RNA–Protein interactions for RNA: ENST00000595874.1

SHKBP1-210, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 203 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-210ENST00000595874 FANCIQ9NVI1 1328 aa13.27□□□□□ -0.29
SHKBP1-210ENST00000595874 PI4KAP2A4QPH2 592 aa13.26□□□□□ -0.29
SHKBP1-210ENST00000595874 FZD9O00144 591 aa13.26□□□□□ -0.29
SHKBP1-210ENST00000595874 SLC4A2P04920 1241 aa13.26□□□□□ -0.29
SHKBP1-210ENST00000595874 EPHX2P34913 555 aa13.26□□□□□ -0.29
SHKBP1-210ENST00000595874 EXOSC9Q06265 439 aaKnown RBP13.26□□□□□ -0.29
SHKBP1-210ENST00000595874 CWF19L2Q2TBE0 894 aaKnown RBP13.26□□□□□ -0.29
SHKBP1-210ENST00000595874 CHADLQ6NUI6 762 aa13.26□□□□□ -0.29
SHKBP1-210ENST00000595874 PI4KAP1Q8N8J0 262 aa13.26□□□□□ -0.29
SHKBP1-210ENST00000595874 HACL1Q9UJ83 578 aa13.26□□□□□ -0.29
SHKBP1-210ENST00000595874 RAD17O75943 681 aa13.25□□□□□ -0.29
SHKBP1-210ENST00000595874 EPS15P42566 896 aa13.25□□□□□ -0.29
SHKBP1-210ENST00000595874 GPSM2P81274 684 aa13.25□□□□□ -0.29
SHKBP1-210ENST00000595874 FMR1Q06787 632 aaKnown RBP eCLIP13.25□□□□□ -0.29
SHKBP1-210ENST00000595874 MAP1SQ66K74 1059 aaPredicted RBP13.25□□□□□ -0.29
SHKBP1-210ENST00000595874 CC2D2BQ6DHV5 1058 aa13.25□□□□□ -0.29
SHKBP1-210ENST00000595874 SP8Q8IXZ3 490 aa13.25□□□□□ -0.29
SHKBP1-210ENST00000595874 DNAJC5GQ8N7S2 189 aa13.25□□□□□ -0.29
SHKBP1-210ENST00000595874 METTL22Q9BUU2 404 aaPredicted RBP13.25□□□□□ -0.29
SHKBP1-210ENST00000595874 MKRN1Q9UHC7 482 aaKnown RBP13.25□□□□□ -0.29
SHKBP1-210ENST00000595874 NSFL1CQ9UNZ2 370 aaKnown RBP13.25□□□□□ -0.29
SHKBP1-210ENST00000595874 SPEF2Q9C093 1822 aa13.25□□□□□ -0.29
SHKBP1-210ENST00000595874 LTBP1Q14766 1721 aa13.25□□□□□ -0.29
SHKBP1-210ENST00000595874 C6orf229H3BNL8 230 aa13.24□□□□□ -0.29
SHKBP1-210ENST00000595874 BBOX1O75936 387 aa13.24□□□□□ -0.29
SHKBP1-210ENST00000595874 DDX58O95786 925 aaKnown RBP13.24□□□□□ -0.29
SHKBP1-210ENST00000595874 DOK7Q18PE1 504 aa13.24□□□□□ -0.29
SHKBP1-210ENST00000595874 CWC25Q9NXE8 425 aaPredicted RBP13.24□□□□□ -0.29
SHKBP1-210ENST00000595874 SHTN1A0MZ66 631 aa13.23□□□□□ -0.29
SHKBP1-210ENST00000595874 IQCA1LA6NCM1 817 aa13.23□□□□□ -0.29
SHKBP1-210ENST00000595874 IGKV5-2P06315 115 aa13.23□□□□□ -0.29
SHKBP1-210ENST00000595874 LMOD1P29536 600 aaPredicted RBP13.23□□□□□ -0.29
SHKBP1-210ENST00000595874 CCDC27Q2M243 656 aa13.23□□□□□ -0.29
SHKBP1-210ENST00000595874 KSR2Q6VAB6 950 aa13.23□□□□□ -0.29
SHKBP1-210ENST00000595874 ZBTB38Q8NAP3 1195 aaPredicted RBP13.23□□□□□ -0.29
SHKBP1-210ENST00000595874 DBNDD1Q9H9R9 158 aa13.23□□□□□ -0.29
SHKBP1-210ENST00000595874 SCN4AP35499 1836 aa13.23□□□□□ -0.29
SHKBP1-210ENST00000595874 CXCL9Q07325 125 aa13.22□□□□□ -0.29
SHKBP1-210ENST00000595874 FKBP5Q13451 457 aaPredicted RBP13.22□□□□□ -0.29
SHKBP1-210ENST00000595874 GPC2Q8N158 579 aa13.22□□□□□ -0.29
SHKBP1-210ENST00000595874 SUPT20HQ8NEM7 779 aa13.22□□□□□ -0.29
SHKBP1-210ENST00000595874 KLRG1Q96E93 195 aa13.22□□□□□ -0.29
SHKBP1-210ENST00000595874 L3MBTL3Q96JM7 780 aaPredicted RBP13.22□□□□□ -0.29
SHKBP1-210ENST00000595874 DUOX1Q9NRD9 1551 aa13.22□□□□□ -0.29
SHKBP1-210ENST00000595874 YDJCA8MPS7 323 aa13.21□□□□□ -0.29
SHKBP1-210ENST00000595874 F6X3S4 739 aa13.21□□□□□ -0.29
SHKBP1-210ENST00000595874 PDE8AO60658 829 aa13.21□□□□□ -0.29
SHKBP1-210ENST00000595874 PCCAP05165 728 aaPredicted RBP13.21□□□□□ -0.29
SHKBP1-210ENST00000595874 GMPSP49915 693 aaPredicted RBP13.21□□□□□ -0.29
SHKBP1-210ENST00000595874 SCNN1DP51172 638 aa13.21□□□□□ -0.29
SHKBP1-210ENST00000595874 SF3B3Q15393 1217 aaKnown RBP13.21□□□□□ -0.29
SHKBP1-210ENST00000595874 LDHDQ86WU2 507 aa13.21□□□□□ -0.29
SHKBP1-210ENST00000595874 CCDC191Q8NCU4 936 aa13.21□□□□□ -0.29
SHKBP1-210ENST00000595874 BCL2L13Q9BXK5 485 aa13.21□□□□□ -0.29
SHKBP1-210ENST00000595874 KCNQ5Q9NR82 932 aa13.21□□□□□ -0.29
SHKBP1-210ENST00000595874 POLLQ9UGP5 575 aa13.21□□□□□ -0.29
SHKBP1-210ENST00000595874 ZBTB12Q9Y330 459 aaPredicted RBP13.21□□□□□ -0.29
SHKBP1-210ENST00000595874 WTIPA6NIX2 430 aaPredicted RBP13.2□□□□□ -0.3
SHKBP1-210ENST00000595874 VAMP4O75379 141 aa13.2□□□□□ -0.3
SHKBP1-210ENST00000595874 RPS8P62241 208 aaKnown RBP13.2□□□□□ -0.3
SHKBP1-210ENST00000595874 NEXNQ0ZGT2 675 aa13.2□□□□□ -0.3
SHKBP1-210ENST00000595874 FLIIQ13045 1269 aa13.2□□□□□ -0.3
SHKBP1-210ENST00000595874 UBE3BQ7Z3V4 1068 aa13.2□□□□□ -0.3
SHKBP1-210ENST00000595874 ZNRF3Q9ULT6 936 aa13.2□□□□□ -0.3
SHKBP1-210ENST00000595874 IL16Q14005 1332 aa13.19□□□□□ -0.3
SHKBP1-210ENST00000595874 NEURL1BA8MQ27 555 aa13.19□□□□□ -0.3
SHKBP1-210ENST00000595874 TRAF5O00463 557 aa13.19□□□□□ -0.3
SHKBP1-210ENST00000595874 UFL1O94874 794 aa13.19□□□□□ -0.3
SHKBP1-210ENST00000595874 KIAA2012Q0VF49 1180 aa13.19□□□□□ -0.3
SHKBP1-210ENST00000595874 GRM1Q13255 1194 aa13.19□□□□□ -0.3
SHKBP1-210ENST00000595874 TRIM28Q13263 835 aaKnown RBP13.19□□□□□ -0.3
SHKBP1-210ENST00000595874 WASHC4Q2M389 1173 aa13.19□□□□□ -0.3
SHKBP1-210ENST00000595874 CCDC152Q4G0S7 254 aa13.19□□□□□ -0.3
SHKBP1-210ENST00000595874 RBM26Q5T8P6 1007 aaKnown RBP13.19□□□□□ -0.3
SHKBP1-210ENST00000595874 CIAPIN1Q6FI81 312 aa13.19□□□□□ -0.3
SHKBP1-210ENST00000595874 WDR63Q8IWG1 891 aa13.19□□□□□ -0.3
SHKBP1-210ENST00000595874 RTFDC1Q9BY42 306 aaPredicted RBP13.19□□□□□ -0.3
SHKBP1-210ENST00000595874 ANKIB1Q9P2G1 1089 aa13.19□□□□□ -0.3
SHKBP1-210ENST00000595874 LRRC37AA6NMS7 1700 aa13.19□□□□□ -0.3
SHKBP1-210ENST00000595874 G3V3G9 751 aa13.18□□□□□ -0.3
SHKBP1-210ENST00000595874 ECE2O60344 883 aa13.18□□□□□ -0.3
SHKBP1-210ENST00000595874 DCAF8Q5TAQ9 597 aa13.18□□□□□ -0.3
SHKBP1-210ENST00000595874 DLK2Q6UY11 383 aa13.18□□□□□ -0.3
SHKBP1-210ENST00000595874 CNTROBQ8N137 903 aa13.18□□□□□ -0.3
SHKBP1-210ENST00000595874 TBC1D16Q8TBP0 767 aa13.18□□□□□ -0.3
SHKBP1-210ENST00000595874 FBXW7Q969H0 707 aa13.18□□□□□ -0.3
SHKBP1-210ENST00000595874 GREM2Q9H772 168 aa13.18□□□□□ -0.3
SHKBP1-210ENST00000595874 CHMP3Q9Y3E7 222 aa13.18□□□□□ -0.3
SHKBP1-210ENST00000595874 CEP350Q5VT06 3117 aa13.18□□□□□ -0.3
SHKBP1-210ENST00000595874 ADAMTSL1Q8N6G6 1762 aa13.17□□□□□ -0.3
SHKBP1-210ENST00000595874 PSMD14O00487 310 aa13.17□□□□□ -0.3
SHKBP1-210ENST00000595874 ITGBL1O95965 494 aaPredicted RBP13.17□□□□□ -0.3
SHKBP1-210ENST00000595874 CTSWP56202 376 aa13.17□□□□□ -0.3
SHKBP1-210ENST00000595874 GRIPAP1Q4V328 841 aa13.17□□□□□ -0.3
SHKBP1-210ENST00000595874 SLC4A10Q6U841 1118 aa13.17□□□□□ -0.3
SHKBP1-210ENST00000595874 ANKRD18AQ8IVF6 992 aa13.17□□□□□ -0.3
SHKBP1-210ENST00000595874 TRPM4Q8TD43 1214 aa13.17□□□□□ -0.3
SHKBP1-210ENST00000595874 DNAAF4Q8WXU2 420 aa13.17□□□□□ -0.3
SHKBP1-210ENST00000595874 ZNF408Q9H9D4 720 aa13.17□□□□□ -0.3
SHKBP1-210ENST00000595874 PAXIP1Q6ZW49 1069 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms