RNA–Protein interactions for RNA: ENST00000596644.5

IRF3-211, Transcript of interferon regulatory factor 3, humanhuman

TSL 2

Gene IRF3, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-211ENST00000596644 RTKN2Q8IZC4 609 aa18.99■□□□□ 0.63
IRF3-211ENST00000596644 GRAPLQ8TC17 118 aaPredicted RBP18.99■□□□□ 0.63
IRF3-211ENST00000596644 RNF181Q9P0P0 153 aa18.99■□□□□ 0.63
IRF3-211ENST00000596644 NOB1Q9ULX3 412 aaKnown RBP18.99■□□□□ 0.63
IRF3-211ENST00000596644 CCDC88AQ3V6T2 1871 aa18.99■□□□□ 0.63
IRF3-211ENST00000596644 KIF16BQ96L93 1317 aa18.99■□□□□ 0.63
IRF3-211ENST00000596644 BBOX1O75936 387 aa18.98■□□□□ 0.63
IRF3-211ENST00000596644 LMNB1P20700 586 aa18.98■□□□□ 0.63
IRF3-211ENST00000596644 BRPF1P55201 1214 aaPredicted RBP18.98■□□□□ 0.63
IRF3-211ENST00000596644 CC2D2BQ6DHV5 1058 aa18.98■□□□□ 0.63
IRF3-211ENST00000596644 CTSWP56202 376 aa18.97■□□□□ 0.63
IRF3-211ENST00000596644 CCDC85AQ96PX6 553 aaPredicted RBP18.97■□□□□ 0.63
IRF3-211ENST00000596644 API5Q9BZZ5 524 aaKnown RBP18.97■□□□□ 0.63
IRF3-211ENST00000596644 C9orf78Q9NZ63 289 aaPredicted RBP18.97■□□□□ 0.63
IRF3-211ENST00000596644 LTBP3Q9NS15 1303 aa18.97■□□□□ 0.63
IRF3-211ENST00000596644 GRM8O00222 908 aa18.96■□□□□ 0.63
IRF3-211ENST00000596644 FKBP4Q02790 459 aaKnown RBP eCLIP18.96■□□□□ 0.63
IRF3-211ENST00000596644 ATP6V0A2Q9Y487 856 aa18.96■□□□□ 0.63
IRF3-211ENST00000596644 TIAM2Q8IVF5 1701 aa18.95■□□□□ 0.62
IRF3-211ENST00000596644 CASP7P55210 303 aa18.95■□□□□ 0.62
IRF3-211ENST00000596644 GRIPAP1Q4V328 841 aa18.95■□□□□ 0.62
IRF3-211ENST00000596644 TMC4Q7Z404 712 aa18.95■□□□□ 0.62
IRF3-211ENST00000596644 CELF1Q92879 486 aaKnown RBP18.95■□□□□ 0.62
IRF3-211ENST00000596644 BCAR3O75815 825 aa18.94■□□□□ 0.62
IRF3-211ENST00000596644 SP8Q8IXZ3 490 aa18.94■□□□□ 0.62
IRF3-211ENST00000596644 ZNF784Q8NCA9 323 aaPredicted RBP18.94■□□□□ 0.62
IRF3-211ENST00000596644 TTLL11Q8NHH1 800 aa18.94■□□□□ 0.62
IRF3-211ENST00000596644 PLA2G12BQ9BX93 195 aa18.94■□□□□ 0.62
IRF3-211ENST00000596644 SEC31BQ9NQW1 1179 aa18.94■□□□□ 0.62
IRF3-211ENST00000596644 DICER1Q9UPY3 1922 aaKnown RBP18.94■□□□□ 0.62
IRF3-211ENST00000596644 IPO8O15397 1037 aaKnown RBP18.93■□□□□ 0.62
IRF3-211ENST00000596644 PRELPP51888 382 aa18.93■□□□□ 0.62
IRF3-211ENST00000596644 SLC51AQ86UW1 340 aa18.93■□□□□ 0.62
IRF3-211ENST00000596644 FRAT1Q92837 279 aaPredicted RBP18.93■□□□□ 0.62
IRF3-211ENST00000596644 SNED1Q8TER0 1413 aa18.92■□□□□ 0.62
IRF3-211ENST00000596644 COL4A1P02462 1669 aa18.92■□□□□ 0.62
IRF3-211ENST00000596644 LRRC37AA6NMS7 1700 aa18.92■□□□□ 0.62
IRF3-211ENST00000596644 CCT4P50991 539 aaKnown RBP18.92■□□□□ 0.62
IRF3-211ENST00000596644 RPS8P62241 208 aaKnown RBP18.92■□□□□ 0.62
IRF3-211ENST00000596644 ARHGAP45Q92619 1136 aa18.92■□□□□ 0.62
IRF3-211ENST00000596644 CDC5LQ99459 802 aaKnown RBP18.92■□□□□ 0.62
IRF3-211ENST00000596644 PSMD1Q99460 953 aa18.92■□□□□ 0.62
IRF3-211ENST00000596644 GREM2Q9H772 168 aa18.92■□□□□ 0.62
IRF3-211ENST00000596644 ZNF277Q9NRM2 450 aaPredicted RBP18.92■□□□□ 0.62
IRF3-211ENST00000596644 DPP8Q6V1X1 898 aaPredicted RBP18.91■□□□□ 0.62
IRF3-211ENST00000596644 ANKRD18AQ8IVF6 992 aa18.91■□□□□ 0.62
IRF3-211ENST00000596644 ZNF526Q8TF50 670 aaPredicted RBP18.91■□□□□ 0.62
IRF3-211ENST00000596644 ZC3H4Q9UPT8 1303 aaKnown RBP18.91■□□□□ 0.62
IRF3-211ENST00000596644 RTL9Q8NET4 1388 aa18.91■□□□□ 0.62
IRF3-211ENST00000596644 SPEF2Q9C093 1822 aa18.9■□□□□ 0.62
IRF3-211ENST00000596644 MPNDQ8N594 471 aa18.9■□□□□ 0.62
IRF3-211ENST00000596644 YTHDC1Q96MU7 727 aaKnown RBP18.9■□□□□ 0.62
IRF3-211ENST00000596644 CHMP3Q9Y3E7 222 aa18.9■□□□□ 0.62
IRF3-211ENST00000596644 NBPF7P0C2Y1 421 aaPredicted RBP18.89■□□□□ 0.61
IRF3-211ENST00000596644 IARSP41252 1262 aaKnown RBP18.89■□□□□ 0.61
IRF3-211ENST00000596644 FAM161AQ3B820 660 aa18.89■□□□□ 0.61
IRF3-211ENST00000596644 SUPT20HQ8NEM7 779 aa18.89■□□□□ 0.61
IRF3-211ENST00000596644 CSF1RP07333 972 aa18.88■□□□□ 0.61
IRF3-211ENST00000596644 ITGA6P23229 1130 aa18.88■□□□□ 0.61
IRF3-211ENST00000596644 FOXO4P98177 505 aa18.88■□□□□ 0.61
IRF3-211ENST00000596644 ZKSCAN2Q63HK3 967 aa18.88■□□□□ 0.61
IRF3-211ENST00000596644 ATF7IPQ6VMQ6 1270 aa18.88■□□□□ 0.61
IRF3-211ENST00000596644 SUCLG2Q96I99 432 aa18.88■□□□□ 0.61
IRF3-211ENST00000596644 GPBP1L1Q9HC44 474 aaPredicted RBP18.88■□□□□ 0.61
IRF3-211ENST00000596644 UTYO14607 1347 aa18.88■□□□□ 0.61
IRF3-211ENST00000596644 ANKRD18BA2A2Z9 1011 aa18.87■□□□□ 0.61
IRF3-211ENST00000596644 TRIM27P14373 513 aa18.87■□□□□ 0.61
IRF3-211ENST00000596644 IGHMBP2P38935 993 aaKnown RBP18.87■□□□□ 0.61
IRF3-211ENST00000596644 LMBR1LQ6UX01 489 aa18.87■□□□□ 0.61
IRF3-211ENST00000596644 NSFL1CQ9UNZ2 370 aaKnown RBP18.87■□□□□ 0.61
IRF3-211ENST00000596644 IFIT5Q13325 482 aaKnown RBP18.86■□□□□ 0.61
IRF3-211ENST00000596644 EPHA10Q5JZY3 1008 aa18.86■□□□□ 0.61
IRF3-211ENST00000596644 LARGE2Q8N3Y3 721 aa18.86■□□□□ 0.61
IRF3-211ENST00000596644 RTFDC1Q9BY42 306 aaPredicted RBP18.86■□□□□ 0.61
IRF3-211ENST00000596644 USP44Q9H0E7 712 aa18.86■□□□□ 0.61
IRF3-211ENST00000596644 KDM2BQ8NHM5 1336 aa18.85■□□□□ 0.61
IRF3-211ENST00000596644 PPIP5K2O43314 1243 aa18.85■□□□□ 0.61
IRF3-211ENST00000596644 GPSM2P81274 684 aa18.85■□□□□ 0.61
IRF3-211ENST00000596644 JDP2Q8WYK2 163 aa18.85■□□□□ 0.61
IRF3-211ENST00000596644 CLUAP1Q96AJ1 413 aa18.85■□□□□ 0.61
IRF3-211ENST00000596644 MPHOSPH8Q99549 860 aa18.85■□□□□ 0.61
IRF3-211ENST00000596644 ANKIB1Q9P2G1 1089 aa18.85■□□□□ 0.61
IRF3-211ENST00000596644 DUOX1Q9NRD9 1551 aa18.85■□□□□ 0.61
IRF3-211ENST00000596644 C6orf229H3BNL8 230 aa18.84■□□□□ 0.61
IRF3-211ENST00000596644 UBTFL1P0CB47 393 aaPredicted RBP18.84■□□□□ 0.61
IRF3-211ENST00000596644 AOC3Q16853 763 aa18.84■□□□□ 0.61
IRF3-211ENST00000596644 CCDC57Q2TAC2 916 aa18.84■□□□□ 0.61
IRF3-211ENST00000596644 TAF7LQ5H9L4 462 aa18.84■□□□□ 0.61
IRF3-211ENST00000596644 INTS3Q68E01 1043 aaKnown RBP18.84■□□□□ 0.61
IRF3-211ENST00000596644 BICC1Q9H694 974 aaKnown RBP18.84■□□□□ 0.61
IRF3-211ENST00000596644 BSDC1Q9NW68 430 aaPredicted RBP18.84■□□□□ 0.61
IRF3-211ENST00000596644 TNNQ9UQP3 1299 aa18.84■□□□□ 0.61
IRF3-211ENST00000596644 LTBP1Q14766 1721 aa18.83■□□□□ 0.61
IRF3-211ENST00000596644 DPY19L2Q6NUT2 758 aa18.83■□□□□ 0.6
IRF3-211ENST00000596644 FTSJ3Q8IY81 847 aaKnown RBP18.83■□□□□ 0.6
IRF3-211ENST00000596644 NIM1KQ8IY84 436 aa18.83■□□□□ 0.6
IRF3-211ENST00000596644 KAZALD1Q96I82 304 aa18.83■□□□□ 0.6
IRF3-211ENST00000596644 VPS33BQ9H267 617 aa18.83■□□□□ 0.6
IRF3-211ENST00000596644 XDHP47989 1333 aa18.82■□□□□ 0.6
IRF3-211ENST00000596644 GLTPD2A6NH11 291 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms