa17.49■□□□□ 0.39
SOX2-OT-227ENST00000597651 CCDC191Q8NCU4 936 aa17.49■□□□□ 0.39
SOX2-OT-227ENST00000597651 TRPM4Q8TD43 1214 aa17.49■□□□□ 0.39
SOX2-OT-227ENST00000597651 CHMP4AQ9BY43 222 aa17.49■□□□□ 0.39
SOX2-OT-227ENST00000597651 TMX4Q9H1E5 349 aaPredicted RBP17.49■□□□□ 0.39
SOX2-OT-227ENST00000597651 ADARB2Q9NS39 739 aaKnown RBP17.49■□□□□ 0.39
SOX2-OT-227ENST00000597651 NSFL1CQ9UNZ2 370 aaKnown RBP17.49■□□□□ 0.39
SOX2-OT-227ENST00000597651 MAP3K2Q9Y2U5 619 aa17.49■□□□□ 0.39
SOX2-OT-227ENST00000597651 ZBTB12Q9Y330 459 aaPredicted RBP17.49■□□□□ 0.39
SOX2-OT-227ENST00000597651 TRPM7Q96QT4 1865 aa17.49■□□□□ 0.39
SOX2-OT-227ENST00000597651 RTL9Q8NET4 1388 aa17.49■□□□□ 0.39
SOX2-OT-227ENST00000597651 WTIPA6NIX2 430 aaPredicted RBP17.48■□□□□ 0.39
SOX2-OT-227ENST00000597651 FOXN1O15353 648 aa17.48■□□□□ 0.39
SOX2-OT-227ENST00000597651 TBC1D16Q8TBP0 767 aa17.48■□□□□ 0.39
SOX2-OT-227ENST00000597651 DBNDD1Q9H9R9 158 aa17.48■□□□□ 0.39
SOX2-OT-227ENST00000597651 PGAP2Q9UHJ9 254 aa17.48■□□□□ 0.39
SOX2-OT-227ENST00000597651 PI4KAP2A4QPH2 592 aa17.47■□□□□ 0.39
SOX2-OT-227ENST00000597651 PSMD14O00487 310 aa17.47■□□□□ 0.39
SOX2-OT-227ENST00000597651 RIMBP2O15034 1052 aa17.47■□□□□ 0.39
SOX2-OT-227ENST00000597651 EGFRP00533 1210 aa17.47■□□□□ 0.39
SOX2-OT-227ENST00000597651 WASHC4Q2M389 1173 aa17.47■□□□□ 0.39
SOX2-OT-227ENST00000597651 DLK2Q6UY11 383 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms