RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 TAOK3Q9H2K8 898 aa27.86■■■□□ 2.05
HOMER3-206ENST00000594439 MYH3P11055 1940 aa27.86■■■□□ 2.05
HOMER3-206ENST00000594439 COL4A1P02462 1669 aa27.85■■■□□ 2.05
HOMER3-206ENST00000594439 DICER1Q9UPY3 1922 aaKnown RBP27.85■■■□□ 2.05
HOMER3-206ENST00000594439 RARSP54136 660 aaKnown RBP27.85■■■□□ 2.05
HOMER3-206ENST00000594439 CASP7P55210 303 aa27.85■■■□□ 2.05
HOMER3-206ENST00000594439 CC2D2BQ6DHV5 1058 aa27.85■■■□□ 2.05
HOMER3-206ENST00000594439 UBE3BQ7Z3V4 1068 aa27.85■■■□□ 2.05
HOMER3-206ENST00000594439 BBOX1O75936 387 aa27.84■■■□□ 2.05
HOMER3-206ENST00000594439 BRPF1P55201 1214 aaPredicted RBP27.84■■■□□ 2.05
HOMER3-206ENST00000594439 RTKN2Q8IZC4 609 aa27.84■■■□□ 2.05
HOMER3-206ENST00000594439 FKBP4Q02790 459 aaKnown RBP eCLIP27.83■■■□□ 2.05
HOMER3-206ENST00000594439 SLC4A10Q6U841 1118 aa27.83■■■□□ 2.05
HOMER3-206ENST00000594439 ATP6V0A2Q9Y487 856 aa27.83■■■□□ 2.05
HOMER3-206ENST00000594439 TIAM2Q8IVF5 1701 aa27.82■■■□□ 2.04
HOMER3-206ENST00000594439 ALDH1L1O75891 902 aa27.82■■■□□ 2.04
HOMER3-206ENST00000594439 CELF1Q92879 486 aaKnown RBP27.82■■■□□ 2.04
HOMER3-206ENST00000594439 SRCIN1Q9C0H9 1055 aa27.81■■■□□ 2.04
HOMER3-206ENST00000594439 CTSWP56202 376 aa27.8■■■□□ 2.04
HOMER3-206ENST00000594439 CCDC152Q4G0S7 254 aa27.8■■■□□ 2.04
HOMER3-206ENST00000594439 SP8Q8IXZ3 490 aa27.8■■■□□ 2.04
HOMER3-206ENST00000594439 PLA2G12BQ9BX93 195 aa27.8■■■□□ 2.04
HOMER3-206ENST00000594439 LRRC37AA6NMS7 1700 aa27.8■■■□□ 2.04
HOMER3-206ENST00000594439 GRIPAP1Q4V328 841 aa27.79■■■□□ 2.04
HOMER3-206ENST00000594439 TTLL11Q8NHH1 800 aa27.79■■■□□ 2.04
HOMER3-206ENST00000594439 PSMD1Q99460 953 aa27.79■■■□□ 2.04
HOMER3-206ENST00000594439 SEC31BQ9NQW1 1179 aa27.79■■■□□ 2.04
HOMER3-206ENST00000594439 TMC4Q7Z404 712 aa27.78■■■□□ 2.04
HOMER3-206ENST00000594439 CCDC85AQ96PX6 553 aaPredicted RBP27.78■■■□□ 2.04
HOMER3-206ENST00000594439 NOB1Q9ULX3 412 aaKnown RBP27.78■■■□□ 2.04
HOMER3-206ENST00000594439 ZC3H4Q9UPT8 1303 aaKnown RBP27.77■■■□□ 2.04
HOMER3-206ENST00000594439 GRM8O00222 908 aa27.77■■■□□ 2.04
HOMER3-206ENST00000594439 ZNF277Q9NRM2 450 aaPredicted RBP27.77■■■□□ 2.04
HOMER3-206ENST00000594439 RPS8P62241 208 aaKnown RBP27.76■■■□□ 2.03
HOMER3-206ENST00000594439 RTL9Q8NET4 1388 aa27.75■■■□□ 2.03
HOMER3-206ENST00000594439 ZNF526Q8TF50 670 aaPredicted RBP27.75■■■□□ 2.03
HOMER3-206ENST00000594439 TMX4Q9H1E5 349 aaPredicted RBP27.75■■■□□ 2.03
HOMER3-206ENST00000594439 GREM2Q9H772 168 aa27.74■■■□□ 2.03
HOMER3-206ENST00000594439 C9orf78Q9NZ63 289 aaPredicted RBP27.74■■■□□ 2.03
HOMER3-206ENST00000594439 KIF16BQ96L93 1317 aa27.73■■■□□ 2.03
HOMER3-206ENST00000594439 CSF1RP07333 972 aa27.73■■■□□ 2.03
HOMER3-206ENST00000594439 IARSP41252 1262 aaKnown RBP27.73■■■□□ 2.03
HOMER3-206ENST00000594439 API5Q9BZZ5 524 aaKnown RBP27.73■■■□□ 2.03
HOMER3-206ENST00000594439 BCAR3O75815 825 aa27.72■■■□□ 2.03
HOMER3-206ENST00000594439 FOXO4P98177 505 aa27.72■■■□□ 2.03
HOMER3-206ENST00000594439 MPNDQ8N594 471 aa27.72■■■□□ 2.03
HOMER3-206ENST00000594439 GPBP1L1Q9HC44 474 aaPredicted RBP27.72■■■□□ 2.03
HOMER3-206ENST00000594439 UTYO14607 1347 aa27.71■■■□□ 2.03
HOMER3-206ENST00000594439 RTFDC1Q9BY42 306 aaPredicted RBP27.71■■■□□ 2.03
HOMER3-206ENST00000594439 DUOX1Q9NRD9 1551 aa27.71■■■□□ 2.03
HOMER3-206ENST00000594439 LTBP1Q14766 1721 aa27.7■■■□□ 2.03
HOMER3-206ENST00000594439 SPEF2Q9C093 1822 aa27.7■■■□□ 2.02
HOMER3-206ENST00000594439 DPP8Q6V1X1 898 aaPredicted RBP27.7■■■□□ 2.02
HOMER3-206ENST00000594439 ARHGAP45Q92619 1136 aa27.7■■■□□ 2.02
HOMER3-206ENST00000594439 COL4A5P29400 1685 aa27.69■■■□□ 2.02
HOMER3-206ENST00000594439 NBPF7P0C2Y1 421 aaPredicted RBP27.69■■■□□ 2.02
HOMER3-206ENST00000594439 FAM161AQ3B820 660 aa27.69■■■□□ 2.02
HOMER3-206ENST00000594439 EPHA10Q5JZY3 1008 aa27.69■■■□□ 2.02
HOMER3-206ENST00000594439 ANKRD18AQ8IVF6 992 aa27.69■■■□□ 2.02
HOMER3-206ENST00000594439 CDC5LQ99459 802 aaKnown RBP27.69■■■□□ 2.02
HOMER3-206ENST00000594439 CCT4P50991 539 aaKnown RBP27.67■■■□□ 2.02
HOMER3-206ENST00000594439 GPSM2P81274 684 aa27.67■■■□□ 2.02
HOMER3-206ENST00000594439 SUPT20HQ8NEM7 779 aa27.67■■■□□ 2.02
HOMER3-206ENST00000594439 KAZALD1Q96I82 304 aa27.67■■■□□ 2.02
HOMER3-206ENST00000594439 SUCLG2Q96I99 432 aa27.67■■■□□ 2.02
HOMER3-206ENST00000594439 GLTPD2A6NH11 291 aa27.66■■■□□ 2.02
HOMER3-206ENST00000594439 ITGA6P23229 1130 aa27.66■■■□□ 2.02
HOMER3-206ENST00000594439 USP44Q9H0E7 712 aa27.66■■■□□ 2.02
HOMER3-206ENST00000594439 KDM2BQ8NHM5 1336 aa27.66■■■□□ 2.02
HOMER3-206ENST00000594439 LMBR1LQ6UX01 489 aa27.65■■■□□ 2.02
HOMER3-206ENST00000594439 VPS33BQ9H267 617 aa27.65■■■□□ 2.02
HOMER3-206ENST00000594439 NSFL1CQ9UNZ2 370 aaKnown RBP27.65■■■□□ 2.02
HOMER3-206ENST00000594439 IPO8O15397 1037 aaKnown RBP27.64■■■□□ 2.02
HOMER3-206ENST00000594439 LARGE2Q8N3Y3 721 aa27.64■■■□□ 2.02
HOMER3-206ENST00000594439 NMRK2Q9NPI5 230 aa27.64■■■□□ 2.02
HOMER3-206ENST00000594439 PPIP5K2O43314 1243 aa27.63■■■□□ 2.01
HOMER3-206ENST00000594439 AOC3Q16853 763 aa27.63■■■□□ 2.01
HOMER3-206ENST00000594439 JDP2Q8WYK2 163 aa27.63■■■□□ 2.01
HOMER3-206ENST00000594439 FRAT1Q92837 279 aaPredicted RBP27.63■■■□□ 2.01
HOMER3-206ENST00000594439 BSDC1Q9NW68 430 aaPredicted RBP27.63■■■□□ 2.01
HOMER3-206ENST00000594439 PODXL2Q9NZ53 605 aa27.63■■■□□ 2.01
HOMER3-206ENST00000594439 FZD9O00144 591 aa27.62■■■□□ 2.01
HOMER3-206ENST00000594439 TRIM27P14373 513 aa27.62■■■□□ 2.01
HOMER3-206ENST00000594439 ATF7IPQ6VMQ6 1270 aa27.62■■■□□ 2.01
HOMER3-206ENST00000594439 POLLQ9UGP5 575 aa27.62■■■□□ 2.01
HOMER3-206ENST00000594439 TNNQ9UQP3 1299 aa27.62■■■□□ 2.01
HOMER3-206ENST00000594439 CHMP3Q9Y3E7 222 aa27.62■■■□□ 2.01
HOMER3-206ENST00000594439 ANKRD18BA2A2Z9 1011 aa27.61■■■□□ 2.01
HOMER3-206ENST00000594439 KIF3CO14782 793 aa27.61■■■□□ 2.01
HOMER3-206ENST00000594439 IGHMBP2P38935 993 aaKnown RBP27.61■■■□□ 2.01
HOMER3-206ENST00000594439 KIAA2012Q0VF49 1180 aa27.61■■■□□ 2.01
HOMER3-206ENST00000594439 DPY19L2Q6NUT2 758 aa27.61■■■□□ 2.01
HOMER3-206ENST00000594439 ZNF541Q9H0D2 1346 aa27.61■■■□□ 2.01
HOMER3-206ENST00000594439 WDR90Q96KV7 1748 aa27.61■■■□□ 2.01
HOMER3-206ENST00000594439 IFIT5Q13325 482 aaKnown RBP27.6■■■□□ 2.01
HOMER3-206ENST00000594439 INTS3Q68E01 1043 aaKnown RBP27.6■■■□□ 2.01
HOMER3-206ENST00000594439 TBC1D16Q8TBP0 767 aa27.6■■■□□ 2.01
HOMER3-206ENST00000594439 MINPP1Q9UNW1 487 aa27.6■■■□□ 2.01
HOMER3-206ENST00000594439 RABL6Q3YEC7 729 aaPredicted RBP27.59■■■□□ 2.01
HOMER3-206ENST00000594439 ZKSCAN2Q63HK3 967 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms