RNA–Protein interactions for RNA: ENST00000595792.1

PNKP-206, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 645 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-206ENST00000595792 CACNA1FO60840 1977 aa23.08■■□□□ 1.29
PNKP-206ENST00000595792 GRAPQ13588 217 aa23.07■■□□□ 1.28
PNKP-206ENST00000595792 GRAPLQ8TC17 118 aaPredicted RBP23.07■■□□□ 1.28
PNKP-206ENST00000595792 MKRN1Q9UHC7 482 aaKnown RBP23.07■■□□□ 1.28
PNKP-206ENST00000595792 SCNN1DP51172 638 aa23.06■■□□□ 1.28
PNKP-206ENST00000595792 MAP1SQ66K74 1059 aaPredicted RBP23.06■■□□□ 1.28
PNKP-206ENST00000595792 DPP8Q6V1X1 898 aaPredicted RBP23.06■■□□□ 1.28
PNKP-206ENST00000595792 TMX4Q9H1E5 349 aaPredicted RBP23.06■■□□□ 1.28
PNKP-206ENST00000595792 CREBZFQ9NS37 354 aa23.06■■□□□ 1.28
PNKP-206ENST00000595792 BBOX1O75936 387 aa23.05■■□□□ 1.28
PNKP-206ENST00000595792 ITGBL1O95965 494 aaPredicted RBP23.05■■□□□ 1.28
PNKP-206ENST00000595792 SP8Q8IXZ3 490 aa23.05■■□□□ 1.28
PNKP-206ENST00000595792 RTFDC1Q9BY42 306 aaPredicted RBP23.05■■□□□ 1.28
PNKP-206ENST00000595792 EPS15P42566 896 aa23.04■■□□□ 1.28
PNKP-206ENST00000595792 GOLGA2Q08379 1002 aa23.04■■□□□ 1.28
PNKP-206ENST00000595792 RIC3Q7Z5B4 369 aa23.04■■□□□ 1.28
PNKP-206ENST00000595792 MPNDQ8N594 471 aa23.04■■□□□ 1.28
PNKP-206ENST00000595792 CELF1Q92879 486 aaKnown RBP23.04■■□□□ 1.28
PNKP-206ENST00000595792 SALL2Q9Y467 1007 aaPredicted RBP23.04■■□□□ 1.28
PNKP-206ENST00000595792 NCBP3Q53F19 620 aaKnown RBP23.03■■□□□ 1.28
PNKP-206ENST00000595792 HSPA1AP0DMV8 641 aaKnown RBP23.02■■□□□ 1.28
PNKP-206ENST00000595792 HSPA1BP0DMV9 641 aaKnown RBP23.02■■□□□ 1.28
PNKP-206ENST00000595792 LMOD1P29536 600 aaPredicted RBP23.02■■□□□ 1.28
PNKP-206ENST00000595792 PNMA8AQ86V59 439 aaPredicted RBP23.02■■□□□ 1.28
PNKP-206ENST00000595792 MYD88Q99836 296 aa23.02■■□□□ 1.28
PNKP-206ENST00000595792 IRS4O14654 1257 aaPredicted RBP23.01■■□□□ 1.27
PNKP-206ENST00000595792 CXCL9Q07325 125 aa23.01■■□□□ 1.27
PNKP-206ENST00000595792 COL13A1Q5TAT6 717 aaPredicted RBP23.01■■□□□ 1.27
PNKP-206ENST00000595792 FAM9BQ8IZU0 186 aa23.01■■□□□ 1.27
PNKP-206ENST00000595792 CNTROBQ8N137 903 aa23.01■■□□□ 1.27
PNKP-206ENST00000595792 SUPT20HQ8NEM7 779 aa23.01■■□□□ 1.27
PNKP-206ENST00000595792 JARID2Q92833 1246 aaPredicted RBP23.01■■□□□ 1.27
PNKP-206ENST00000595792 IL16Q14005 1332 aa23.01■■□□□ 1.27
PNKP-206ENST00000595792 FMR1Q06787 632 aaKnown RBP eCLIP23■■□□□ 1.27
PNKP-206ENST00000595792 KIAA2012Q0VF49 1180 aa23■■□□□ 1.27
PNKP-206ENST00000595792 SF3B3Q15393 1217 aaKnown RBP23■■□□□ 1.27
PNKP-206ENST00000595792 SPINK5Q9NQ38 1064 aaPredicted RBP23■■□□□ 1.27
PNKP-206ENST00000595792 ZNRF3Q9ULT6 936 aa23■■□□□ 1.27
PNKP-206ENST00000595792 CNTNAP1P78357 1384 aa23■■□□□ 1.27
PNKP-206ENST00000595792 TRIM28Q13263 835 aaKnown RBP22.99■■□□□ 1.27
PNKP-206ENST00000595792 TMEM88BA6NKF7 163 aa22.98■■□□□ 1.27
PNKP-206ENST00000595792 RAD17O75943 681 aa22.98■■□□□ 1.27
PNKP-206ENST00000595792 CCDC30Q5VVM6 783 aa22.98■■□□□ 1.27
PNKP-206ENST00000595792 VPS33BQ9H267 617 aa22.98■■□□□ 1.27
PNKP-206ENST00000595792 FANCIQ9NVI1 1328 aa22.98■■□□□ 1.27
PNKP-206ENST00000595792 MYH3P11055 1940 aa22.98■■□□□ 1.27
PNKP-206ENST00000595792 YDJCA8MPS7 323 aa22.97■■□□□ 1.27
PNKP-206ENST00000595792 GMPSP49915 693 aaPredicted RBP22.97■■□□□ 1.27
PNKP-206ENST00000595792 ZBTB38Q8NAP3 1195 aaPredicted RBP22.97■■□□□ 1.27
PNKP-206ENST00000595792 GPR101Q96P66 508 aaPredicted RBP22.97■■□□□ 1.27
PNKP-206ENST00000595792 GPRC5DQ9NZD1 345 aa22.97■■□□□ 1.27
PNKP-206ENST00000595792 GPSM2P81274 684 aa22.96■■□□□ 1.27
PNKP-206ENST00000595792 TWISTNBQ3B726 338 aaPredicted RBP22.96■■□□□ 1.27
PNKP-206ENST00000595792 G2E3Q7L622 706 aa22.96■■□□□ 1.27
PNKP-206ENST00000595792 SEC31BQ9NQW1 1179 aa22.96■■□□□ 1.27
PNKP-206ENST00000595792 NSFL1CQ9UNZ2 370 aaKnown RBP22.96■■□□□ 1.27
PNKP-206ENST00000595792 CIAPIN1Q6FI81 312 aa22.95■■□□□ 1.26
PNKP-206ENST00000595792 TMC4Q7Z404 712 aa22.95■■□□□ 1.26
PNKP-206ENST00000595792 WDR63Q8IWG1 891 aa22.95■■□□□ 1.26
PNKP-206ENST00000595792 CCDC85AQ96PX6 553 aaPredicted RBP22.95■■□□□ 1.26
PNKP-206ENST00000595792 MAP3K2Q9Y2U5 619 aa22.95■■□□□ 1.26
PNKP-206ENST00000595792 SHTN1A0MZ66 631 aa22.94■■□□□ 1.26
PNKP-206ENST00000595792 TRAF5O00463 557 aa22.94■■□□□ 1.26
PNKP-206ENST00000595792 RIMBP2O15034 1052 aa22.94■■□□□ 1.26
PNKP-206ENST00000595792 USP50Q70EL3 339 aaPredicted RBP22.94■■□□□ 1.26
PNKP-206ENST00000595792 METTL22Q9BUU2 404 aaPredicted RBP22.94■■□□□ 1.26
PNKP-206ENST00000595792 VEGFBP49765 207 aa22.93■■□□□ 1.26
PNKP-206ENST00000595792 CCDC191Q8NCU4 936 aa22.93■■□□□ 1.26
PNKP-206ENST00000595792 DBNDD1Q9H9R9 158 aa22.93■■□□□ 1.26
PNKP-206ENST00000595792 ADARB2Q9NS39 739 aaKnown RBP22.93■■□□□ 1.26
PNKP-206ENST00000595792 CWC25Q9NXE8 425 aaPredicted RBP22.93■■□□□ 1.26
PNKP-206ENST00000595792 POLLQ9UGP5 575 aa22.93■■□□□ 1.26
PNKP-206ENST00000595792 C6orf229H3BNL8 230 aa22.92■■□□□ 1.26
PNKP-206ENST00000595792 DDX58O95786 925 aaKnown RBP22.92■■□□□ 1.26
PNKP-206ENST00000595792 PCCAP05165 728 aaPredicted RBP22.92■■□□□ 1.26
PNKP-206ENST00000595792 SPEF2Q9C093 1822 aa22.92■■□□□ 1.26
PNKP-206ENST00000595792 PI4KAP2A4QPH2 592 aa22.91■■□□□ 1.26
PNKP-206ENST00000595792 VAMP4O75379 141 aa22.91■■□□□ 1.26
PNKP-206ENST00000595792 IGKV5-2P06315 115 aa22.91■■□□□ 1.26
PNKP-206ENST00000595792 RPS8P62241 208 aaKnown RBP22.91■■□□□ 1.26
PNKP-206ENST00000595792 EXOSC9Q06265 439 aaKnown RBP22.91■■□□□ 1.26
PNKP-206ENST00000595792 WASHC4Q2M389 1173 aa22.91■■□□□ 1.26
PNKP-206ENST00000595792 PI4KAP1Q8N8J0 262 aa22.91■■□□□ 1.26
PNKP-206ENST00000595792 BCL2L13Q9BXK5 485 aa22.91■■□□□ 1.26
PNKP-206ENST00000595792 ZBTB12Q9Y330 459 aaPredicted RBP22.91■■□□□ 1.26
PNKP-206ENST00000595792 DOK7Q18PE1 504 aa22.9■■□□□ 1.26
PNKP-206ENST00000595792 TRPM4Q8TD43 1214 aa22.9■■□□□ 1.26
PNKP-206ENST00000595792 ABT1Q9ULW3 272 aaKnown RBP22.9■■□□□ 1.26
PNKP-206ENST00000595792 ZNF521Q96K83 1311 aa22.89■■□□□ 1.26
PNKP-206ENST00000595792 PDE8AO60658 829 aa22.89■■□□□ 1.25
PNKP-206ENST00000595792 TNIP1Q15025 636 aa22.89■■□□□ 1.25
PNKP-206ENST00000595792 KSR2Q6VAB6 950 aa22.89■■□□□ 1.25
PNKP-206ENST00000595792 TBC1D16Q8TBP0 767 aa22.89■■□□□ 1.25
PNKP-206ENST00000595792 STK31Q9BXU1 1019 aa22.89■■□□□ 1.25
PNKP-206ENST00000595792 KCNQ5Q9NR82 932 aa22.89■■□□□ 1.25
PNKP-206ENST00000595792 TRPM7Q96QT4 1865 aa22.89■■□□□ 1.25
PNKP-206ENST00000595792 RASSF10A6NK89 507 aa22.88■■□□□ 1.25
PNKP-206ENST00000595792 PSMD14O00487 310 aa22.88■■□□□ 1.25
PNKP-206ENST00000595792 SLC4A2P04920 1241 aa22.88■■□□□ 1.25
PNKP-206ENST00000595792 HIRAP54198 1017 aaPredicted RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms